BLASTX nr result
ID: Alisma22_contig00039636
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Alisma22_contig00039636 (264 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t... 82 2e-16 AAK29467.1 polyprotein-like [Solanum chilense] 80 1e-15 OMO94644.1 Integrase, catalytic core [Corchorus capsularis] 79 2e-15 OMO99089.1 Integrase, catalytic core [Corchorus capsularis] 79 4e-15 KYP40203.1 Retrovirus-related Pol polyprotein from transposon TN... 72 7e-15 KYP53808.1 Retrovirus-related Pol polyprotein from transposon TN... 75 5e-14 KYP40209.1 Retrovirus-related Pol polyprotein from transposon TN... 72 5e-14 KMT10093.1 hypothetical protein BVRB_5g118560 [Beta vulgaris sub... 75 7e-14 XP_012089941.1 PREDICTED: uncharacterized protein LOC105648231 [... 75 8e-14 KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN... 75 9e-14 OMO51796.1 Reverse transcriptase, RNA-dependent DNA polymerase [... 75 9e-14 KYP32688.1 Retrovirus-related Pol polyprotein from transposon TN... 72 9e-14 KYP64759.1 Retrovirus-related Pol polyprotein from transposon TN... 74 1e-13 KYP76811.1 Retrovirus-related Pol polyprotein from transposon TN... 74 2e-13 KYP76810.1 Retrovirus-related Pol polyprotein from transposon TN... 74 2e-13 GAU39612.1 hypothetical protein TSUD_276520 [Trifolium subterran... 74 2e-13 KYP55807.1 Retrovirus-related Pol polyprotein from transposon TN... 73 3e-13 KYP47811.1 Retrovirus-related Pol polyprotein from transposon TN... 69 3e-13 KYP49408.1 Retrovirus-related Pol polyprotein from transposon TN... 73 4e-13 KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN... 73 4e-13 >P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Includes: RecName: Full=Protease; Includes: RecName: Full=Reverse transcriptase; Includes: RecName: Full=Endonuclease CAA32025.1 unnamed protein product [Nicotiana tabacum] Length = 1328 Score = 82.4 bits (202), Expect = 2e-16 Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 1/73 (1%) Frame = -2 Query: 218 CLHISD-NTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKICEIGEVCIETE 42 C+H+S +EWV+DT AS+H T R FC Y +G+F KM SY+KI IG++CI+T Sbjct: 284 CMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTN 343 Query: 41 LGYTILLKNVRHI 3 +G T++LK+VRH+ Sbjct: 344 VGCTLVLKDVRHV 356 >AAK29467.1 polyprotein-like [Solanum chilense] Length = 1328 Score = 80.1 bits (196), Expect = 1e-15 Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 1/73 (1%) Frame = -2 Query: 218 CLHISDN-TEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKICEIGEVCIETE 42 C+H++ +EWV+DT ASYH T R FC Y +G++ KM SY+KI IG++C +T Sbjct: 285 CMHLAGTESEWVVDTAASYHATPVRDLFCRYVAGDYGNVKMGNTSYSKIAGIGDICFKTN 344 Query: 41 LGYTILLKNVRHI 3 +G T++LK+VRH+ Sbjct: 345 VGCTLVLKDVRHV 357 >OMO94644.1 Integrase, catalytic core [Corchorus capsularis] Length = 1393 Score = 79.3 bits (194), Expect = 2e-15 Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 2/89 (2%) Frame = -2 Query: 263 TDAEDV-LTCGVAMGHCLHISD-NTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATK 90 +D E V L CG G C H+ D + EW++DTGA+YH R F +YK G+F T+M K Sbjct: 929 SDEETVSLICG--HGDCNHVVDPSIEWIVDTGATYHSVPKRELFTTYKVGDFGETRMGNK 986 Query: 89 SYAKICEIGEVCIETELGYTILLKNVRHI 3 S ++I IG++ ++T G T+ LKNVRHI Sbjct: 987 SVSQIVGIGDIVVQTSTGCTLTLKNVRHI 1015 >OMO99089.1 Integrase, catalytic core [Corchorus capsularis] Length = 572 Score = 78.6 bits (192), Expect = 4e-15 Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 2/89 (2%) Frame = -2 Query: 263 TDAEDV-LTCGVAMGHCLHISD-NTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATK 90 +D E V L CG G C H++D + EW++DTGA+YH R +YK+G+F T+M K Sbjct: 41 SDEEAVSLICG--HGDCNHVADPSIEWIVDTGATYHCVPKRELSTTYKAGDFGETRMGNK 98 Query: 89 SYAKICEIGEVCIETELGYTILLKNVRHI 3 S ++I IG++ ++T G T+ LKNVRHI Sbjct: 99 SVSQIVGIGDIVVQTSTGCTLTLKNVRHI 127 >KYP40203.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 90 Score = 72.4 bits (176), Expect = 7e-15 Identities = 27/68 (39%), Positives = 47/68 (69%) Frame = -2 Query: 209 ISDNTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKICEIGEVCIETELGYT 30 +SD + W++D+GA+ H+T + FF SY SG+F + KM +K+ +G+VC++T +G Sbjct: 12 VSDESMWIVDSGATLHVTPRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQ 71 Query: 29 ILLKNVRH 6 +LL+ V+H Sbjct: 72 LLLRGVKH 79 >KYP53808.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 464 Score = 75.5 bits (184), Expect = 5e-14 Identities = 28/69 (40%), Positives = 49/69 (71%) Frame = -2 Query: 209 ISDNTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKICEIGEVCIETELGYT 30 +SD + W++D+GA+ H+T+ + FF SY SG+F + KM +K+ +G+VC++T +G Sbjct: 189 VSDESMWIVDSGATLHVTSRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQ 248 Query: 29 ILLKNVRHI 3 +LLK V+H+ Sbjct: 249 LLLKGVKHV 257 >KYP40209.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 169 Score = 72.4 bits (176), Expect = 5e-14 Identities = 27/68 (39%), Positives = 47/68 (69%) Frame = -2 Query: 209 ISDNTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKICEIGEVCIETELGYT 30 +SD + W++D+GA+ H+T + FF SY SG+F + KM +K+ +G+VC++T +G Sbjct: 91 VSDESMWIVDSGATLHVTPRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQ 150 Query: 29 ILLKNVRH 6 +LL+ V+H Sbjct: 151 LLLRGVKH 158 >KMT10093.1 hypothetical protein BVRB_5g118560 [Beta vulgaris subsp. vulgaris] Length = 993 Score = 75.1 bits (183), Expect = 7e-14 Identities = 29/65 (44%), Positives = 47/65 (72%) Frame = -2 Query: 197 TEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKICEIGEVCIETELGYTILLK 18 T WV+D+GAS H+T+ + FF SY G++E+ KM A++ +G+VC+ T++G ++LK Sbjct: 772 TSWVIDSGASLHVTSRKEFFTSYTPGDYEVLKMGNDGLAQVVGVGDVCLVTDIGAKLVLK 831 Query: 17 NVRHI 3 NVRH+ Sbjct: 832 NVRHV 836 >XP_012089941.1 PREDICTED: uncharacterized protein