BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00034385
         (1426 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OAY76980.1 DNA-directed RNA polymerase 2B, chloroplastic/mitocho...   464   e-152
XP_008783046.1 PREDICTED: DNA-directed RNA polymerase 1B, mitoch...   456   e-147
JAT46286.1 DNA-directed RNA polymerase 2B, chloroplastic/mitocho...   451   e-145
XP_010929072.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...   446   e-143
XP_008788965.1 PREDICTED: DNA-directed RNA polymerase 1B, mitoch...   445   e-143
XP_010261422.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...   441   e-143
XP_010261414.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...   441   e-142
XP_020109467.1 DNA-directed RNA polymerase 1B, mitochondrial-lik...   437   e-142
XP_010257888.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...   440   e-141
XP_010943346.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...   437   e-140
XP_010943345.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...   437   e-140
XP_015880486.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...   437   e-140
XP_010660553.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...   430   e-137
XP_002267464.1 PREDICTED: DNA-directed RNA polymerase 1, mitocho...   428   e-137
ONK55019.1 uncharacterized protein A4U43_UnF8500 [Asparagus offi...   426   e-136
KQL23893.1 hypothetical protein SETIT_0288241mg, partial [Setari...   415   e-135
XP_006844103.1 PREDICTED: DNA-directed RNA polymerase 1B, mitoch...   420   e-134
XP_018816700.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...   417   e-134
XP_018816699.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...   417   e-133
XP_017637865.1 PREDICTED: DNA-directed RNA polymerase 1B, mitoch...   418   e-133

>OAY76980.1 DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial [Ananas
            comosus]
          Length = 909

 Score =  464 bits (1194), Expect = e-152
 Identities = 253/466 (54%), Positives = 320/466 (68%), Gaps = 5/466 (1%)
 Frame = +3

Query: 42   SSPVGFRYDLVQRG--FTGPANAYRAFASVAEEVSSTDVEDDVSAVDEIHSLLKQLSK-- 209
            SS +G+   +V R    + P+ + R  AS+AE VSSTDV++D SAV+EI ++L+Q+S+  
Sbjct: 70   SSRIGWPPTIVGRSSALSIPSTSSRRVASLAEAVSSTDVDEDASAVEEIQTMLEQISRSG 129

Query: 210  EETGANCRTSRASE-GNPAPKHTMLPKEWLGSNPESENGHTNGSSLPRTXXXXXXXXXXX 386
            E T    RT   +  G  A   T +    + + P+  +G                     
Sbjct: 130  EPTDGGRRTREITNLGAAASARTAVS---VPARPKQVHG--------------------- 165

Query: 387  XXXXXXHMSASRYKNLKRRQIKIETEAWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMG 566
                   M + +Y  L+RRQIKIETEAWEQAAKEYKELL DMC+ KLAPNLPYVKSLF+G
Sbjct: 166  -------MGSGKYAMLRRRQIKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYVKSLFLG 218

Query: 567  WFEPLKSLIEEEQKLCREGRNKTAYAPYFIQLHPDMMAVITMHKIMALLMTGDGTASIRV 746
            WFEPL+  I  EQ  CR+G+N+ ++APYF QL  DMMAVITMHK+M+LLMTG G  S+RV
Sbjct: 219  WFEPLRDQIALEQDHCRDGKNRASHAPYFNQLPADMMAVITMHKLMSLLMTGSGDGSVRV 278

Query: 747  VQAAISVGDAIEQEARIQRFLDKTRNKGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSD 926
            VQAA  VG+AIEQEARI +FL+KTR +  K +          +   D SVT+EQ+     
Sbjct: 279  VQAACQVGEAIEQEARIHKFLEKTRKRAYKDKTN--------EDIEDDSVTKEQE----- 325

Query: 927  VATSPVKDQLYLRKKVTSLMKKQKLYQVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDS 1106
                      +LRK+VT+LMK+QK++QVR+IVK+  ++KPW Q+  AKVGSRLIE L+++
Sbjct: 326  ----------FLRKRVTNLMKQQKVHQVRRIVKEQGDSKPWGQDAQAKVGSRLIELLMET 375

Query: 1107 AYIQPPVTQSVDGPPDIRPAFRRVVKNLISEKRGGPRIQRQYGVIECDPLVQQGLDRTAR 1286
            AYIQPPVTQ+ DGPPDIRPAFR  ++ +  E++   +  R+YGVIECDPLV+QGLDRTAR
Sbjct: 376  AYIQPPVTQAADGPPDIRPAFRHSLRTVTKEQQ---KTSRRYGVIECDPLVRQGLDRTAR 432

Query: 1287 HMVIPYMPMLVPPVNWTGYDKGAHFFLPSYVMRTHGARQQREAVKR 1424
            HMVIPYMPMLVPPVNW GYDKGAH FLPSY+MR HGARQQREAVKR
Sbjct: 433  HMVIPYMPMLVPPVNWMGYDKGAHLFLPSYIMRIHGARQQREAVKR 478


>XP_008783046.1 PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Phoenix dactylifera]
          Length = 1038

 Score =  456 bits (1174), Expect = e-147
 Identities = 245/439 (55%), Positives = 300/439 (68%)
 Frame = +3

