BLASTX nr result

ID: Alisma22_contig00039748 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00039748
         (401 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory...   101   2e-22
YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory...   101   3e-22
CDM82313.1 unnamed protein product [Triticum aestivum]                 70   1e-13
CDM81530.1 unnamed protein product [Triticum aestivum]                 67   2e-12
YP_008992354.1 hypothetical protein Salmi_Mp138 (mitochondrion) ...    66   2e-11
AGC78957.1 hypothetical protein (mitochondrion) [Vicia faba]           58   2e-08
CDM87129.1 unnamed protein product [Triticum aestivum]                 55   6e-08

>YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
            AMQ23370.1 NADH dehydrogenase subunit 4 (mitochondrion)
            [Oryza minuta]
          Length = 2992

 Score =  101 bits (252), Expect = 2e-22
 Identities = 53/86 (61%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
 Frame = -3

Query: 261  K*SLDQPSAPTTCYDGHSKTWRMMAHPTRRALMSYGN-SWLKSLWF*GG-GRNNKNQSPG 88
            K SL QP  PTT YDGHSKTWRM AHPT+  L   G   W +SLWF        KN SPG
Sbjct: 2866 KLSLYQPCVPTTWYDGHSKTWRMRAHPTQERLCHMGTLGWKQSLWFSYPVSIIRKNLSPG 2925

Query: 87   WLVSLVMGDSPAWFGEHFSG*RLIFC 10
            WLVSLV+GD  AWFGEH  G RL+FC
Sbjct: 2926 WLVSLVIGDYLAWFGEHLLGLRLVFC 2951


>YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
            AMQ23374.1 NADH dehydrogenase subunit 4 (mitochondrion)
            [Oryza minuta]
          Length = 2992

 Score =  101 bits (251), Expect = 3e-22
 Identities = 53/86 (61%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
 Frame = -3

Query: 261  K*SLDQPSAPTTCYDGHSKTWRMMAHPTRRALMSYGN-SWLKSLWF*GGGRN-NKNQSPG 88
            K SL QP  PTT YDGHSKTWRM AHPT+  L   G   W +SLWF        KN SPG
Sbjct: 2866 KLSLYQPCVPTTWYDGHSKTWRMRAHPTQERLCHMGTLGWKQSLWFSYPVTIIRKNLSPG 2925

Query: 87   WLVSLVMGDSPAWFGEHFSG*RLIFC 10
            WLVSLV+GD  AWFGEH  G RL+FC
Sbjct: 2926 WLVSLVIGDYLAWFGEHLLGLRLVFC 2951


>CDM82313.1 unnamed protein product [Triticum aestivum]
          Length = 64

 Score = 70.5 bits (171), Expect = 1e-13
 Identities = 37/64 (57%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
 Frame = -3

Query: 195 MMAHPTRRALMSYGN-SWLKSLWF*GGGRN-NKNQSPGWLVSLVMGDSPAWFGEHFSG*R 22
           M AHPT+  L   G   W +SLWF    R   KNQSPGWLVSLV+GD  AWFGEH  G R
Sbjct: 1   MRAHPTQERLCHMGTLGWKQSLWFLYPVRIIRKNQSPGWLVSLVIGDYLAWFGEHLLGFR 60

Query: 21  LIFC 10
            +FC
Sbjct: 61  FVFC 64


>CDM81530.1 unnamed protein product [Triticum aestivum]
          Length = 64

 Score = 67.0 bits (162), Expect = 2e-12
 Identities = 36/64 (56%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
 Frame = -3

Query: 195 MMAHPTRRALMSYGN-SWLKSLWF*GGGRN-NKNQSPGWLVSLVMGDSPAWFGEHFSG*R 22
           M AHPT+  L   G   W +SLWF    R   KNQSP WLVSLV+GD  AWFGEH  G R
Sbjct: 1   MRAHPTQERLCHMGTLGWKQSLWFLYPVRIIRKNQSPCWLVSLVIGDYLAWFGEHLLGFR 60

Query: 21  LIFC 10
            +FC
Sbjct: 61  FVFC 64


>YP_008992354.1 hypothetical protein Salmi_Mp138 (mitochondrion) [Salvia
           miltiorrhiza] AGU16672.1 hypothetical protein
           Salmi_Mp138 (mitochondrion) [Salvia miltiorrhiza]
          Length = 111

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 35/58 (60%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
 Frame = -3

Query: 249 DQPSAPTTCYDGHSKTWRMMAHPTRRALMSYG-NSWLKSLWF-*GGGRNNKNQ-SPGW 85
           DQPSAPTT YDGHSKTWRMMAH T+  L   G + W + LWF    GRNNK +   GW
Sbjct: 54  DQPSAPTTWYDGHSKTWRMMAHSTQERLCYRGTHGWKQPLWFVLISGRNNKKKVQVGW 111


>AGC78957.1 hypothetical protein (mitochondrion) [Vicia faba]
          Length = 106

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
 Frame = -3

Query: 192 MAHPTRRALMSYG-NSWLKS-LWF*GGGRNNKNQSPGWLVSLVMGDSPAWFGEHFSG 28
           M  PT+  L + G + W +S L     GRNN+N+SPGWLVSLV+GD  AWFGEH  G
Sbjct: 50  MEWPTQERLCNMGTHGWKQSFLMVLISGRNNQNKSPGWLVSLVIGDYLAWFGEHLLG 106


>CDM87129.1 unnamed protein product [Triticum aestivum]
          Length = 52

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 28/47 (59%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
 Frame = -3

Query: 147 WLKSLWF*GGGRN-NKNQSPGWLVSLVMGDSPAWFGEHFSG*RLIFC 10
           W +SLWF    R   KNQSP WLVSLV+G   AWFGEH  G R +FC
Sbjct: 6   WKQSLWFLYPVRIIRKNQSPCWLVSLVIGHYLAWFGEHLLGFRFVFC 52


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