LOC105648231 [Jatropha curcas] Length = 405 Score = 74.7 bits (182), Expect = 8e-14 Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Frame = -2 Query: 218 CLHISD-NTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKICEIGEVCIETE 42 C H+ D +TEW++D+GAS H R +F +YK G+F +M S ++ IG++CI+T Sbjct: 191 CCHVGDADTEWIVDSGASDHCVPKREYFSTYKIGDFGTIRMGNNSVSQEVGIGDICIKTS 250 Query: 41 LGYTILLKNVRHI 3 +G T+ LKNVRHI Sbjct: 251 VGSTLTLKNVRHI 263 >KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1321 Score = 74.7 bits (182), Expect = 9e-14 Identities = 33/86 (38%), Positives = 56/86 (65%), Gaps = 1/86 (1%) Frame = -2 Query: 257 AEDVLTCGVAMGHCLHISD-NTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYA 81 ++D +T G C HI++ + EW++D+ ASYH R +F +Y+ G+F M KS + Sbjct: 264 SDDEITLLCNQGECCHIAEPDEEWIIDSAASYHCVPKREYFTTYRKGDFGHVNMGNKSTS 323 Query: 80 KICEIGEVCIETELGYTILLKNVRHI 3 +I IG++ ++T +G T++LK+VRHI Sbjct: 324 QIVGIGDIHLQTGVGCTLILKDVRHI 349 >OMO51796.1 Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus capsularis] Length = 1500 Score = 74.7 bits (182), Expect = 9e-14 Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 1/83 (1%) Frame = -2 Query: 248 VLTCGVAMGHCLHISD-NTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKIC 72 V+ CG G C H++D + EW++D A+YH R F +YK+G+F T+M KS ++I Sbjct: 517 VIVCG--HGDCNHVADPSIEWIVDISAAYHCVPKRELFTTYKAGDFGETRMGNKSVSQIL 574 Query: 71 EIGEVCIETELGYTILLKNVRHI 3 IG++ ++T G T+ LKNVR I Sbjct: 575 GIGDIVVQTSTGCTLTLKNVRQI 597 >KYP32688.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 205 Score = 72.4 bits (176), Expect = 9e-14 Identities = 28/69 (40%), Positives = 45/69 (65%) Frame = -2 Query: 212 HISDNTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKICEIGEVCIETELGY 33 H+SD + W++D+GA H+T + FF SY SG+F M KM K+ + +VC++T +G Sbjct: 80 HVSDESMWIIDSGAMLHVTLRKEFFTSYTSGDFGMLKMGNDVVFKVIGVSDVCLQTNMGM 139 Query: 32 TILLKNVRH 6 +LL+ V+H Sbjct: 140 QLLLRGVKH 148 >KYP64759.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 369 Score = 73.9 bits (180), Expect = 1e-13 Identities = 35/86 (40%), Positives = 59/86 (68%), Gaps = 1/86 (1%) Frame = -2 Query: 257 AEDVLTCGVAMGHCLHIS-DNTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYA 81 AED+L + G+ L+I+ D++ W++D+GAS+H+T H FF SY+SG+F +M + + Sbjct: 247 AEDMLYI-IREGNILNIAYDDSSWIVDSGASFHVTPHGSFFSSYQSGDFGTVQMGNQDRS 305 Query: 80 KICEIGEVCIETELGYTILLKNVRHI 3 KI IG++ + T G ++LK+VRH+ Sbjct: 306 KIVGIGDIILTTSTGCRLVLKDVRHV 331 >KYP76811.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1305 Score = 73.9 bits (180), Expect = 2e-13 Identities = 35/86 (40%), Positives = 59/86 (68%), Gaps = 1/86 (1%) Frame = -2 Query: 257 AEDVLTCGVAMGHCLHIS-DNTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYA 81 AED+L + G+ L+I+ D++ W++D+GAS+H+T H FF SY+SG+F +M + + Sbjct: 257 AEDMLYI-IREGNILNIAYDDSSWIVDSGASFHVTPHGSFFSSYQSGDFGTVQMGNQDRS 315 Query: 80 KICEIGEVCIETELGYTILLKNVRHI 3 KI IG++ + T G ++LK+VRH+ Sbjct: 316 KIVGIGDIILTTSTGCRLVLKDVRHV 341 >KYP76810.