Query: 108  RAFASVAEEVSSTDVEDDVSAVDEIHSLLKQLSKEETGANCRTSRASEGNPAPKHTMLPK 287
            R FASVAE VSSTDV++D S+++EI  +L+++SK +     R      GN      + PK
Sbjct: 130  RFFASVAEAVSSTDVDEDTSSIEEIQGMLEEMSKIDV----REGSKIGGN---LEEVRPK 182

Query: 288  EWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMSASRYKNLKRRQIKIETEA 467
            + LG               PR                   M + +Y  L+RRQI+IETEA
Sbjct: 183  QQLGQ--------------PRMVCG---------------MGSGKYAILRRRQIRIETEA 213

Query: 468  WEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLIEEEQKLCREGRNKTAYAP 647
            WEQAAKEYKELL DMC+ KLAPNLPYVKSLF+GWFEPL+  I  EQ+ CR+ R + ++ P
Sbjct: 214  WEQAAKEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDQIAAEQEQCRDPRTRVSHGP 273

Query: 648  YFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGDAIEQEARIQRFLDKTRNK 827
            YF QL  DMMAVITMHK+M+LLMTG+G   IRVVQAA  +G+AIE E RI RFL+KTR K
Sbjct: 274  YFYQLPADMMAVITMHKLMSLLMTGNGDGGIRVVQAACQIGEAIEHEVRIHRFLEKTRKK 333

Query: 828  GAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQLYLRKKVTSLMKKQKLYQ 1007
              K +K                     +D      T   K+Q +LRKKVT+LMKKQK++Q
Sbjct: 334  TDKDKK--------------------NEDVEGATLT---KEQEFLRKKVTNLMKKQKVHQ 370

Query: 1008 VRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQSVDGPPDIRPAFRRVVKN 1187
            VRKIVK  D++KPW Q+  AKVGSRLIE L+++AYIQPPV+QS DGPPDIRPAFR  ++ 
Sbjct: 371  VRKIVKGQDDSKPWGQDAQAKVGSRLIELLMETAYIQPPVSQSADGPPDIRPAFRHSLRT 430

Query: 1188 LISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPMLVPPVNWTGYDKGAHFFL 1367
            +  E++   +  R+YGVIECDPLV+QGLDRTARHMVIPYMPMLVPPVNWTGY+KG H FL
Sbjct: 431  VTKEQQ---KHSRRYGVIECDPLVRQGLDRTARHMVIPYMPMLVPPVNWTGYEKGGHLFL 487

Query: 1368 PSYVMRTHGARQQREAVKR 1424
            PSY+MRTHGARQQREAV+R
Sbjct: 488  PSYIMRTHGARQQREAVRR 506


>JAT46286.1 DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial
            [Anthurium amnicola]
          Length = 1072

 Score =  451 bits (1159), Expect = e-145
 Identities = 248/464 (53%), Positives = 298/464 (64%), Gaps = 5/464 (1%)
 Frame = +3

Query: 48   PVGFRYDLVQRGFTGPANAYRAFASVAEEVSSTDVEDDVSAVDEIHSLLKQLSKEETGAN 227
            P G   DLV R        YR F SVAE VS TDVED+ + ++ +  LL++LSKEE+G  
Sbjct: 141  PAGKGSDLVCR--------YRGFGSVAEAVSPTDVEDEAACLEGLQELLQELSKEESGDV 192

Query: 228  CRTSRASEGN-----PAPKHTMLPKEWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXX 392
             R   + E       P P H     + L    ++                          
Sbjct: 193  KRDGSSVEVQQVLRPPQPLHEQQKLQRLQQQKQTPG------------------------ 228

Query: 393  XXXXHMSASRYKNLKRRQIKIETEAWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWF 572
                 M    Y  L+RRQIKIETEAWEQAAKEYKELL DMC+ KLAPNLPY+KSLF+GWF
Sbjct: 229  -----MVQKNYSVLRRRQIKIETEAWEQAAKEYKELLVDMCEQKLAPNLPYMKSLFLGWF 283

Query: 573  EPLKSLIEEEQKLCREGRNKTAYAPYFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQ 752
            EPL+  I +EQ   REG+NK  YAPYF QL  +MM+VITMHK+M LLMTG    S RV+ 
Sbjct: 284  EPLRDRILKEQHSYREGKNKAGYAPYFDQLPAEMMSVITMHKLMGLLMTGGCDGSARVIH 343

Query: 753  AAISVGDAIEQEARIQRFLDKTRNKGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVA 932
            AA  VG+A+EQE RIQRF +KT+ K  K ++   +         D ++T+EQQ       
Sbjct: 344  AACQVGEAVEQEVRIQRFFEKTKKKTGKHKENECE---------DDALTKEQQ------- 387

Query: 933  TSPVKDQLYLRKKVTSLMKKQKLYQVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAY 1112
                     LR KVT LMKKQKL+QV+KI+K  D+ KPW QE HAKVGSRLIE L+++AY
Sbjct: 388  --------MLRTKVTQLMKKQKLHQVQKILKPQDDFKPWGQEFHAKVGSRLIELLIETAY 439

Query: 1113 IQPPVTQSVDGPPDIRPAFRRVVKNLISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHM 1292
            IQPPV Q  D PPDIRPAFR  ++ +  E++   +  R+YGVIECDPLV+QGLDRTARHM
Sbjct: 440  IQPPVDQQADWPPDIRPAFRHTLRTIAKEQQ---KSSRRYGVIECDPLVKQGLDRTARHM 496

