BLASTX nr result
ID: Alisma22_contig00035731
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00035731
(464 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAT53147.1 Retrovirus-related Pol polyprotein from transposon TN... 59 2e-07
CAD39988.3 OSJNBb0045P24.6 [Oryza sativa Japonica Group] 59 4e-07
WP_071212117.1 hypothetical protein [Acinetobacter baumannii] OI... 56 7e-07
AAL31082.1 putative polyprotein [Oryza sativa Japonica Group] 58 7e-07
KYP61570.1 Retrovirus-related Pol polyprotein from transposon TN... 57 2e-06
KYP49849.1 Retrovirus-related Pol polyprotein from transposon TN... 56 2e-06
ABA93525.1 retrotransposon protein, putative, Ty1-copia subclass... 56 3e-06
AAL75486.1 putative Fourf gag/pol protein [Zea mays] 56 3e-06
AAP03376.1 putative gag-pol polyprotein [Oryza sativa Japonica G... 56 3e-06
ABA96226.1 retrotransposon protein, putative, Ty1-copia subclass... 56 3e-06
ABF95769.1 retrotransposon protein, putative, Ty1-copia subclass... 56 3e-06
CAD39659.2 OSJNBa0074B10.16 [Oryza sativa Japonica Group] 56 3e-06
KYP48234.1 Retrovirus-related Pol polyprotein from transposon TN... 56 4e-06
KYP54398.1 Retrovirus-related Pol polyprotein from transposon TN... 56 4e-06
AAG03096.2 putative polyprotein [Oryza sativa Japonica Group] AA... 56 4e-06
ABA99473.2 retrotransposon protein, putative, Ty1-copia subclass... 56 4e-06
KYP72325.1 Retrovirus-related Pol polyprotein from transposon TN... 55 4e-06
KYP31709.1 Retrovirus-related Pol polyprotein from transposon TN... 55 5e-06
KYP33726.1 Retrovirus-related Pol polyprotein from transposon TN... 55 5e-06
CAE03994.1 OSJNBb0089B03.8 [Oryza sativa Japonica Group] 55 5e-06
>JAT53147.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 524
Score = 59.3 bits (142), Expect = 2e-07
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQLYVG-GG 77
GGEYTS+ EFC+ +G++H++T Y P+ GV + KN TL + S L S+ L G
Sbjct: 69 GGEYTSNAVHEFCEQNGIIHELTAPYSPESNGVAERKNRTLLDMVNSMLCSSGLPENLWG 128
Query: 76 EALSKTHHILNTVPINIHKV 17
EAL H+LN VP K+
Sbjct: 129 EALLAACHVLNCVPPRSQKI 148
>CAD39988.3 OSJNBb0045P24.6 [Oryza sativa Japonica Group]
Length = 982
Score = 58.5 bits (140), Expect = 4e-07
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQL-YVGGG 77
GGE+ S+ F FC+ HG++H+ T Y P+ G+ + KN TL+ + + L++T L G
Sbjct: 366 GGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLETTGLPKAWWG 425
Query: 76 EALSKTHHILNTVPINIHK 20
EAL ++H+LN VP NI+K
Sbjct: 426 EALLTSNHVLNRVP-NINK 443
>WP_071212117.1 hypothetical protein [Acinetobacter baumannii] OIF96049.1
hypothetical protein A7M93_19480 [Acinetobacter
baumannii]
Length = 177
Score = 56.2 bits (134), Expect = 7e-07
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQL-YVGGG 77
GGEY S++F EFC HG++H+ T + PQ G+ + KN TL+ + + L + L G
Sbjct: 94 GGEYFSNVFDEFCVEHGIIHERTPPFSPQSNGIAERKNRTLTYLVNAMLSTAGLSKAWWG 153
Query: 76 EALSKTHHILNTVP 35
EA+ H+LN VP
Sbjct: 154 EAILMACHVLNRVP 167
>AAL31082.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 836
Score = 57.8 bits (138), Expect = 7e-07
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQL-YVGGG 77
GGE+ S+ F FC+ HG++H+ T+LY P+ G+ + KN TL+ + + L + L G
Sbjct: 301 GGEFFSNEFDLFCEEHGIIHERTSLYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWG 360
Query: 76 EALSKTHHILNTVP 35
EAL ++H+LN VP
Sbjct: 361 EALLTSNHVLNRVP 374