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1305 Score = 73.9 bits (180), Expect = 2e-13 Identities = 35/86 (40%), Positives = 59/86 (68%), Gaps = 1/86 (1%) Frame = -2 Query: 257 AEDVLTCGVAMGHCLHIS-DNTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYA 81 AED+L + G+ L+I+ D++ W++D+GAS+H+T H FF SY+SG+F +M + + Sbjct: 257 AEDMLYI-IREGNILNIAYDDSSWIVDSGASFHVTPHGSFFSSYQSGDFGTVQMGNQDRS 315 Query: 80 KICEIGEVCIETELGYTILLKNVRHI 3 KI IG++ + T G ++LK+VRH+ Sbjct: 316 KIVGIGDIILTTSTGCRLVLKDVRHV 341 >GAU39612.1 hypothetical protein TSUD_276520 [Trifolium subterraneum] Length = 1403 Score = 73.6 bits (179), Expect = 2e-13 Identities = 27/68 (39%), Positives = 47/68 (69%) Frame = -2 Query: 209 ISDNTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKICEIGEVCIETELGYT 30 +SD + W++D GA+ H+T + FF SY SG+F + KM AK+ +G++C++T +G Sbjct: 133 VSDESVWIVDNGATLHVTPRKEFFTSYTSGDFGVLKMGNDGVAKVTGVGDICVQTNMGMQ 192 Query: 29 ILLKNVRH 6 +LL++V+H Sbjct: 193 LLLRDVKH 200 >KYP55807.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 476 Score = 73.2 bits (178), Expect = 3e-13 Identities = 28/68 (41%), Positives = 48/68 (70%) Frame = -2 Query: 209 ISDNTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKICEIGEVCIETELGYT 30 +SD + W++D+GA+ H+T + FF SY SG+F + KM+ +K+ IG+VC++T +G Sbjct: 4 VSDESMWIVDSGATLHVTPRKEFFTSYTSGDFGVLKMSNDGVSKVIGIGDVCLQTNMGMQ 63 Query: 29 ILLKNVRH 6 +LL+ V+H Sbjct: 64 LLLRGVKH 71 >KYP47811.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 114 Score = 68.9 bits (167), Expect = 3e-13 Identities = 26/62 (41%), Positives = 42/62 (67%) Frame = -2 Query: 191 WVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKICEIGEVCIETELGYTILLKNV 12 W++D+G + H+T + FF SY SGNF + KM +K+ +G+VC++T +G +LLK V Sbjct: 2 WIVDSGTTLHVTPRKEFFTSYTSGNFGVLKMGNDGVSKVIGVGDVCLQTNMGTQLLLKGV 61 Query: 11 RH 6 +H Sbjct: 62 KH 63 >KYP49408.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 414 Score = 72.8 bits (177), Expect = 4e-13 Identities = 26/69 (37%), Positives = 48/69 (69%) Frame = -2 Query: 209 ISDNTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKICEIGEVCIETELGYT 30 +SD + W++D+GA+ H+T+ + FF SY G+F + KM +K+ +G+VC++T +G Sbjct: 189 VSDESMWIIDSGATLHVTSRKEFFTSYTPGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQ 248 Query: 29 ILLKNVRHI 3 +LL+ V+H+ Sbjct: 249 LLLRGVKHV 257 >KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1314 Score = 72.8 bits (177), Expect = 4e-13 Identities = 31/67 (46%), Positives = 44/67 (65%) Frame = -2 Query: 203 DNTEWVLDTGASYHITTHRHFFCSYKSGNFEMTKMATKSYAKICEIGEVCIETELGYTIL 24 D W++D+GAS+H+T H FF SY+ G+F M KM +KI IGE+ + TE G ++ Sbjct: 285 DECIWIIDSGASFHVTPHEEFFSSYQKGDFGMVKMGNHVTSKIVGIGEIALMTENGNKLM 344 Query: 23 LKNVRHI 3 LK VRH+ Sbjct: 345 LKEVRHV 351