Query: 1293 VIPYMPMLVPPVNWTGYDKGAHFFLPSYVMRTHGARQQREAVKR 1424
            VIPYMPMLV PVNWTGYDKGAH FLPSY+MRTHG+RQQREAVKR
Sbjct: 497  VIPYMPMLVTPVNWTGYDKGAHLFLPSYIMRTHGSRQQREAVKR 540


>XP_010929072.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Elaeis guineensis]
          Length = 1038

 Score =  446 bits (1146), Expect = e-143
 Identities = 241/439 (54%), Positives = 294/439 (66%)
 Frame = +3

Query: 108  RAFASVAEEVSSTDVEDDVSAVDEIHSLLKQLSKEETGANCRTSRASEGNPAPKHTMLPK 287
            R FASVAE V+STDV++D S+++EI  +L+++SK     + R      GN       +P 
Sbjct: 130  RFFASVAEAVASTDVDEDASSIEEIQGMLEEMSK----IDAREGSKIGGNLEEVRPKVPL 185

Query: 288  EWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMSASRYKNLKRRQIKIETEA 467
            E     P    G                            M + +Y  L+RRQI+IETEA
Sbjct: 186  E----KPRMVPG----------------------------MGSGKYAILRRRQIRIETEA 213

Query: 468  WEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLIEEEQKLCREGRNKTAYAP 647
            WEQAAKEYKELL DMC+ KLAPNLPYVKSLF+GWFEPL+  I  EQ+ C +  N+ +Y  
Sbjct: 214  WEQAAKEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDQIAAEQEKCGDPGNRLSYGR 273

Query: 648  YFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGDAIEQEARIQRFLDKTRNK 827
            YF QL  DMMAVITMHK+M+LLMTG G   IRVVQAA  +G+AIE E RI RFL+KTR K
Sbjct: 274  YFNQLPADMMAVITMHKLMSLLMTGSGYGGIRVVQAACQIGEAIEHEVRIHRFLEKTRKK 333

Query: 828  GAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQLYLRKKVTSLMKKQKLYQ 1007
              K +K                    +   G+ +A    K+Q +LRKKVT+LMKKQKL Q
Sbjct: 334  ADKDKK-------------------NEDVEGATLA----KEQEFLRKKVTNLMKKQKLRQ 370

Query: 1008 VRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQSVDGPPDIRPAFRRVVKN 1187
            VRKIV+  D++KPW Q+  AKVGSRLIE L+++AYIQPPV+QS DGPPDIRPAFR  ++ 
Sbjct: 371  VRKIVRGQDDSKPWGQDFQAKVGSRLIELLMETAYIQPPVSQSADGPPDIRPAFRHSLRT 430

Query: 1188 LISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPMLVPPVNWTGYDKGAHFFL 1367
            +  E++   +  R+YGVIECDPLV+QGLDRTARHMVIPYMPMLVPPV+WTGYDKG H FL
Sbjct: 431  VTKEQQ---KHSRRYGVIECDPLVRQGLDRTARHMVIPYMPMLVPPVHWTGYDKGGHLFL 487

Query: 1368 PSYVMRTHGARQQREAVKR 1424
            PSY+MR HGARQQREAVKR
Sbjct: 488  PSYIMRIHGARQQREAVKR 506


>XP_008788965.1 PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Phoenix
            dactylifera]
          Length = 1036

 Score =  445 bits (1144), Expect = e-143
 Identities = 237/439 (53%), Positives = 294/439 (66%)
 Frame = +3

Query: 108  RAFASVAEEVSSTDVEDDVSAVDEIHSLLKQLSKEETGANCRTSRASEGNPAPKHTMLPK 287
            + +A+VAE V STD++++ S+++EI SLL+++S+ E   + + S  S+  P       PK
Sbjct: 128  KGYANVAEAVVSTDLDEEASSIEEIQSLLEEMSRVEVAEDWKVSDRSQEFPQKAQLEEPK 187

Query: 288  EWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMSASRYKNLKRRQIKIETEA 467
            +  G                                    M A +Y  L++RQIKIETEA
Sbjct: 188  KVSG------------------------------------MGAKKYAKLRQRQIKIETEA 211

Query: 468  WEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLIEEEQKLCREGRNKTAYAP 647
            WEQAAKEYKELL DMC+ KLAPNLPYVKSLF+GWFEP +  I  EQ+ CR+ RN+ AY P
Sbjct: 212  WEQAAKEYKELLQDMCEQKLAPNLPYVKSLFLGWFEPFRDKIAAEQEKCRDVRNRAAYGP 271

Query: 648  YFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGDAIEQEARIQRFLDKTRNK 827
            Y  QL  DMMAVITMHK+M+LLMTG    S+ VVQAA  VG AIEQE +I RFL+K++ K
Sbjct: 272  YIGQLPADMMAVITMHKLMSLLMTGGSNGSVLVVQAACQVGSAIEQEVKIHRFLEKSKQK 331

