BLASTX nr result

ID: Alisma22_contig00035708 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00035708
         (341 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMZ71945.1 Pentatricopeptide repeat-containing protein [Zostera ...    82   8e-16
JAT57775.1 Pentatricopeptide repeat-containing protein At4g01400...    60   2e-08

>KMZ71945.1 Pentatricopeptide repeat-containing protein [Zostera marina]
          Length = 459

 Score = 81.6 bits (200), Expect = 8e-16
 Identities = 38/51 (74%), Positives = 44/51 (86%)
 Frame = +3

Query: 189 SPARLRKLVATHPDPLVAKEILDLAASMDPAFLSTRESYPAVHALLLRLTR 341
           SPARLRKL+ATHPDPLVAKEIL LAAS+DP FL++  SYP +H L+LRL R
Sbjct: 37  SPARLRKLIATHPDPLVAKEILSLAASLDPTFLTSPTSYPPIHTLILRLAR 87


>JAT57775.1 Pentatricopeptide repeat-containing protein At4g01400,
           mitochondrial [Anthurium amnicola]
          Length = 455

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
 Frame = +3

Query: 186 CSPARLRKLVATHPDPLVAKEILDLAASMDPAFL--STRESYPAVHALLLRLTR 341
           CSPARLRKL+A   DP +AK+I DLAAS+ P     S+  SYP++H L+L+L R
Sbjct: 39  CSPARLRKLIAAQRDPFLAKDIFDLAASLRPDVFSPSSPRSYPSLHVLVLKLAR 92


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