BLASTX nr result
ID: Alisma22_contig00038559
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00038559
(358 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK51235.1 polyprotein [Arabidopsis thaliana] 96 8e-21
XP_017179487.1 PREDICTED: uncharacterized protein LOC108169827 [... 94 7e-20
OMO78631.1 Integrase, catalytic core [Corchorus capsularis] 92 2e-19
OMO61427.1 Zinc finger, CCCH-type [Corchorus capsularis] 92 2e-19
AAD43604.1 T3P18.3 [Arabidopsis thaliana] 91 6e-19
CAC37623.1 copia-like polyprotein [Arabidopsis thaliana] 91 6e-19
AAD21687.1 Strong similarity to gi|3600044 T12H20.12 protease ho... 90 2e-18
XP_013694541.1 PREDICTED: uncharacterized protein LOC106398551 [... 89 2e-18
XP_015386587.1 PREDICTED: uncharacterized protein LOC107177375 [... 89 4e-18
OMO62605.1 Integrase, catalytic core [Corchorus capsularis] 88 7e-18
AAF69172.1 F27F5.11 [Arabidopsis thaliana] 87 1e-17
XP_020114563.1 uncharacterized protein LOC109728471 isoform X15 ... 87 1e-17
KZV57610.1 hypothetical protein F511_03070 [Dorcoceras hygrometr... 87 1e-17
XP_020114543.1 uncharacterized protein LOC109728471 isoform X12 ... 87 1e-17
XP_008671960.1 PREDICTED: uncharacterized protein LOC103649473 [... 87 1e-17
XP_020114487.1 uncharacterized protein LOC109728471 isoform X3 [... 87 1e-17
XP_020114480.1 uncharacterized protein LOC109728471 isoform X2 [... 87 1e-17
XP_020114471.1 uncharacterized protein LOC109728471 isoform X1 [... 87 1e-17
CAN74381.1 hypothetical protein VITISV_007944 [Vitis vinifera] 87 1e-17
JAU84243.1 Retrovirus-related Pol polyprotein from transposon TN... 84 2e-17
>AAK51235.1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 96.3 bits (238), Expect = 8e-21
Identities = 50/119 (42%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
LR FG+ C+PCL+ HK PRSL CVFL Y+ YKGYRCL+ T V+ISR+VIF+E
Sbjct: 682 LRVFGTACYPCLRPLGEHKFEPRSLQCVFLGYNSQYKGYRCLYPPTGRVYISRHVIFDEE 741
Query: 186 VFPFKDSIPSHVAMGELACISDWPEPVHNHDQT--PPLSSSVGEGCLPPSGSLSHTMED 356
FPFK V E + +S W + DQ+ P E P +T++D
Sbjct: 742 TFPFKQKYQFLVPQYESSLLSAWQSSIPQADQSLIPQAEEGKIESLAKPPSIQKNTIQD 800
>XP_017179487.1 PREDICTED: uncharacterized protein LOC108169827 [Malus domestica]
Length = 738
Score = 93.6 bits (231), Expect = 7e-20
Identities = 56/115 (48%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
LRTFG CFP L D +KL PRSL CVFL YSD YKGYRCLH ST V++SR+V FNE
Sbjct: 498 LRTFGCACFPYLGDYATYKLQPRSLSCVFLGYSDQYKGYRCLHPSTGRVYLSRHVKFNEH 557
Query: 186 VFPFKDSIPSHVA-MGELACISDWPEPVHNHDQTPPLSSSVGEGCLPPSGSLSHT 347
FPF S+ S A +L + P P Q PP+ +P + L+HT
Sbjct: 558 DFPFHSSMASPSAPESDLVFVPIHPVPTPLLHQ-PPVP-------MPQNQDLTHT 604