>KYP61570.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 846
Score = 56.6 bits (135), Expect = 2e-06
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQL--YVGG 80
GGEYTS F FC+ G+ H VT Y PQ G ++ KN T+ + S LK+ QL Y+
Sbjct: 546 GGEYTSREFERFCEKEGIEHQVTPPYTPQHNGTVERKNRTIMNMVRSMLKAKQLPKYL-W 604
Query: 79 GEALSKTHHILNTVP 35
GEA+S +ILN P
Sbjct: 605 GEAVSTAAYILNRCP 619
>KYP49849.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 262
Score = 55.8 bits (133), Expect = 2e-06
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FL--TSNLKSTQLYVGG 80
GGEY+S+ EF + HG++H+VT Y PQ G+ + KN TL + T+ L S
Sbjct: 113 GGEYSSNEMGEFFETHGIIHEVTPPYAPQSNGIAERKNCTLLDMINVTTRLSSGLPDNLW 172
Query: 79 GEALSKTHHILNTVPINI 26
GEAL HILN +P I
Sbjct: 173 GEALFTARHILNRIPYKI 190
>ABA93525.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1235
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQL-YVGGG 77
GGE+ S+ F FC+ HG++H+ T Y P+ G+ + KN TL+ + + L +T L G
Sbjct: 494 GGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTTGLPKAWWG 553
Query: 76 EALSKTHHILNTVP 35
EAL ++H+LN VP
Sbjct: 554 EALLTSNHVLNRVP 567
>AAL75486.1 putative Fourf gag/pol protein [Zea mays]
Length = 1292
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQL-YVGGG 77
GGEY S++F EFC HG++H+ T + PQ G+ + KN TL+ + + L + L G
Sbjct: 575 GGEYFSNVFDEFCVEHGIIHERTPPFSPQSNGIAERKNRTLTDLVNAMLSTAGLSKAWWG 634
Query: 76 EALSKTHHILNTVP 35
EA+ H+LN VP
Sbjct: 635 EAILTACHVLNRVP 648
>AAP03376.1 putative gag-pol polyprotein [Oryza sativa Japonica Group]
AAT85296.1 integrase core domain containing protein
[Oryza sativa Japonica Group] ABF98120.1 retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 783
Score = 55.8 bits (133), Expect = 3e-06
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQL-YVGGG 77
GGEY S+ F FC+ +G++H+ T Y PQ GV + KN TL+ + + L S L G
Sbjct: 110 GGEYFSNEFTSFCEEYGIIHERTHPYSPQSNGVAERKNRTLTEMVNAMLDSAGLSKEWWG 169
Query: 76 EALSKTHHILNTVPINIHKV 17
EA+ H+LN +P KV
Sbjct: 170 EAILTACHVLNIIPTKHKKV 189
>ABA96226.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 975
Score = 55.8 bits (133), Expect = 3e-06
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQL-YVGGG 77
GGEY S+ F FC+ G++H++T Y PQ GV + KN TL+ + + L + L G
Sbjct: 393 GGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWG 452
Query: 76 EALSKTHHILNTVPINIHKVV 14
EA+ H+LN +P+ HK V
Sbjct: 453 EAVLTASHVLNKIPMK-HKEV 472
>ABF95769.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 991
Score = 55.8 bits (133), Expect = 3e-06
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQL-YVGGG 77
GGEY S+ F+ FC+ +G++H+ T Y PQ GV + KN TL+ + + L + L G
Sbjct: 342 GGEYFSNEFISFCEEYGIIHERTAPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWG 401
Query: 76 EALSKTHHILNTVPINIHKVV 14
EA+ H+LN +P HK V
Sbjct: 402 EAILTACHVLNRIPTK-HKEV 421
>CAD39659.2 OSJNBa0074B10.16 [Oryza sativa Japonica Group]
Length = 1006
Score = 55.8 bits (133), Expect = 3e-06
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = -2
Query: 292 ERAINKSPIIRVMGGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTS 113
ER I + +R GGEY S+ F FC+ G++H+ T Y PQ GV + KN TL+ + +
Sbjct: 494 ERKIKRLRSVR--GGEYFSNKFTSFCEEFGIIHERTPPYSPQSNGVAERKNRTLTEMVNA 551
Query: 112 NLKSTQL-YVGGGEALSKTHHILNTVPINIHKVV 14
L + L GEA+ H+LN +P+ HK V
