BLASTX nr result
ID: Alisma22_contig00037963
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00037963
(269 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OMO59932.1 reverse transcriptase [Corchorus capsularis] 57 8e-09
KYP65984.1 Retrovirus-related Pol polyprotein from transposon TN... 58 8e-09
KYP64910.1 Retrovirus-related Pol polyprotein from transposon TN... 58 8e-09
ABF96216.1 retrotransposon protein, putative, Ty1-copia subclass... 60 1e-08
AAP46197.1 putative gag-pol polyprotein [Oryza sativa Japonica G... 60 1e-08
CAN74255.1 hypothetical protein VITISV_039608 [Vitis vinifera] 57 1e-08
KYP65681.1 Retrovirus-related Pol polyprotein from transposon TN... 59 2e-08
CAE05252.2 OSJNBb0115I09.14 [Oryza sativa Japonica Group] 59 3e-08
KYP52827.1 Retrovirus-related Pol polyprotein from transposon TN... 56 3e-08
KYP40054.1 Retrovirus-related Pol polyprotein from transposon TN... 58 6e-08
KYP54444.1 Retrovirus-related Pol polyprotein from transposon TN... 57 6e-08
KYP54288.1 Retrovirus-related Pol polyprotein from transposon TN... 55 7e-08
KZV29905.1 hypothetical protein F511_17329 [Dorcoceras hygrometr... 54 1e-07
KYP73865.1 Retrovirus-related Pol polyprotein from transposon TN... 56 1e-07
CAN62431.1 hypothetical protein VITISV_015835 [Vitis vinifera] 56 2e-07
OMO52435.1 reverse transcriptase [Corchorus capsularis] 53 3e-07
OMO58188.1 Integrase, catalytic core [Corchorus capsularis] 53 3e-07
CAN67821.1 hypothetical protein VITISV_025855, partial [Vitis vi... 56 3e-07
CAN81238.1 hypothetical protein VITISV_031073 [Vitis vinifera] 56 3e-07
CAN71183.1 hypothetical protein VITISV_033416 [Vitis vinifera] 52 3e-07
>OMO59932.1 reverse transcriptase [Corchorus capsularis]
Length = 2144
Score = 56.6 bits (135), Expect(2) = 8e-09
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMI 120
LK +D + +GFV N +D C+Y+ G KFIIL YVDDI LV ND ++
Sbjct: 2056 LKFNDTIKSYGFVENTVDRCIYMKVCGNKFIILVLYVDDILLVTNDAGLL 2105
Score = 30.4 bits (67), Expect(2) = 8e-09
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -3
Query: 120 NNIKIELSRKFEMKHIGEATYVL 52
+++K LS KFEMK +GEA+YV+
Sbjct: 2106 HDVKKFLSNKFEMKDMGEASYVI 2128
>KYP65984.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 789
Score = 58.2 bits (139), Expect(2) = 8e-09
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISKLNLVGN 90
LK +D ++ +GF N +D C+Y+ SG KFI L YVDDI L ND+ ++T +K L N
Sbjct: 685 LKFNDTIMSFGFKENIVDRCIYLKVSGSKFIFLVLYVDDILLATNDLGLLTETKKFLSRN 744
Score = 28.9 bits (63), Expect(2) = 8e-09
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3
Query: 102 LSRKFEMKHIGEATYVL 52
LSR FEMK +GEA+YV+
Sbjct: 741 LSRNFEMKDMGEASYVI 757
>KYP64910.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 371
Score = 58.2 bits (139), Expect(2) = 8e-09
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISKLNLVGN 90
LK +D ++ +GF N +D C+Y+ SG KFI L YVDDI L ND+ ++T +K L N
Sbjct: 52 LKFNDTIMSFGFKENIVDRCIYLKVSGSKFIFLVLYVDDILLATNDLGLLTETKKFLSRN 111
Score = 28.9 bits (63), Expect(2) = 8e-09
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3
Query: 102 LSRKFEMKHIGEATYVL 52
LSR FEMK +GEA+YV+
Sbjct: 108 LSRNFEMKDMGEASYVI 124
>ABF96216.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 904
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISKLNLVGN 90
LK +++ ++GF N++D+C+Y+ T G KFIIL YVDDI L +DINM+ +K L N
Sbjct: 544 LKFDEIIKRFGFKENEVDNCIYIKTKGGKFIILVLYVDDILLASSDINMLHQTKEFLSSN 603
Score = 26.6 bits (57), Expect(2) = 1e-08
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 102 LSRKFEMKHIGEATYVL 52
LS F+MK +GEA+YVL