Query: 828  GAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQLYLRKKVTSLMKKQKLYQ 1007
                +K G              V E    T         K+Q  LRKKVT+LMKKQKL Q
Sbjct: 332  TNINKKSG--------------VAEVDNIT---------KEQELLRKKVTNLMKKQKLQQ 368

Query: 1008 VRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQSVDGPPDIRPAFRRVVKN 1187
            VRKIVK  D++KPW Q+  AKVGSRLIE L+++AYIQPPV Q  D PPDIRPAFR +++N
Sbjct: 369  VRKIVKGQDDSKPWGQDSRAKVGSRLIELLVETAYIQPPVNQLADSPPDIRPAFRHLLRN 428

Query: 1188 LISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPMLVPPVNWTGYDKGAHFFL 1367
            + +E++   +I R+YG IECDPLV+QGLDRTARHMVIPYMPMLVPP++W GYDKGAH FL
Sbjct: 429  VQNEQK---KISRRYGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWKGYDKGAHLFL 485

Query: 1368 PSYVMRTHGARQQREAVKR 1424
            PSY+MRTHG+RQQREAVKR
Sbjct: 486  PSYLMRTHGSRQQREAVKR 504


>XP_010261422.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X2 [Nelumbo
            nucifera]
          Length = 942

 Score =  441 bits (1135), Expect = e-143
 Identities = 240/448 (53%), Positives = 293/448 (65%)
 Frame = +3

Query: 81   GFTGPANAYRAFASVAEEVSSTDVEDDVSAVDEIHSLLKQLSKEETGANCRTSRASEGNP 260
            G +  +N  + +ASVAE +SSTD E+DVS VDEI  LL+++SKEE               
Sbjct: 85   GLSRFSNHPKGYASVAEVLSSTDAEEDVSVVDEIQELLEEMSKEEK-------------- 130

Query: 261  APKHTMLPKEWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMSASRYKNLKR 440
                            E E  H   + L                     M   +Y  L+R
Sbjct: 131  ----------------ELEFSHQKQTKL------------------VGGMGQGKYLLLRR 156

Query: 441  RQIKIETEAWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLIEEEQKLCRE 620
            RQ+KIETEAWEQAAKEYKELL DMC+ KLAPNLPY+KSLF+GWFEPL+  I  EQ+LCR+
Sbjct: 157  RQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRK 216

Query: 621  GRNKTAYAPYFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGDAIEQEARIQ 800
            G+N+ AYAPYF QL  +MM+VITMHK++ LLMTG    S RVVQAA  +G AIE E RI 
Sbjct: 217  GKNRAAYAPYFDQLPAEMMSVITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIY 276

Query: 801  RFLDKTRNKGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQLYLRKKVTS 980
            +FL+KT+ K  K +K   +G     G+ D ++ E+Q+                LRKKVT 
Sbjct: 277  KFLEKTKKKTDKDKK--AEG-----GESDPAIKEQQR----------------LRKKVTD 313

Query: 981  LMKKQKLYQVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQSVDGPPDIR 1160
            LMKKQKL QVR+IVK  D++KPW Q+  AKVGS LIE L+ +AYIQ P  Q  DGPPDIR
Sbjct: 314  LMKKQKLQQVRQIVKSQDDSKPWGQDAQAKVGSHLIELLMQTAYIQSPADQLADGPPDIR 373

Query: 1161 PAFRRVVKNLISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPMLVPPVNWTG 1340
            PAFR  +K +  E +   +  R+YG+IECDPLV++GL+RTARHMVIPYMPMLVPP+NWTG
Sbjct: 374  PAFRHTLKTITKESQ---KTSRRYGLIECDPLVRKGLERTARHMVIPYMPMLVPPLNWTG 430

Query: 1341 YDKGAHFFLPSYVMRTHGARQQREAVKR 1424
            YDKGA+ FLPSYVMRTHGARQQREAVKR
Sbjct: 431  YDKGAYLFLPSYVMRTHGARQQREAVKR 458


>XP_010261414.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Nelumbo
            nucifera]
          Length = 990

 Score =  441 bits (1135), Expect = e-142
 Identities = 240/448 (53%), Positives = 293/448 (65%)
 Frame = +3

Query: 81   GFTGPANAYRAFASVAEEVSSTDVEDDVSAVDEIHSLLKQLSKEETGANCRTSRASEGNP 260
            G +  +N  + +ASVAE +SSTD E+DVS VDEI  LL+++SKEE               
Sbjct: 85   GLSRFSNHPKGYASVAEVLSSTDAEEDVSVVDEIQELLEEMSKEEK-------------- 130

Query: 261  APKHTMLPKEWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMSASRYKNLKR 440
                            E E  H   + L                     M   +Y  L+R
Sbjct: 131  ----------------ELEFSHQKQTKL------------------VGGMGQGKYLLLRR 156

Query: 441  RQIKIETEAWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLIEEEQKLCRE 620
            RQ+KIETEAWEQAAKEYKELL DMC+ KLAPNLPY+KSLF+GWFEPL+  I  EQ+LCR+
Sbjct: 157  RQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRK 216

Query: 621  GRNKTAYAPYFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGDAIEQEARIQ 800
            G+N+ AYAPYF QL  +MM+VITMHK++ LLMTG    S RVVQAA  +G AIE E RI 
Sbjct: 217  GKNRAAYAPYFDQLPAEMMSVITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIY 276

