BLASTX nr result
ID: Alisma22_contig00034467
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00034467
(359 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010938078.1 PREDICTED: mediator of RNA polymerase II transcri... 67 2e-10
XP_010921239.1 PREDICTED: mediator of RNA polymerase II transcri... 66 3e-10
XP_010921237.1 PREDICTED: mediator of RNA polymerase II transcri... 66 3e-10
XP_009384953.1 PREDICTED: mediator of RNA polymerase II transcri... 64 1e-09
XP_008782719.1 PREDICTED: mediator of RNA polymerase II transcri... 64 3e-09
XP_002516789.1 PREDICTED: mediator of RNA polymerase II transcri... 59 1e-07
XP_018675347.1 PREDICTED: mediator of RNA polymerase II transcri... 57 4e-07
XP_009420227.2 PREDICTED: mediator of RNA polymerase II transcri... 57 4e-07
CAQ58623.1 unknown gene [Vitis vinifera] 57 5e-07
XP_011466386.1 PREDICTED: mediator of RNA polymerase II transcri... 57 7e-07
XP_009777924.1 PREDICTED: mediator of RNA polymerase II transcri... 56 1e-06
XP_019077175.1 PREDICTED: mediator of RNA polymerase II transcri... 55 2e-06
CAN60712.1 hypothetical protein VITISV_036441 [Vitis vinifera] 55 2e-06
XP_010653099.1 PREDICTED: mediator of RNA polymerase II transcri... 55 2e-06
XP_006842623.1 PREDICTED: mediator of RNA polymerase II transcri... 55 2e-06
XP_010653098.1 PREDICTED: mediator of RNA polymerase II transcri... 55 2e-06
XP_002264843.2 PREDICTED: mediator of RNA polymerase II transcri... 55 2e-06
CBI31143.3 unnamed protein product, partial [Vitis vinifera] 55 2e-06
XP_019253470.1 PREDICTED: mediator of RNA polymerase II transcri... 55 2e-06
XP_016511487.1 PREDICTED: mediator of RNA polymerase II transcri... 55 2e-06
>XP_010938078.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Elaeis guineensis]
Length = 1330
Score = 66.6 bits (161), Expect = 2e-10
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEE-EVPSSSERGSQCTEDSSENHMNRNIYS 181
E L+GPIP++D RLC LL+I+PL++ L+KEE E+PS +G S N N ++
Sbjct: 390 EPLEGPIPQLDARLCMLLSIVPLSIVPLVKEEYEMPSLISKG---ITRSYGNGAEENNFA 446
Query: 182 SRRHGLVXXXXXXXXXXXXXTPPPSXXXXXXXXXXXXXTFLIDHKRRHGNI 334
R+HGLV PPPS TFL + K GN+
Sbjct: 447 FRKHGLVSALQVLGQFSGLLLPPPSVVNAANSAASKAATFLSNLKTVGGNL 497
>XP_010921239.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Elaeis guineensis]
Length = 1331
Score = 66.2 bits (160), Expect = 3e-10
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEE-EVPSSSERG--SQCTEDSSENHMNRNI 175
E +GP+P +D RLC LL+I+PLA+ L+KEE E+PS G C +++ N+
Sbjct: 392 EPQEGPLPHLDARLCMLLSIVPLAIVSLVKEEYEMPSLMNNGMTRSCMKETEGNN----- 446
Query: 176 YSSRRHGLVXXXXXXXXXXXXXTPPPSXXXXXXXXXXXXXTFLIDHKRRHGNI 334
++SR+HGL+ +PPPS TF+ + K GN+
Sbjct: 447 FASRKHGLISSLQVLGQFSGLLSPPPSVVNAANSAASKAATFISNLKTGSGNL 499
>XP_010921237.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Elaeis guineensis]
Length = 1352
Score = 66.2 bits (160), Expect = 3e-10