>OMO78631.1 Integrase, catalytic core [Corchorus capsularis]
Length = 577
Score = 92.4 bits (228), Expect = 2e-19
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = +3
Query: 3 CLRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNE 182
CLR FGS CFP L+ +KL PRSLPC+FL YS+ +KGYRCLH + V+ISR+V F+E
Sbjct: 337 CLRVFGSKCFPFLRSHSKNKLEPRSLPCIFLGYSELHKGYRCLHPPSGRVYISRHVTFDE 396
Query: 183 TVFPFKD 203
VFPFKD
Sbjct: 397 KVFPFKD 403
>OMO61427.1 Zinc finger, CCCH-type [Corchorus capsularis]
Length = 1996
Score = 92.4 bits (228), Expect = 2e-19
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = +3
Query: 3 CLRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNE 182
CLR FGS CFP L+ +KL PRSLPC+FL YS+ +KGYRCLH + V+ISR+V F+E
Sbjct: 655 CLRVFGSKCFPFLRSHSKNKLEPRSLPCIFLGYSELHKGYRCLHPPSGRVYISRHVTFDE 714
Query: 183 TVFPFKD 203
VFPFKD
Sbjct: 715 KVFPFKD 721
>AAD43604.1 T3P18.3 [Arabidopsis thaliana]
Length = 1309
Score = 90.9 bits (224), Expect = 6e-19
Identities = 45/95 (47%), Positives = 58/95 (61%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
LR FG+ C+PCL+ +K PRSL CVFL Y + YKGYRCL+ T V+ISR+VIF+E
Sbjct: 524 LRVFGTACYPCLRPLAKNKFDPRSLQCVFLGYHNQYKGYRCLYPPTGKVYISRHVIFDEA 583
Query: 186 VFPFKDSIPSHVAMGELACISDWPEPVHNHDQTPP 290
FPFK+ S V + + W + D TPP
Sbjct: 584 QFPFKEKYHSLVPKYQTTLLQAW----QHTDLTPP 614
>CAC37623.1 copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 90.9 bits (224), Expect = 6e-19
Identities = 45/95 (47%), Positives = 58/95 (61%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
LR FG+ C+PCL+ +K PRSL CVFL Y + YKGYRCL+ T V+ISR+VIF+E
Sbjct: 681 LRVFGTACYPCLRPLAKNKFDPRSLQCVFLGYHNQYKGYRCLYPPTGKVYISRHVIFDEA 740
Query: 186 VFPFKDSIPSHVAMGELACISDWPEPVHNHDQTPP 290
FPFK+ S V + + W + D TPP
Sbjct: 741 QFPFKEKYHSLVPKYQTTLLQAW----QHTDLTPP 771
>AAD21687.1 Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 89.7 bits (221), Expect = 2e-18
Identities = 42/83 (50%), Positives = 51/83 (61%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
LR FGS C+PCL+ +K PRSL CVFL Y+ YKGYRC + T V+ISRNVIFNE+
Sbjct: 679 LRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGKVYISRNVIFNES 738
Query: 186 VFPFKDSIPSHVAMGELACISDW 254
PFK+ S V + W
Sbjct: 739 ELPFKEKYQSLVPQYSTPLLQAW 761
>XP_013694541.1 PREDICTED: uncharacterized protein LOC106398551 [Brassica napus]
Length = 663
Score = 89.4 bits (220), Expect = 2e-18
Identities = 42/85 (49%), Positives = 55/85 (64%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
LR FGS C+P L+ HK PRSL CVFL YS YKGYRCL+ T V+I+++VIF+ET
Sbjct: 386 LRVFGSACYPYLRPVAEHKFEPRSLLCVFLGYSSQYKGYRCLYPPTGKVYITQHVIFDET 445
Query: 186 VFPFKDSIPSHVAMGELACISDWPE 260
+FPFK+ S V + + W +
Sbjct: 446 LFPFKEQYKSLVPQYATSLLRAWQQ 470