Query: 801  RFLDKTRNKGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQLYLRKKVTS 980
            +FL+KT+ K  K +K   +G     G+ D ++ E+Q+                LRKKVT 
Sbjct: 277  KFLEKTKKKTDKDKK--AEG-----GESDPAIKEQQR----------------LRKKVTD 313

Query: 981  LMKKQKLYQVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQSVDGPPDIR 1160
            LMKKQKL QVR+IVK  D++KPW Q+  AKVGS LIE L+ +AYIQ P  Q  DGPPDIR
Sbjct: 314  LMKKQKLQQVRQIVKSQDDSKPWGQDAQAKVGSHLIELLMQTAYIQSPADQLADGPPDIR 373

Query: 1161 PAFRRVVKNLISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPMLVPPVNWTG 1340
            PAFR  +K +  E +   +  R+YG+IECDPLV++GL+RTARHMVIPYMPMLVPP+NWTG
Sbjct: 374  PAFRHTLKTITKESQ---KTSRRYGLIECDPLVRKGLERTARHMVIPYMPMLVPPLNWTG 430

Query: 1341 YDKGAHFFLPSYVMRTHGARQQREAVKR 1424
            YDKGA+ FLPSYVMRTHGARQQREAVKR
Sbjct: 431  YDKGAYLFLPSYVMRTHGARQQREAVKR 458


>XP_020109467.1 DNA-directed RNA polymerase 1B, mitochondrial-like [Ananas comosus]
          Length = 890

 Score =  437 bits (1125), Expect = e-142
 Identities = 218/339 (64%), Positives = 264/339 (77%)
 Frame = +3

Query: 408  MSASRYKNLKRRQIKIETEAWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKS 587
            M + +Y  L+RRQIKIETEAWEQAAKEYKELL DMC+ KLAPNLPYVKSLF+GWFEPL+ 
Sbjct: 46   MGSGKYAMLRRRQIKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYVKSLFLGWFEPLRD 105

Query: 588  LIEEEQKLCREGRNKTAYAPYFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISV 767
             I  EQ  CR+G+N+ ++APYF QL  DMMAVITMHK+M+LLMTG G  S+RVVQAA  V
Sbjct: 106  QIALEQDHCRDGKNRASHAPYFNQLPADMMAVITMHKLMSLLMTGSGDGSVRVVQAACQV 165

Query: 768  GDAIEQEARIQRFLDKTRNKGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVK 947
            G+AIEQEARI +FL+KTR +  K +          +   D SVT+EQ+            
Sbjct: 166  GEAIEQEARIHKFLEKTRKRAYKDKTN--------EDIEDDSVTKEQE------------ 205

Query: 948  DQLYLRKKVTSLMKKQKLYQVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPV 1127
               +LRK+VT+LMK+QK++QVR+IVK+  ++KPW Q+  AKVGSRLIE L+++AYIQPPV
Sbjct: 206  ---FLRKRVTNLMKQQKVHQVRRIVKEQGDSKPWGQDAQAKVGSRLIELLMETAYIQPPV 262

Query: 1128 TQSVDGPPDIRPAFRRVVKNLISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYM 1307
            TQ+ DGPPDIRPAFR  ++ +  E++   +  R+YGVIECDPLV+QGLDRTARHMVIPYM
Sbjct: 263  TQAADGPPDIRPAFRHSLRTVTKEQQ---KTSRRYGVIECDPLVRQGLDRTARHMVIPYM 319

Query: 1308 PMLVPPVNWTGYDKGAHFFLPSYVMRTHGARQQREAVKR 1424
            PMLVPPVNW GYDKGAH FLPSY+MR HGARQQREAVKR
Sbjct: 320  PMLVPPVNWMGYDKGAHLFLPSYIMRIHGARQQREAVKR 358


>XP_010257888.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score =  440 bits (1131), Expect = e-141
 Identities = 243/443 (54%), Positives = 291/443 (65%)
 Frame = +3

Query: 96   ANAYRAFASVAEEVSSTDVEDDVSAVDEIHSLLKQLSKEETGANCRTSRASEGNPAPKHT 275
            +N  + +ASVAE V S D E+D+SA+DEI  LL     EE G                  
Sbjct: 130  SNHPKGYASVAEAVCSMDAEEDLSAIDEIQELL-----EEMGKE---------------- 168

Query: 276  MLPKEWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMSASRYKNLKRRQIKI 455
               K+ L    + +     G                        M   +Y  L+RRQ+KI
Sbjct: 169  --EKKELELRDQKQIKLVGG------------------------MGQGKYLLLRRRQVKI 202

Query: 456  ETEAWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLIEEEQKLCREGRNKT 635
            ETEAWEQAAKEY+ELL DMC+ KLAPNLPY+KSLF+GWFEPL+  I  EQ+LCR+G+N+T
Sbjct: 203  ETEAWEQAAKEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELCRKGKNRT 262

Query: 636  AYAPYFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGDAIEQEARIQRFLDK 815
            AYAPYF QL  +MM+VITMHK+M LLMTG    S RVVQAA  +G+AIE E RI +FL+K
Sbjct: 263  AYAPYFDQLPAEMMSVITMHKLMGLLMTGGEHGSCRVVQAACQIGEAIENEVRIHKFLEK 322