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEE-EVPSSSERG--SQCTEDSSENHMNRNI 175
E +GP+P +D RLC LL+I+PLA+ L+KEE E+PS G C +++ N+
Sbjct: 392 EPQEGPLPHLDARLCMLLSIVPLAIVSLVKEEYEMPSLMNNGMTRSCMKETEGNN----- 446
Query: 176 YSSRRHGLVXXXXXXXXXXXXXTPPPSXXXXXXXXXXXXXTFLIDHKRRHGNI 334
++SR+HGL+ +PPPS TF+ + K GN+
Sbjct: 447 FASRKHGLISSLQVLGQFSGLLSPPPSVVNAANSAASKAATFISNLKTGSGNL 499
>XP_009384953.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Musa acuminata subsp. malaccensis]
Length = 1330
Score = 64.3 bits (155), Expect = 1e-09
Identities = 37/111 (33%), Positives = 54/111 (48%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEEEVPSSSERGSQCTEDSSENHMNRNIYSS 184
E L+GPIP +D RLC LL+I+PLA+ ++KEE +S EN N+ +SS
Sbjct: 390 EPLEGPIPHLDARLCMLLSIVPLAIVAVVKEELDIRYPVNNGFLRSNSHENEGNK--FSS 447
Query: 185 RRHGLVXXXXXXXXXXXXXTPPPSXXXXXXXXXXXXXTFLIDHKRRHGNID 337
RRHGL+ PPPS F+ ++K + N++
Sbjct: 448 RRHGLISSLKMLGQFSALLLPPPSVVNAANNAATKAAVFVSNYKAGNNNLN 498
>XP_008782719.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Phoenix dactylifera]
Length = 1331
Score = 63.5 bits (153), Expect = 3e-09
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEE-EVPSSSERG--SQCTEDSSENHMNRNI 175
E L+GPIP +D RLC LL+I+PLA+ L+K+E E+PS G C + + ++
Sbjct: 392 EPLEGPIPHLDARLCMLLSIVPLAIVPLVKDEYEMPSLINNGITRSCVKGTEGSN----- 446
Query: 176 YSSRRHGLVXXXXXXXXXXXXXTPPPSXXXXXXXXXXXXXTFLIDHKRRHGNI 334
++S++HGL+ +PPPS TF+ + K GN+
Sbjct: 447 FASKKHGLIFSLQVLGQFSGLLSPPPSVVNAANSAASKAATFISNLKTGSGNL 499
>XP_002516789.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
[Ricinus communis] EEF45403.1 conserved hypothetical
protein [Ricinus communis]
Length = 1325
Score = 58.9 bits (141), Expect = 1e-07
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEEEVPSSSERGSQCTEDSSENHMNRNIY-S 181
+ ++GPIP++D RLC LL+IIPL V DLI+EEE + E +E S NH N +
Sbjct: 385 DPIEGPIPRLDARLCILLSIIPLVVSDLIEEEENAPTEE-----SESGSTNHWKENKFQG 439
Query: 182 SRRHGLVXXXXXXXXXXXXXTPPPS 256
RR+ LV +PP S
Sbjct: 440 KRRNDLVFSLQLLGDHQGLLSPPQS 464
>XP_018675347.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Musa acuminata subsp. malaccensis]
Length = 1067
Score = 57.4 bits (137), Expect = 4e-07
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEE-EVPSSSERGSQCTEDSSENHMNRNIYS 181
E ++GPIP +D RLC LL+I+PLAV ++KEE E P G +S N N+ ++
Sbjct: 428 EPIEGPIPHLDARLCMLLSIVPLAVAAVVKEENETPYPFSNGF-LRSNSFGNEGNK--FA 484
Query: 182 SRRHGLVXXXXXXXXXXXXXTPPPSXXXXXXXXXXXXXTFLIDHKRRHGNID 337
RRH L+ +PPPS F+ + K + N++
Sbjct: 485 VRRHALISSLKILGQFSALLSPPPSVVNVANSAATKAAVFVYNFKAGNSNLN 536
>XP_009420227.2 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1362
Score = 57.4 bits (137), Expect = 4e-07
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEE-EVPSSSERGSQCTEDSSENHMNRNIYS 181
E ++GPIP +D RLC LL+I+PLAV ++KEE E P G +S N N+ ++
Sbjct: 428 EPIEGPIPHLDARLCMLLSIVPLAVAAVVKEENETPYPFSNGF-LRSNSFGNEGNK--FA 484