>XP_015386587.1 PREDICTED: uncharacterized protein LOC107177375 [Citrus sinensis]
Length = 1013
Score = 88.6 bits (218), Expect = 4e-18
Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
LR FGS CFPCL+ +K P+SLPCVFL YS+ YKGYRC H T V++SR+V+F+E
Sbjct: 464 LRVFGSRCFPCLRRITQNKFDPKSLPCVFLGYSEFYKGYRCFHPPTGKVYLSRDVVFDEK 523
Query: 186 VFPFKDSIPSHVAMGE---LACISDW 254
FPF + + GE L ++W
Sbjct: 524 TFPFMKPGILYSSCGEHTNLTSFNEW 549
>OMO62605.1 Integrase, catalytic core [Corchorus capsularis]
Length = 734
Score = 87.8 bits (216), Expect = 7e-18
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
LR FGSLCFP L+D KL P+SLPCVFL YS YKGYRC +T V+ISR+V+F+E
Sbjct: 593 LRVFGSLCFPYLRDPSKTKLDPKSLPCVFLGYSHQYKGYRCFCPTTNKVYISRHVVFDED 652
Query: 186 VFPFK 200
VFPF+
Sbjct: 653 VFPFQ 657
>AAF69172.1 F27F5.11 [Arabidopsis thaliana]
Length = 1313
Score = 87.4 bits (215), Expect = 1e-17
Identities = 41/67 (61%), Positives = 49/67 (73%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
LR FG C+P L+D ++K PRSL CVFL Y+D YKGYRC ST V+ISR+VIF+ET
Sbjct: 627 LRVFGCACYPTLRDYASNKFDPRSLKCVFLGYNDKYKGYRCFLPSTGRVYISRHVIFDET 686
Query: 186 VFPFKDS 206
VFPF S
Sbjct: 687 VFPFAQS 693
>XP_020114563.1 uncharacterized protein LOC109728471 isoform X15 [Ananas comosus]
Length = 890
Score = 87.0 bits (214), Expect = 1e-17
Identities = 40/64 (62%), Positives = 49/64 (76%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
+R FG LC+P +QD HKLSPRSLPC+FL SD +KG+RCL+ ST V ISR+V F ET
Sbjct: 188 IRVFGCLCYPDVQDIADHKLSPRSLPCIFLGLSDKHKGFRCLYPSTGKVFISRHVTFVET 247
Query: 186 VFPF 197
VFP+
Sbjct: 248 VFPY 251
>KZV57610.1 hypothetical protein F511_03070 [Dorcoceras hygrometricum]
Length = 1011
Score = 87.0 bits (214), Expect = 1e-17
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
LR FGS CFP DT HK P+++PC+F+ YSD +KGY+C +Q + ISR+V+F+E
Sbjct: 637 LRVFGSRCFPYTWDTRKHKFDPKTIPCIFVGYSDRHKGYKCFFPPSQKIIISRHVVFDEK 696
Query: 186 VFPFKDSIPSHVAMGELACISDWPEPVHNHDQTPPLS-----SSVGEGCLPP 326
FPFK+ H A E C+SD V + T P+S S E C PP
Sbjct: 697 QFPFKN---QHCA--EKICLSDHWMSVFDSWTTFPISDNDSLSQSVEACDPP 743
>XP_020114543.1 uncharacterized protein LOC109728471 isoform X12 [Ananas comosus]
Length = 1013
Score = 87.0 bits (214), Expect = 1e-17
Identities = 40/64 (62%), Positives = 49/64 (76%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
+R FG LC+P +QD HKLSPRSLPC+FL SD +KG+RCL+ ST V ISR+V F ET
Sbjct: 311 IRVFGCLCYPDVQDIADHKLSPRSLPCIFLGLSDKHKGFRCLYPSTGKVFISRHVTFVET 370
Query: 186 VFPF 197
VFP+
Sbjct: 371 VFPY 374
>XP_008671960.1 PREDICTED: uncharacterized protein LOC103649473 [Zea mays]
Length = 1477
Score = 87.0 bits (214), Expect = 1e-17
