BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00036337
         (400 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP38864.1 Retrovirus-related Pol polyprotein from transposon TN...    67   2e-10
ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop...    60   9e-08
KYP35899.1 Retrovirus-related Pol polyprotein from transposon TN...    56   1e-07
JAU80029.1 Retrovirus-related Pol polyprotein from transposon TN...    57   5e-07
KYP38715.1 Retrovirus-related Pol polyprotein from transposon TN...    54   2e-06
KYP31293.1 Retrovirus-related Pol polyprotein from transposon TN...    54   6e-06
AAD23690.1 putative retroelement pol polyprotein [Arabidopsis th...    54   9e-06

>KYP38864.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 507

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
 Frame = +3

Query: 3   VDDGKLES*EVKGKFMGYSVGVEGYRIRSSLEHRVILSINVTFNENSMLYP-FDITESAD 179
           V++GKLE    KG FMGY  GV+GYRI S  E +VILS +V F+E+ + YP  + T S  
Sbjct: 281 VNEGKLEPRSKKGLFMGYGDGVKGYRIWSPAERKVILSRDVIFDESHLFYPSLEFTVSGK 340

Query: 180 SEDISARIKLDATPVRITGDTSPRLVRMEKRLNQYLRHSRKLRDLIA*LL-------IGD 338
           ++ I  +++   T   I  +        E +  Q+              L          
Sbjct: 341 NQKILKQVEDGKTSGSILDEEKSEDFNEESQQQQFRVDDSDPSSPQGSSLQTQYDTEAYQ 400

Query: 339 RPKRVIAPPVRYDYEEVVAH 398
           +PKR+  PPVRY +E+++A+
Sbjct: 401 KPKRISNPPVRYGFEDMMAY 420


>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
            [Solanum lycopersicum]
          Length = 1307

 Score = 59.7 bits (143), Expect = 9e-08
 Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3    VDDGKLES*EVKGKFMGYSVGVEGYRIRSSLEHRVILSINVTFNENSMLYPFDITESADS 182
            V +GKLE    KG F+GY  GV+G+RI S  E RVI+S NV F+E+ +L    +  +  S
Sbjct: 648  VSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTI-VKPTTTS 706

Query: 183  EDISARIKLDATPVRITGD-TSPRLVRMEKRLNQYLRHSRKLRDLIA*LLIGDRPKRV-I 356
            E  S   +++   ++   D   P     E +    +  S  +   I   +  DRP+RV +
Sbjct: 707  ETGSLDKQVEFQVIQNESDLKEPEEEDQEPQTETDIPES--MPSDIHQSIAQDRPRRVGV 764

Query: 357  APPVRYDYEEVVAH 398
             PP RY +E++V +
Sbjct: 765  RPPTRYGFEDMVGY 778


>KYP35899.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 123

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = +3

Query: 3   VDDGKLES*EVKGKFMGYSVGVEGYRIRSSLEHRVILSINVTFNENSMLYP-FDITESAD 179
           V+ GKLE    KG+FMGY  GV+GYRI S  E +VILS +V F+E+ M +P  + T S  
Sbjct: 47  VNKGKLEPRSKKGQFMGYGDGVKGYRIWSPSERKVILSKDVIFDESHMFHPSLEFTVSGK 106

Query: 180 SEDISARIK 206
           ++ +  +++
Sbjct: 107 NQKVLKQVE 115


>JAU80029.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Noccaea caerulescens]
          Length = 752

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 20/144 (13%)
 Frame = +3

Query: 6   DDGKLES*EVKGKFMGYSVGVEGYRIRSSLEHRVILSINVTFNENSMLYPFDITESADSE 185
           DDGKL+    KG F GY  GV+G+R+    + + I+S N+ F E+ M      T+S +S 
Sbjct: 68  DDGKLKPRAKKGIFTGYPEGVKGFRVWLLEDRKCIISRNIVFREDMMYKDIIKTDSGNSN 127

Query: 186 DISARIKLDATPVRITGDTSPRLVRMEKRLNQYLRHSRKLR------------------- 308
           ++        +   + GD   R   ++   +Q    SR ++                   
Sbjct: 128 NLDLFYTNQLSSYDLVGDNRERATSVQGGASQ--NDSRDMQDQNENVGTVEAPEQPVEDS 185

Query: 309 -DLIA*LLIGDRPKRVIAPPVRYD 377
            DL    L+ DRP+RV+ PPV+ D
Sbjct: 186 EDLQDYQLVRDRPRRVVKPPVKLD 209


>KYP38715.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 190

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 27/51 (52%), Positives = 36/51 (70%)
 Frame = +3

Query: 3   VDDGKLES*EVKGKFMGYSVGVEGYRIRSSLEHRVILSINVTFNENSMLYP 155
           V++GKLE    KG FMGY  GV+GYRI S  E ++ILS +V F+E+ M +P
Sbjct: 72  VNEGKLEPRSRKGLFMGYGDGVKGYRIWSPSEKKIILSRDVVFDESHMFHP 122


>KYP31293.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 569

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 28/51 (54%), Positives = 35/51 (68%)
 Frame = +3

Query: 3   VDDGKLES*EVKGKFMGYSVGVEGYRIRSSLEHRVILSINVTFNENSMLYP 155
           V++GKLE    KG FMGY  GV+GYRI S  E +VILS +V F+E  + YP
Sbjct: 509 VNEGKLEPRSKKGLFMGYGDGVKGYRIWSLAERKVILSRDVIFDEFHLFYP 559


>AAD23690.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 17/147 (11%)
 Frame = +3

Query: 6    DDGKLES*EVKGKFMGYSVGVEGYRIRSSLEHRVILSINVTFNENSMLYPFDITESADSE 185
            DDGKL     KG  +GY +GV+GY+I    E + ++S NV F EN+       ++ A+ +
Sbjct: 655  DDGKLNPRAKKGILVGYPIGVKGYKIWLLEEKKCVVSRNVIFQENASYKDMMQSKDAEKD 714

Query: 186  DISA------RIKLDATPVRITGDTSPRLVRMEKRLN-------QYLRHSRKLRDLI--- 317
            +  A       + LD   V  +G   P +V  +   N        Y        D+I   
Sbjct: 715  ENEAPPSSYLDLDLDHEEVITSGGDDP-IVEAQSPFNPSPATTQTYSEGVNSETDIIQSP 773

Query: 318  -A*LLIGDRPKRVIAPPVRYDYEEVVA 395
             +  L+ DR +R I  PVR+D E+ +A
Sbjct: 774  LSYQLVRDRDRRTIRAPVRFDDEDYLA 800