BLASTX nr result

ID: Alisma22_contig00034787 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00034787
         (422 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010695579.1 PREDICTED: uncharacterized protein LOC104908189 [...    55   4e-06
JAT66623.1 50S ribosomal protein L11, partial [Anthurium amnicola]     55   4e-06

>XP_010695579.1 PREDICTED: uncharacterized protein LOC104908189 [Beta vulgaris
           subsp. vulgaris]
          Length = 448

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
 Frame = -2

Query: 421 KWTPQ*DVR*AALKTTPIWVTFPDLGSH-WTRRALTIIGYTLGVPKVVDFWVNGKYA-GA 248
           KWT   D     LK  PIW+  P+L  + W+  +L+ IG  LGVP   D           
Sbjct: 27  KWTATFDFHNEILKVVPIWIRLPNLPLNCWSENSLSRIGSLLGVPVYADECTTKTLRISF 86

Query: 247 PHLCIEVAVER*LSXXXXXXXXXXXXXEIKVIYDALPEHCPDCKVFGH 104
             + +E+ V + +              + KV+YD LPE C  C+V GH
Sbjct: 87  ARILVEIDVTKEILYEIAIEDPTGAVFKQKVVYDWLPEFCKKCQVIGH 134


>JAT66623.1 50S ribosomal protein L11, partial [Anthurium amnicola]
          Length = 530

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = -2

Query: 388 ALKTTPIWVTFPDLGSH-WTRRALTIIGYTLGVPKVVDFWVNGKYA-GAPHLCIEVAVER 215
           +L+  PIWV FP+L  H W+    + IG  +GVP  +D   + +     P +CI+V  ++
Sbjct: 161 SLQEIPIWVEFPNLPFHMWSSALFSKIGSLIGVPLYMDGSTSRRSRISNPRICIKVKADQ 220

Query: 214 *LSXXXXXXXXXXXXXEIKVIYDALPEHCPDCKVFGHMSGSC 89
            L                KV Y   P+ C  CK FGH + SC
Sbjct: 221 ELPGEVLYQGPGDEVMTFKVNYPWKPQTCTLCKSFGHANASC 262


Top