BLASTX nr result

ID: Alisma22_contig00039427 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00039427
         (275 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_009416265.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   1e-06
EOY07672.1 Pentatricopeptide repeat (PPR) superfamily protein, p...    52   7e-06

>XP_009416265.1 PREDICTED: pentatricopeptide repeat-containing protein At2g37310
           [Musa acuminata subsp. malaccensis]
          Length = 685

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 34/91 (37%), Positives = 43/91 (47%)
 Frame = +1

Query: 1   DGIPRKNLFSFNAMLLAYSAHDKXXXXXXXXXXXXXXXKPDAFXXXXXXXXXXXXXXPAL 180
           D IPR+NLFS+NAMLLAY+ H                  PDAF               +L
Sbjct: 96  DDIPRRNLFSWNAMLLAYALHGPASHAIRLFSSFPTSLSPDAF-----TLSALLKSLSSL 150

Query: 181 FVARSRLAREIHGYALAHALIEDIFVGNGLI 273
             + S   R  H +A+ H L+ +IFV NGLI
Sbjct: 151 PPSSSSAYRSAHAFAVRHGLVCNIFVSNGLI 181


>EOY07672.1 Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 667

 Score = 52.4 bits (124), Expect = 7e-06
 Identities = 32/91 (35%), Positives = 40/91 (43%)
 Frame = +1

Query: 1   DGIPRKNLFSFNAMLLAYSAHDKXXXXXXXXXXXXXXXKPDAFXXXXXXXXXXXXXXPAL 180
           D IP KN FSFNA+L+AYS H+                +PD +                 
Sbjct: 97  DKIPNKNTFSFNALLIAYSQHNMFADTLRLFSSVDNVIRPDNYTVTCLLKALSGS----- 151

Query: 181 FVARSRLAREIHGYALAHALIEDIFVGNGLI 273
                RLA+E+H + L     EDIFV NGLI
Sbjct: 152 -FCDKRLAKEVHCFVLRGGFNEDIFVSNGLI 181


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