Sbjct: 600 LSSNFDMKDLGEASYVL 616
>AAP46197.1 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 890
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISKLNLVGN 90
LK +++ ++GF N++D+C+Y+ T G KFIIL YVDDI L +DINM+ +K L N
Sbjct: 530 LKFDEIIKRFGFKENEVDNCIYIKTKGGKFIILVLYVDDILLASSDINMLHQTKEFLSSN 589
Score = 26.6 bits (57), Expect(2) = 1e-08
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 102 LSRKFEMKHIGEATYVL 52
LS F+MK +GEA+YVL
Sbjct: 586 LSSNFDMKDLGEASYVL 602
>CAN74255.1 hypothetical protein VITISV_039608 [Vitis vinifera]
Length = 109
Score = 57.0 bits (136), Expect = 1e-08
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMI 120
LK HDV+ + F+ N +D CVY SG K I+L YVDDIFL ND++++
Sbjct: 52 LKFHDVISSFSFMENVIDQCVYHKVSGSKIILLVLYVDDIFLASNDLSLL 101
>KYP65681.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 394
Score = 58.5 bits (140), Expect(2) = 2e-08
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISKLNLVGN 90
+K D ++ +GF N +D C+Y+ SG KFI L YVDDIFL ND+ +++ +K L N
Sbjct: 246 IKFSDTIMSFGFKENTVDRCIYLKVSGSKFIFLILYVDDIFLATNDLGLLSETKNFLSNN 305
Score = 26.9 bits (58), Expect(2) = 2e-08
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 102 LSRKFEMKHIGEATYVL 52
LS FEMK +GEA+YV+
Sbjct: 302 LSNNFEMKDMGEASYVI 318
>CAE05252.2 OSJNBb0115I09.14 [Oryza sativa Japonica Group]
Length = 853
Score = 59.3 bits (142), Expect = 3e-08
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISKLNLVGN 90
LK +++ ++GF N++D+C+Y+ T G KFIIL YVDDI L +DINM+ +K L N
Sbjct: 764 LKFDEIIKRFGFKENEVDNCIYINTKGGKFIILVLYVDDILLASSDINMLHQTKEFLSSN 823
>KYP52827.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 113
Score = 56.2 bits (134), Expect = 3e-08
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISK 108
+K +D ++ +GF N +D C+Y+ SG KFI L YVDDI L ND+ +++ +K
Sbjct: 1 IKFNDTIMSFGFKENTVDRCIYLKVSGSKFIFLILYVDDILLATNDLRLLSETK 54
>KYP40054.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 680
Score = 58.2 bits (139), Expect = 6e-08
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISKLNLVGN 90
LK +D ++ +GF N +D C+Y+ SG KFI L YVDDI L ND+ ++T +K L N
Sbjct: 546 LKFNDTIMSFGFKENIVDRCIYLKVSGSKFIFLVLYVDDILLATNDLGLLTETKKFLSRN 605
>KYP54444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 196
Score = 57.0 bits (136), Expect = 6e-08
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISKLNLVGN 90
+K +D ++ +GF N +D C+Y+ SG KFI L YVDDI L ND+ +++ +K L N
Sbjct: 65 IKFNDTIMSFGFKENTIDWCIYLKVSGSKFIFLILYVDDILLATNDLGLLSETKKFLSNN 124
>KYP54288.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 105
Score = 55.1 bits (131), Expect = 7e-08
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISK 108
LK +D +V +GF N +D C+Y+ SG K IIL YVDDI L ND+ ++ +K
Sbjct: 35 LKFNDTIVSFGFKENIVDRCIYLKVSGSKVIILILYVDDILLATNDLGLLHETK 88
>KZV29905.1 hypothetical protein F511_17329 [Dorcoceras hygrometricum]
Length = 427
Score = 53.5 bits (127), Expect(2) = 1e-07
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = -1
Query: 266 KLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISK 108
K H++++ +GF N +D+CVY SG K I L YVDDI L NDI ++ +K
Sbjct: 66 KFHEIILSFGFEENLIDNCVYHKFSGSKHIFLVLYVDDILLATNDIGLLHQTK 118
Score = 29.6 bits (65), Expect(2) = 1e-07
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 8/38 (21%)
Frame = -3
Query: 102 LSRKFEMKHIGEATYVLKFR--------FLGIKSLEYL 13
LSR FEMK +GEA++VL + LG+ + Y+
Sbjct: 121 LSRNFEMKDLGEASFVLGIQIHRDRSRCILGLSQMSYI 158
>KYP73865.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 195
Score = 56.2 bits (134), Expect = 1e-07
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISKLNLVGN 90