Query: 816  TRNKGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQLYLRKKVTSLMKKQ 995
            TR K  K +K   DG     G+ D  + E+Q+                LRKKVT LMKKQ
Sbjct: 323  TRKKTDKDKK--ADG-----GESDPVIKEQQR----------------LRKKVTDLMKKQ 359

Query: 996  KLYQVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQSVDGPPDIRPAFRR 1175
            KL QVR+IVK  D++KPW Q+  AKVGSRLIE L+ +AYIQPPV Q  DGPPDIRPAFR 
Sbjct: 360  KLQQVRQIVKGQDDSKPWGQDAQAKVGSRLIELLMQTAYIQPPVDQLADGPPDIRPAFRH 419

Query: 1176 VVKNLISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPMLVPPVNWTGYDKGA 1355
             +K +  E +   +  R+YGVIECDPLV++GL+RTARHMVIPYMPMLVPPVNWTGYDKGA
Sbjct: 420  SLKTVTKEAQ---KTSRRYGVIECDPLVRKGLERTARHMVIPYMPMLVPPVNWTGYDKGA 476

Query: 1356 HFFLPSYVMRTHGARQQREAVKR 1424
            + FLPSYVMRTHGARQQREAVKR
Sbjct: 477  YLFLPSYVMRTHGARQQREAVKR 499


>XP_010943346.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X2 [Elaeis
            guineensis]
          Length = 1036

 Score =  437 bits (1125), Expect = e-140
 Identities = 234/439 (53%), Positives = 286/439 (65%)
 Frame = +3

Query: 108  RAFASVAEEVSSTDVEDDVSAVDEIHSLLKQLSKEETGANCRTSRASEGNPAPKHTMLPK 287
            R FA VAE V+STD++++ S+++EI SLL++ S  E   + + S  SE  P       PK
Sbjct: 128  RGFADVAEAVASTDLDEEASSIEEIQSLLEETSTVEVAEDWKLSDRSEKLPQKAQREEPK 187

Query: 288  EWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMSASRYKNLKRRQIKIETEA 467
            +  G                                    M A +Y  L++RQIKIETEA
Sbjct: 188  KVSG------------------------------------MGAKKYAKLRQRQIKIETEA 211

Query: 468  WEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLIEEEQKLCREGRNKTAYAP 647
            WEQAAKEYKELL DMC+ KLAPNLPYVKSL +GWFEP +  I  EQ+ CRE RN+ AY P
Sbjct: 212  WEQAAKEYKELLQDMCEQKLAPNLPYVKSLLLGWFEPFRDKIAAEQEKCREVRNRAAYGP 271

Query: 648  YFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGDAIEQEARIQRFLDKTRNK 827
            Y  QL  DMMAVITMHK+M+LLMT     S+ VVQAA  VG AIEQE +I RFL+K++ K
Sbjct: 272  YIGQLPADMMAVITMHKLMSLLMTSGSNGSVLVVQAACQVGSAIEQEVKIHRFLEKSKKK 331

Query: 828  GAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQLYLRKKVTSLMKKQKLYQ 1007
                                   T   + +GS    +  K+Q  LRK+VT+LMKKQKL Q
Sbjct: 332  -----------------------TNIDKKSGSAEVDNITKEQELLRKRVTNLMKKQKLQQ 368

Query: 1008 VRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQSVDGPPDIRPAFRRVVKN 1187
            VRKIVK  D++KPW Q+  AKVGSRLIE L+++AYIQPP+ Q  D PPDIRPAFR  ++N
Sbjct: 369  VRKIVKGQDDSKPWGQDTQAKVGSRLIELLVETAYIQPPINQLADSPPDIRPAFRHYLRN 428

Query: 1188 LISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPMLVPPVNWTGYDKGAHFFL 1367
            +  E++   +I R+YG IECDPLV+QGLDRTARHMVIPYMPMLVPP++W  YDKGAH FL
Sbjct: 429  VQKEQK---KISRRYGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWQRYDKGAHLFL 485

Query: 1368 PSYVMRTHGARQQREAVKR 1424
            PSYVMRTHG+RQQR AVKR
Sbjct: 486  PSYVMRTHGSRQQRAAVKR 504


>XP_010943345.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Elaeis
            guineensis]
          Length = 1042

 Score =  437 bits (1125), Expect = e-140
 Identities = 234/439 (53%), Positives = 286/439 (65%)
 Frame = +3

Query: 108  RAFASVAEEVSSTDVEDDVSAVDEIHSLLKQLSKEETGANCRTSRASEGNPAPKHTMLPK 287
            R FA VAE V+STD++++ S+++EI SLL++ S  E   + + S  SE  P       PK
Sbjct: 128  RGFADVAEAVASTDLDEEASSIEEIQSLLEETSTVEVAEDWKLSDRSEKLPQKAQREEPK 187

Query: 288  EWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMSASRYKNLKRRQIKIETEA 467
            +  G                                    M A +Y  L++RQIKIETEA
Sbjct: 188  KVSG------------------------------------MGAKKYAKLRQRQIKIETEA 211

