BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00038789
         (372 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABB46907.1 retrotransposon protein, putative, Ty3-gypsy subclass...    54   5e-06
ABA97045.1 retrotransposon protein, putative, Ty3-gypsy subclass...    54   9e-06

>ABB46907.1 retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 693

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 21/34 (61%), Positives = 32/34 (94%)
 Frame = -2

Query: 104 KEKLISAPMLVLPEPREGYIIFCDASKNELGCVL 3
           K++L++APMLVLP+PR+G+ ++CDAS++ LGCVL
Sbjct: 505 KKRLVTAPMLVLPDPRKGFQVYCDASRHGLGCVL 538


>ABA97045.1 retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1474

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 21/34 (61%), Positives = 31/34 (91%)
 Frame = -2

Query: 104 KEKLISAPMLVLPEPREGYIIFCDASKNELGCVL 3
           K +LISAP+L+LP+P++G+ ++CDASK+ LGCVL
Sbjct: 815 KNRLISAPILILPDPKKGFQVYCDASKHGLGCVL 848