BLASTX nr result

ID: Alisma22_contig00038217 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00038217
         (351 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010257842.1 PREDICTED: small subunit processome component 20 ...    57   3e-07
OAY28297.1 hypothetical protein MANES_15G056200 [Manihot esculenta]    56   1e-06
OAY28298.1 hypothetical protein MANES_15G056200 [Manihot esculenta]    56   1e-06
CAN75046.1 hypothetical protein VITISV_023142 [Vitis vinifera]         55   2e-06
KMZ64468.1 Small subunit processome component-like protein [Zost...    55   2e-06
CBI17281.3 unnamed protein product, partial [Vitis vinifera]           55   2e-06
XP_010650327.1 PREDICTED: small subunit processome component 20 ...    55   2e-06

>XP_010257842.1 PREDICTED: small subunit processome component 20 homolog [Nelumbo
           nucifera]
          Length = 2710

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
 Frame = +1

Query: 52  DYRPILDIVNMLINKYVRPSTNKVSDDTS-KVVNKILLLMSSLLNVPSIYEDISILNNIA 228
           DY+P+L++V +L+  Y++PS N + +D S  +VNKIL  M  LL+      D S + +I+
Sbjct: 347 DYQPMLNLVGLLMRTYIKPSGNGMVEDHSYDLVNKILQFMLCLLDGLHNSNDASAIASIS 406

Query: 229 DQWAPVFMXXXXXXXXXXXXXXXXXXXXXXAFRGYVMSAL 348
            QWAP+F                        FR +++SAL
Sbjct: 407 SQWAPIFELRNPCLLNFIKELLGKDPSLAYVFRSHILSAL 446


>OAY28297.1 hypothetical protein MANES_15G056200 [Manihot esculenta]
          Length = 2701

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 26/66 (39%), Positives = 44/66 (66%)
 Frame = +1

Query: 52  DYRPILDIVNMLINKYVRPSTNKVSDDTSKVVNKILLLMSSLLNVPSIYEDISILNNIAD 231
           DY+P+++ V  L+ K++ PS+  V +D S++V+KIL LM  +L+      D+S +++   
Sbjct: 324 DYQPMIECVRSLVQKFIVPSSIVVGEDNSEIVDKILQLMLCILDGLKSSNDMSSISSCLL 383

Query: 232 QWAPVF 249
           QWAPVF
Sbjct: 384 QWAPVF 389


>OAY28298.1 hypothetical protein MANES_15G056200 [Manihot esculenta]
          Length = 2707

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 26/66 (39%), Positives = 44/66 (66%)
 Frame = +1

Query: 52  DYRPILDIVNMLINKYVRPSTNKVSDDTSKVVNKILLLMSSLLNVPSIYEDISILNNIAD 231
           DY+P+++ V  L+ K++ PS+  V +D S++V+KIL LM  +L+      D+S +++   
Sbjct: 330 DYQPMIECVRSLVQKFIVPSSIVVGEDNSEIVDKILQLMLCILDGLKSSNDMSSISSCLL 389

Query: 232 QWAPVF 249
           QWAPVF
Sbjct: 390 QWAPVF 395


>CAN75046.1 hypothetical protein VITISV_023142 [Vitis vinifera]
          Length = 2461

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 25/67 (37%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = +1

Query: 52  DYRPILDIVNMLINKYVRPSTNKVSDD-TSKVVNKILLLMSSLLNVPSIYEDISILNNIA 228
           DY+P+L++V +L+  ++ PS   V++D  S++V+K+L LM  +L+   I  D+S +++++
Sbjct: 119 DYQPMLELVRLLVRTFIIPSNIVVAEDHLSEIVDKVLQLMLCILDGLHISNDMSTISSLS 178

Query: 229 DQWAPVF 249
            QWAP F
Sbjct: 179 SQWAPAF 185


>KMZ64468.1 Small subunit processome component-like protein [Zostera marina]
          Length = 2618

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 26/67 (38%), Positives = 45/67 (67%)
 Frame = +1

Query: 52  DYRPILDIVNMLINKYVRPSTNKVSDDTSKVVNKILLLMSSLLNVPSIYEDISILNNIAD 231
           DY+P L+ V  LI +Y+  S++  +++ S +V++ L LM +LL+V  I  + S+++ I  
Sbjct: 339 DYKPFLEGVKTLIERYIPLSSSSETEEQSVIVDRTLKLMLNLLDVRCISSNKSVMSTILV 398

Query: 232 QWAPVFM 252
           QWAP+FM
Sbjct: 399 QWAPIFM 405


>CBI17281.3 unnamed protein product, partial [Vitis vinifera]
          Length = 2629

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 25/67 (37%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = +1

Query: 52  DYRPILDIVNMLINKYVRPSTNKVSDD-TSKVVNKILLLMSSLLNVPSIYEDISILNNIA 228
           DY+P+L++V +L+  ++ PS   V++D  S++V+K+L LM  +L+   I  D+S +++++
Sbjct: 348 DYQPMLELVRLLVRTFIIPSNIVVAEDHLSEIVDKVLQLMLCILDGLHISNDMSTISSLS 407

Query: 229 DQWAPVF 249
            QWAP F
Sbjct: 408 SQWAPAF 414


>XP_010650327.1 PREDICTED: small subunit processome component 20 homolog [Vitis
           vinifera]
          Length = 2710

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 25/67 (37%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = +1

Query: 52  DYRPILDIVNMLINKYVRPSTNKVSDD-TSKVVNKILLLMSSLLNVPSIYEDISILNNIA 228
           DY+P+L++V +L+  ++ PS   V++D  S++V+K+L LM  +L+   I  D+S +++++
Sbjct: 348 DYQPMLELVRLLVRTFIIPSNIVVAEDHLSEIVDKVLQLMLCILDGLHISNDMSTISSLS 407

Query: 229 DQWAPVF 249
            QWAP F
Sbjct: 408 SQWAPAF 414


Top