Query: 468  WEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLIEEEQKLCREGRNKTAYAP 647
            WEQAAKEYKELL DMC+ KLAPNLPYVKSL +GWFEP +  I  EQ+ CRE RN+ AY P
Sbjct: 212  WEQAAKEYKELLQDMCEQKLAPNLPYVKSLLLGWFEPFRDKIAAEQEKCREVRNRAAYGP 271

Query: 648  YFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGDAIEQEARIQRFLDKTRNK 827
            Y  QL  DMMAVITMHK+M+LLMT     S+ VVQAA  VG AIEQE +I RFL+K++ K
Sbjct: 272  YIGQLPADMMAVITMHKLMSLLMTSGSNGSVLVVQAACQVGSAIEQEVKIHRFLEKSKKK 331

Query: 828  GAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQLYLRKKVTSLMKKQKLYQ 1007
                                   T   + +GS    +  K+Q  LRK+VT+LMKKQKL Q
Sbjct: 332  -----------------------TNIDKKSGSAEVDNITKEQELLRKRVTNLMKKQKLQQ 368

Query: 1008 VRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQSVDGPPDIRPAFRRVVKN 1187
            VRKIVK  D++KPW Q+  AKVGSRLIE L+++AYIQPP+ Q  D PPDIRPAFR  ++N
Sbjct: 369  VRKIVKGQDDSKPWGQDTQAKVGSRLIELLVETAYIQPPINQLADSPPDIRPAFRHYLRN 428

Query: 1188 LISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPMLVPPVNWTGYDKGAHFFL 1367
            +  E++   +I R+YG IECDPLV+QGLDRTARHMVIPYMPMLVPP++W  YDKGAH FL
Sbjct: 429  VQKEQK---KISRRYGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWQRYDKGAHLFL 485

Query: 1368 PSYVMRTHGARQQREAVKR 1424
            PSYVMRTHG+RQQR AVKR
Sbjct: 486  PSYVMRTHGSRQQRAAVKR 504


>XP_015880486.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Ziziphus jujuba]
            XP_015880487.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Ziziphus jujuba]
          Length = 1028

 Score =  437 bits (1124), Expect = e-140
 Identities = 249/478 (52%), Positives = 303/478 (63%), Gaps = 4/478 (0%)
 Frame = +3

Query: 3    FGEAGCRKNRDMVS--SPVG-FRYDLVQRGFTGPANAY-RAFASVAEEVSSTDVEDDVSA 170
            F E G  +N ++ S   PV    Y  V+    G      + +ASVAE VSST+VEDD+SA
Sbjct: 93   FSETGFCRNGEISSHDDPVSRLGYGFVRNQVAGNIGICPKGYASVAEAVSSTEVEDDISA 152

Query: 171  VDEIHSLLKQLSKEETGANCRTSRASEGNPAPKHTMLPKEWLGSNPESENGHTNGSSLPR 350
             +EI  LL+Q++KEE                       KE L       N   N   + R
Sbjct: 153  GEEIQELLQQMNKEEK----------------------KEIL-------NMRRNHQKMVR 183

Query: 351  TXXXXXXXXXXXXXXXXXHMSASRYKNLKRRQIKIETEAWEQAAKEYKELLADMCQHKLA 530
                               M   +Y+ L+RRQ+KIETEAWEQA KEYKELL DMC+ KLA
Sbjct: 184  G------------------MGEKKYQVLRRRQVKIETEAWEQALKEYKELLMDMCEQKLA 225

Query: 531  PNLPYVKSLFMGWFEPLKSLIEEEQKLCREGRNKTAYAPYFIQLHPDMMAVITMHKIMAL 710
            PNLPY+KSLF+GWFEPL++ I +EQ+LCR+G+NK AYAPYF QL  +MMAVITMHK+M L
Sbjct: 226  PNLPYMKSLFLGWFEPLRNAIAKEQELCRQGKNKPAYAPYFDQLPAEMMAVITMHKLMGL 285

Query: 711  LMTGDGTASIRVVQAAISVGDAIEQEARIQRFLDKTRNKGAKQQKPGTDGAGQLQGDGDS 890
            LMTG    + RVV AA  +GDAIEQE RIQRFL+KTR K   + K       + +G  D+
Sbjct: 286  LMTGGEHGTARVVPAACIIGDAIEQEVRIQRFLEKTRKKKLGKDK-------EDEGYEDT 338

Query: 891  SVTEEQQDTGSDVATSPVKDQLYLRKKVTSLMKKQKLYQVRKIVKQHDETKPWSQEMHAK 1070
             + E++                 L+KKVT LMKKQKL  VR+IVK+ D+ K W Q+  AK
Sbjct: 339  MIKEQK-----------------LKKKVTDLMKKQKLRAVRQIVKRQDDLKSWGQDARAK 381

Query: 1071 VGSRLIEFLLDSAYIQPPVTQSVDGPPDIRPAFRRVVKNLISEKRGGPRIQRQYGVIECD 1250
            VGSRLIE L ++A+IQPP  QS DGPPD+RPAF    + ++   +      R+YGVIECD
Sbjct: 382  VGSRLIELLTETAHIQPPADQSADGPPDVRPAFLHTFRTVV---KNAKNTGRRYGVIECD 438