+K +D ++ +GF N +D C+Y+ SG KFI L YVDDI L ND+ +++ +K L N
Sbjct: 52 IKFNDTIMSFGFKENTVDLCIYLKVSGRKFIFLILYVDDILLATNDLGLLSETKNFLSNN 111
>CAN62431.1 hypothetical protein VITISV_015835 [Vitis vinifera]
Length = 1217
Score = 55.8 bits (133), Expect(2) = 2e-07
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = -1
Query: 266 KLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISK 108
K H ++V +GF +N +D CVY SG K+I L YVDDI L NDI+++ +K
Sbjct: 897 KFHQIIVSYGFEANLMDECVYHKFSGSKYIFLVLYVDDILLATNDISILHDTK 949
Score = 26.2 bits (56), Expect(2) = 2e-07
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -3
Query: 102 LSRKFEMKHIGEATYVL 52
LS+ FEMK IG+A+++L
Sbjct: 952 LSKHFEMKDIGDASFIL 968
>OMO52435.1 reverse transcriptase [Corchorus capsularis]
Length = 1925
Score = 52.8 bits (125), Expect(2) = 3e-07
Identities = 28/60 (46%), Positives = 35/60 (58%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISKLNLVGN 90
L+ H ++Q GF + D CVYV S F+ILS YVDDI L ND+ MI +K L N
Sbjct: 1552 LRFHQAIIQNGFEMIEEDHCVYVKRSKGSFVILSLYVDDILLAGNDMEMIVTTKKWLSSN 1611
Score = 28.9 bits (63), Expect(2) = 3e-07
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -3
Query: 102 LSRKFEMKHIGEATYVLKFRFLGIKSLEYL 13
LS FEMK +GEA YVL + L +S L
Sbjct: 1608 LSSNFEMKDMGEANYVLGVKILRDRSKRLL 1637
>OMO58188.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1486
Score = 52.8 bits (125), Expect(2) = 3e-07
Identities = 28/60 (46%), Positives = 35/60 (58%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISKLNLVGN 90
L+ H ++Q GF + D CVYV S F+ILS YVDDI L ND+ MI +K L N
Sbjct: 919 LRFHQAIIQNGFEMIEEDHCVYVKRSKGSFVILSLYVDDILLAGNDMEMIVTTKKWLSSN 978
Score = 28.9 bits (63), Expect(2) = 3e-07
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -3
Query: 102 LSRKFEMKHIGEATYVLKFRFLGIKSLEYL 13
LS FEMK +GEA YVL + L +S L
Sbjct: 975 LSSNFEMKDMGEANYVLGVKILRDRSKRLL 1004
>CAN67821.1 hypothetical protein VITISV_025855, partial [Vitis vinifera]
Length = 1356
Score = 55.8 bits (133), Expect(2) = 3e-07
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = -1
Query: 266 KLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISK 108
K H ++V +GF +N +D CVY SG K+I L YVDDI L NDI+++ +K
Sbjct: 993 KFHQIIVSYGFEANLMDECVYHKFSGSKYIFLVLYVDDILLATNDISILHDTK 1045
Score = 25.8 bits (55), Expect(2) = 3e-07
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -3
Query: 102 LSRKFEMKHIGEATYVL 52
LS+ FEMK +G+A++VL
Sbjct: 1048 LSKHFEMKDLGDASFVL 1064
>CAN81238.1 hypothetical protein VITISV_031073 [Vitis vinifera]
Length = 1354
Score = 55.8 bits (133), Expect(2) = 3e-07
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = -1
Query: 266 KLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMITISK 108
K H ++V +GF +N +D CVY SG K+I L YVDDI L NDI+++ +K
Sbjct: 991 KFHQIIVSYGFEANLMDECVYHKFSGSKYIFLVLYVDDILLATNDISILHDTK 1043
Score = 25.8 bits (55), Expect(2) = 3e-07
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -3
Query: 102 LSRKFEMKHIGEATYVL 52
LS+ FEMK +G+A++VL
Sbjct: 1046 LSKHFEMKDLGDASFVL 1062
>CAN71183.1 hypothetical protein VITISV_033416 [Vitis vinifera]
Length = 1255
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = -1
Query: 269 LKLHDVMVQWGFVSNKLDSCVYVLTSGIKFIILSFYVDDIFLVVNDINMI 120
LK H+++ +GFV N +D C+Y+ SG K L YVDDI L ND ++
Sbjct: 1059 LKFHNIISSFGFVENVMDQCIYLKVSGSKVCFLVLYVDDILLATNDKGLL 1108
Score = 29.3 bits (64), Expect(2) = 3e-07
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = -3
Query: 120 NNIKIELSRKFEMKHIGEATYVL-----KFRFLGIKSL 22
+ +K LS+ F+MK +GEA+YV+ + RF GI L
Sbjct: 1109 HEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGL 1146