Sbjct: 552 MLDTAGLSKEWWGEAIFTACHVLNKIPMK-HKEV 584
>KYP48234.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1029
Score = 55.8 bits (133), Expect = 4e-06
Identities = 35/75 (46%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQL--YVGG 80
GGEY S F FC+ G+VH+VT Y PQ G + KN TL + S LKS L Y+
Sbjct: 542 GGEYVSAEFTSFCEDEGIVHEVTPPYTPQHNGTAERKNRTLMNMVRSMLKSKGLPKYL-W 600
Query: 79 GEALSKTHHILNTVP 35
GEA+S +ILN P
Sbjct: 601 GEAVSTAAYILNRSP 615
>KYP54398.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1087
Score = 55.8 bits (133), Expect = 4e-06
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQL--YVGG 80
GGEYTS F FC+ G+ H VT Y PQ G + KN T+ + S LK+ QL Y+
Sbjct: 338 GGEYTSREFERFCEKEGIEHQVTPPYTPQHTGTAERKNRTIMNMVRSMLKAKQLPKYL-W 396
Query: 79 GEALSKTHHILNTVP 35
GEA S +ILN P
Sbjct: 397 GEAASTAAYILNRCP 411
>AAG03096.2 putative polyprotein [Oryza sativa Japonica Group] AAW56890.1
putative polyprotein [Oryza sativa Japonica Group]
Length = 1274
Score = 55.8 bits (133), Expect = 4e-06
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQL-YVGGG 77
GGE+ S+ F FC+ HG++H++T Y P+ G+ + KN TL+ + + L + L G
Sbjct: 561 GGEFFSNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWG 620
Query: 76 EALSKTHHILNTVP 35
EAL ++H+LN VP
Sbjct: 621 EALLTSNHVLNRVP 634
>ABA99473.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 55.8 bits (133), Expect = 4e-06
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQL-YVGGG 77
GGE+ S+ F FC+ HG++H++T Y P+ G+ + KN TL+ + + L + L G
Sbjct: 522 GGEFFSNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWG 581
Query: 76 EALSKTHHILNTVP 35
EAL ++H+LN VP
Sbjct: 582 EALLTSNHVLNRVP 595
>KYP72325.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 565
Score = 55.5 bits (132), Expect = 4e-06
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQLYVG-GG 77
GGEY+S+ EF + HG++H+VT Y PQ G+ + KN TL + + L S+ L G
Sbjct: 152 GGEYSSNEMGEFFETHGIIHEVTPPYAPQSNGIAERKNRTLLDMINAMLISSGLPDNLWG 211
Query: 76 EALSKTHHILNTVP 35
EAL HILN +P
Sbjct: 212 EALFTACHILNRIP 225
>KYP31709.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 714
Score = 55.5 bits (132), Expect = 5e-06
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQLYVG-GG 77
GGEY+S+ EF + HG++H+VT Y PQ G+ + KN TL + + L S+ L G
Sbjct: 480 GGEYSSNEMGEFFETHGIIHEVTPPYAPQSNGIAERKNRTLLDMINAMLISSGLPDNLWG 539
Query: 76 EALSKTHHILNTVP 35
EAL HILN +P
Sbjct: 540 EALFTACHILNRIP 553
>KYP33726.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 880
Score = 55.5 bits (132), Expect = 5e-06
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = -2
Query: 253 GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSNLKSTQLYVG-GG 77
GGEY+S+ EF + HG++H+VT Y PQ G+ + KN TL + + L S+ L G
Sbjct: 482 GGEYSSNEMGEFFETHGIIHEVTPPYAPQSNGIAERKNRTLLDMINAMLISSGLPDNLWG 541
Query: 76 EALSKTHHILNTVP 35
EAL HILN +P
Sbjct: 542 EALFTACHILNRIP 555
>CAE03994.1 OSJNBb0089B03.8 [Oryza sativa Japonica Group]
Length = 1113
Score = 55.5 bits (132), Expect = 5e-06
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = -2
Query: 280 NKSPIIRVM---GGEYTSHLFLEFCQFHGVVHDVTTLYLPQPCGVLQYKN*TLS*FLTSN 110
NK+ I R+ GGE+ S+ F FC+ HG++H+ T Y P+ G+ + KN TL+ + +
Sbjct: 342 NKTSIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAM 401
Query: 109 LKSTQL-YVGGGEALSKTHHILNTVP 35
L + L GEAL ++H+LN VP
Sbjct: 402 LDTAGLPKAWWGEALLTSNHVLNRVP 427