Query: 182 SRRHGLVXXXXXXXXXXXXXTPPPSXXXXXXXXXXXXXTFLIDHKRRHGNID 337
RRH L+ +PPPS F+ + K + N++
Sbjct: 485 VRRHALISSLKILGQFSALLSPPPSVVNVANSAATKAAVFVYNFKAGNSNLN 536
>CAQ58623.1 unknown gene [Vitis vinifera]
Length = 1472
Score = 57.0 bits (136), Expect = 5e-07
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEE--EVPSSSERGSQ--CTEDSSENHMNRN 172
+ L+GPIP ++ RLC LL+I+PLA+ L+++E SSS+ G + TE + M+R
Sbjct: 478 DPLEGPIPHLESRLCMLLSIVPLAITQLLEDEVNSCNSSSQGGREYGYTEIGYGHEMDRK 537
Query: 173 IYSSRRHGLVXXXXXXXXXXXXXTPPPS 256
++SR+HGL+ PP S
Sbjct: 538 CHASRKHGLISSLQVLGHFSALLCPPSS 565
>XP_011466386.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Fragaria vesca subsp. vesca]
Length = 1323
Score = 56.6 bits (135), Expect = 7e-07
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEEEVPSSS---ERGSQCTEDSSENHMNRNI 175
+ L+GPIP ++ RLC LL+I+PLA+ +++++E +SS + S+ E+ + MN
Sbjct: 384 DPLEGPIPHLESRLCVLLSIVPLAIANVLEDEANLNSSSLKDTASRNVENGDGHEMNSKA 443
Query: 176 YSSRRHGLVXXXXXXXXXXXXXTPPPS 256
+SR+HGL+ PP S
Sbjct: 444 STSRKHGLISSLKILGNFSGLLCPPSS 470
>XP_009777924.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X1 [Nicotiana sylvestris] XP_009777925.1
PREDICTED: mediator of RNA polymerase II transcription
subunit 33A isoform X2 [Nicotiana sylvestris]
Length = 1319
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/82 (35%), Positives = 42/82 (51%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEEEVPSSSERGSQCTEDSSENHMNRNIYSS 184
+ ++GP+P++D RLC L +II L V DLI+EEE + E E S + HM + +
Sbjct: 380 DPIEGPMPRLDTRLCMLFSIITLVVADLIEEEESEACDE-----IESSIDRHMKNQVAGT 434
Query: 185 RRHGLVXXXXXXXXXXXXXTPP 250
RR +V TPP
Sbjct: 435 RRRDIVSCLQSLGDYQSLLTPP 456
>XP_019077175.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X4 [Vitis vinifera]
Length = 976
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEE--EVPSSSERGSQ--CTEDSSENHMNRN 172
+ L+GPIP ++ RLC LL+I PLA+ L+++E SSS+ G + TE + M+R
Sbjct: 387 DPLEGPIPHLESRLCMLLSIAPLAITQLLEDEVNSCNSSSQGGREYGYTEIGYGHEMDRK 446
Query: 173 IYSSRRHGLVXXXXXXXXXXXXXTPPPS 256
++SR+HGL+ PP S
Sbjct: 447 CHASRKHGLISSLQVLGHFSALLCPPSS 474
>CAN60712.1 hypothetical protein VITISV_036441 [Vitis vinifera]
Length = 1237
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEE--EVPSSSERGSQ--CTEDSSENHMNRN 172
+ L+GPIP ++ RLC LL+I PLA+ L+++E SSS+ G + TE + M+R
Sbjct: 340 DPLEGPIPHLESRLCMLLSIAPLAITQLLEDEVNSCNSSSQGGREYGYTEIGYGHEMDRK 399
Query: 173 IYSSRRHGLVXXXXXXXXXXXXXTPPPS 256
++SR+HGL+ PP S
Sbjct: 400 CHASRKHGLISSLQVLGHFSALLCPPSS 427
>XP_010653099.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X3 [Vitis vinifera]
Length = 1310
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEE--EVPSSSERGSQ--CTEDSSENHMNRN 172
+ L+GPIP ++ RLC LL+I PLA+ L+++E SSS+ G + TE + M+R
Sbjct: 387 DPLEGPIPHLESRLCMLLSIAPLAITQLLEDEVNSCNSSSQGGREYGYTEIGYGHEMDRK 446
Query: 173 IYSSRRHGLVXXXXXXXXXXXXXTPPPS 256
++SR+HGL+ PP S
Sbjct: 447 CHASRKHGLISSLQVLGHFSALLCPPSS 474