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 6/113 (5%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
LR FG C+P + T AHKL+PRS CVFL YS +KGYRCL ST + ISR+V+F+E+
Sbjct: 863 LRVFGCKCYPNISATAAHKLAPRSTMCVFLGYSSEHKGYRCLDISTNRIIISRHVVFDES 922
Query: 186 VFPFKDSIPSHVAMGELACISDWPEPVHNHDQTPPL----SSSVGE--GCLPP 326
FPF ++ PS L + + E V PP+ SS+ G+ +PP
Sbjct: 923 SFPFAETPPSSALPTNLDFLDLFSEQV----PVPPIGALPSSTAGQRTSAIPP 971
>XP_020114487.1 uncharacterized protein LOC109728471 isoform X3 [Ananas comosus]
Length = 1483
Score = 87.0 bits (214), Expect = 1e-17
Identities = 40/64 (62%), Positives = 49/64 (76%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
+R FG LC+P +QD HKLSPRSLPC+FL SD +KG+RCL+ ST V ISR+V F ET
Sbjct: 781 IRVFGCLCYPDVQDIADHKLSPRSLPCIFLGLSDKHKGFRCLYPSTGKVFISRHVTFVET 840
Query: 186 VFPF 197
VFP+
Sbjct: 841 VFPY 844
>XP_020114480.1 uncharacterized protein LOC109728471 isoform X2 [Ananas comosus]
Length = 1526
Score = 87.0 bits (214), Expect = 1e-17
Identities = 40/64 (62%), Positives = 49/64 (76%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
+R FG LC+P +QD HKLSPRSLPC+FL SD +KG+RCL+ ST V ISR+V F ET
Sbjct: 824 IRVFGCLCYPDVQDIADHKLSPRSLPCIFLGLSDKHKGFRCLYPSTGKVFISRHVTFVET 883
Query: 186 VFPF 197
VFP+
Sbjct: 884 VFPY 887
>XP_020114471.1 uncharacterized protein LOC109728471 isoform X1 [Ananas comosus]
Length = 1551
Score = 87.0 bits (214), Expect = 1e-17
Identities = 40/64 (62%), Positives = 49/64 (76%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
+R FG LC+P +QD HKLSPRSLPC+FL SD +KG+RCL+ ST V ISR+V F ET
Sbjct: 849 IRVFGCLCYPDVQDIADHKLSPRSLPCIFLGLSDKHKGFRCLYPSTGKVFISRHVTFVET 908
Query: 186 VFPF 197
VFP+
Sbjct: 909 VFPY 912
>CAN74381.1 hypothetical protein VITISV_007944 [Vitis vinifera]
Length = 1884
Score = 87.0 bits (214), Expect = 1e-17
Identities = 39/68 (57%), Positives = 51/68 (75%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
LR FG CFP L+D +K SP++ PCVF+ YS +KGYRCLH ST+ V+ISR+VIFNE
Sbjct: 629 LRIFGCQCFPYLRDYGKNKFSPKTYPCVFIGYSSLHKGYRCLHPSTKRVYISRHVIFNEN 688
Query: 186 VFPFKDSI 209
FP+ +S+
Sbjct: 689 CFPYDNSL 696
>JAU84243.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 244
Score = 84.3 bits (207), Expect = 2e-17
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 19/120 (15%)
Frame = +3
Query: 6 LRTFGSLCFPCLQDTVAHKLSPRSLPCVFLVYSDTYKGYRCLHYSTQAVHISRNVIFNET 185
LRTFG C+P L+ A K PRSL CVFL Y+ YKGYRCL+ +T V++SR+V+F+E
Sbjct: 110 LRTFGCACYPTLRAYAATKFDPRSLKCVFLGYTAKYKGYRCLYPATGRVYLSRHVLFDEE 169
Query: 186 VFPFKDSIPSHVAMGELACISDW-------------------PEPVHNHDQTPPLSSSVG 308
VFPF + S S W P P+ + + PPLS++ G
Sbjct: 170 VFPFHNMHTSQHQSQGTNLYSSWLKSFTTDPITPTPPNTAPTPTPLFSAEDFPPLSATPG 229