>XP_006842623.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
[Amborella trichopoda] ERN04298.1 hypothetical protein
AMTR_s00077p00181380 [Amborella trichopoda]
Length = 1314
Score = 55.5 bits (132), Expect = 2e-06
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEEEVPSSSERG--SQCTEDSSENHMNRNIY 178
+ L+GP+P +D RLC LL+I PLA +I+E+ SS G +Q + + E+ + N+
Sbjct: 381 DPLEGPVPHLDARLCVLLSITPLAAARVIEEDMEDSSLINGGVTQNSGTTDEHGKDGNLP 440
Query: 179 SSRRHGLVXXXXXXXXXXXXXTPPPS 256
+SRR GL+ PPPS
Sbjct: 441 TSRRQGLISSLQVLGQFSGLLLPPPS 466
>XP_010653098.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X2 [Vitis vinifera]
Length = 1330
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEE--EVPSSSERGSQ--CTEDSSENHMNRN 172
+ L+GPIP ++ RLC LL+I PLA+ L+++E SSS+ G + TE + M+R
Sbjct: 385 DPLEGPIPHLESRLCMLLSIAPLAITQLLEDEVNSCNSSSQGGREYGYTEIGYGHEMDRK 444
Query: 173 IYSSRRHGLVXXXXXXXXXXXXXTPPPS 256
++SR+HGL+ PP S
Sbjct: 445 CHASRKHGLISSLQVLGHFSALLCPPSS 472
>XP_002264843.2 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X1 [Vitis vinifera]
Length = 1332
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEE--EVPSSSERGSQ--CTEDSSENHMNRN 172
+ L+GPIP ++ RLC LL+I PLA+ L+++E SSS+ G + TE + M+R
Sbjct: 387 DPLEGPIPHLESRLCMLLSIAPLAITQLLEDEVNSCNSSSQGGREYGYTEIGYGHEMDRK 446
Query: 173 IYSSRRHGLVXXXXXXXXXXXXXTPPPS 256
++SR+HGL+ PP S
Sbjct: 447 CHASRKHGLISSLQVLGHFSALLCPPSS 474
>CBI31143.3 unnamed protein product, partial [Vitis vinifera]
Length = 1342
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEE--EVPSSSERGSQ--CTEDSSENHMNRN 172
+ L+GPIP ++ RLC LL+I PLA+ L+++E SSS+ G + TE + M+R
Sbjct: 396 DPLEGPIPHLESRLCMLLSIAPLAITQLLEDEVNSCNSSSQGGREYGYTEIGYGHEMDRK 455
Query: 173 IYSSRRHGLVXXXXXXXXXXXXXTPPPS 256
++SR+HGL+ PP S
Sbjct: 456 CHASRKHGLISSLQVLGHFSALLCPPSS 483
>XP_019253470.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
[Nicotiana attenuata] OIS98727.1 mediator of rna
polymerase ii transcription subunit 33a [Nicotiana
attenuata]
Length = 1319
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/82 (35%), Positives = 42/82 (51%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEEEVPSSSERGSQCTEDSSENHMNRNIYSS 184
+ ++GP+P++D RLC L +II L V DLI+EEE + E E S HM + + +
Sbjct: 380 DPIEGPMPRLDTRLCMLFSIITLVVADLIEEEESEACDE-----IESSIGRHMKKQVAGT 434
Query: 185 RRHGLVXXXXXXXXXXXXXTPP 250
RR +V TPP
Sbjct: 435 RRRDIVSCLQSLGDYQSLLTPP 456
>XP_016511487.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
[Nicotiana tabacum]
Length = 1319
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/82 (35%), Positives = 42/82 (51%)
Frame = +2
Query: 5 EDLDGPIPKIDVRLCTLLAIIPLAVCDLIKEEEVPSSSERGSQCTEDSSENHMNRNIYSS 184
+ ++GP+P++D RLC L +II L V DLI+EEE + E E S HM + + +
Sbjct: 380 DPIEGPMPRLDTRLCMLFSIITLVVADLIEEEESEACDE-----IESSIGRHMKKQVAGT 434
Query: 185 RRHGLVXXXXXXXXXXXXXTPP 250
RR +V TPP
Sbjct: 435 RRRDIVSCLQSLGDYQSLLTPP 456