Query: 1251 PLVQQGLDRTARHMVIPYMPMLVPPVNWTGYDKGAHFFLPSYVMRTHGARQQREAVKR 1424
            PLV +GLDRTARHMVIPYMPMLVPPVNWTGYDKG H +LPSYVMRTHGARQQREAVKR
Sbjct: 439  PLVLKGLDRTARHMVIPYMPMLVPPVNWTGYDKGGHLYLPSYVMRTHGARQQREAVKR 496


>XP_010660553.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] CBI16911.3 unnamed protein product,
            partial [Vitis vinifera]
          Length = 1035

 Score =  430 bits (1105), Expect = e-137
 Identities = 244/451 (54%), Positives = 290/451 (64%), Gaps = 1/451 (0%)
 Frame = +3

Query: 75   QRGFTGPANAYRAFASVAEEVSSTDVEDDVSAVDEIHSLLKQLSKEETGANCRTSRASEG 254
            Q GF+G     +++ASVAE VSSTDVE+DVSA DEI  LL ++ K+E        R  + 
Sbjct: 127  QMGFSGFCP--KSYASVAEAVSSTDVEEDVSASDEIQELLGEM-KKEEKRQVNFKRREK- 182

Query: 255  NPAPKHTMLPKEWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMSASRYKNL 434
                              + E G                            M   RY  L
Sbjct: 183  -----------------LKMERG----------------------------MEQGRYLRL 197

Query: 435  KRRQIKIETEAWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLIEEEQKLC 614
            +RRQ+KIETEAWE AAKEYKELL DMC+ KLAPNLPY+KSLF+GWFEPL+  I +EQ+LC
Sbjct: 198  RRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELC 257

Query: 615  REGRNKTAYAPYFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGDAIEQEAR 794
            R G+NK AYAPYF QL  DMM+VITMHK++ LLMTG    S RVVQAA  +GDAIEQE R
Sbjct: 258  RLGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVR 317

Query: 795  IQRFLDKTRNKGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQLYLRKKV 974
            I  FL+KT+ K   + K        ++G G   V  EQ+                LRKKV
Sbjct: 318  IHNFLEKTKRKKVGKDK-------NVEGGGFDPVIHEQEK---------------LRKKV 355

Query: 975  TSLMKKQKLYQVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPV-TQSVDGPP 1151
            T+LMKKQKL+  R+IVK HD +KPW  E  AKVGSRLIE L+ +AYIQPPV  Q  D PP
Sbjct: 356  TNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPP 415

Query: 1152 DIRPAFRRVVKNLISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPMLVPPVN 1331
            DIRPAF    K ++ E +   +I R++GVIECDPLV++GL+RTARHMVIPY+PMLVPP+ 
Sbjct: 416  DIRPAFVHTFKTVMREAK---KIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLK 472

Query: 1332 WTGYDKGAHFFLPSYVMRTHGARQQREAVKR 1424
            WTGYDKGAH FLPSYVMRTHGARQQREAVKR
Sbjct: 473  WTGYDKGAHLFLPSYVMRTHGARQQREAVKR 503


>XP_002267464.1 PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  428 bits (1100), Expect = e-137
 Identities = 232/457 (50%), Positives = 293/457 (64%)
 Frame = +3

Query: 54   GFRYDLVQRGFTGPANAYRAFASVAEEVSSTDVEDDVSAVDEIHSLLKQLSKEETGANCR 233
            GF        F G     + +AS AE ++S   E+D+S VDE+  L+++++K +      
Sbjct: 73   GFGVTKTPVNFFGLFGYQKGYASAAEAIAS---EEDMSGVDEVQELVEEVNKGDK----- 124

Query: 234  TSRASEGNPAPKHTMLPKEWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMS 413
                                L   P+   G   G                          
Sbjct: 125  --------------------LEKQPKLIGGVAQG-------------------------- 138

Query: 414  ASRYKNLKRRQIKIETEAWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLI 593
              ++  L+RRQIK+ETEAWE+AAKEY+ELL+DMC+ KLAPNLPY+KSLF+GWFEPL+ +I
Sbjct: 139  --KHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVI 196

Query: 594  EEEQKLCREGRNKTAYAPYFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGD 773
              EQ LC++G+N+ AYAPYF  L  DMMAVITMHK+M LLMTG+G  S RVVQAA  +G+
Sbjct: 197  AAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLMGLLMTGEGNGSARVVQAACHIGE 256

Query: 774  AIEQEARIQRFLDKTRNKGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQ 953
            AIE E RIQRF++KT+ K A    P  DG       G + VT+EQ+              
Sbjct: 257  AIEHEVRIQRFMEKTKKKSASSNNP--DG-------GSNPVTKEQEK------------- 294

Query: 954  LYLRKKVTSLMKKQKLYQVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQ 1133
              LRKKV+ LMKKQKL QVR+IVK+ D++KPW Q+ + KVGSRLIE L+++AYIQPP  Q
Sbjct: 295  --LRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQ 352

Query: 1134 SVDGPPDIRPAFRRVVKNLISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPM 1313
              DGPPDIRPAF   +K +I E + G    R+YGVIECDPLV++GL++TARHMVIPYMPM
Sbjct: 353  LGDGPPDIRPAFVHTLKTVIKETQKG---TRRYGVIECDPLVRKGLEKTARHMVIPYMPM 409

Query: 1314 LVPPVNWTGYDKGAHFFLPSYVMRTHGARQQREAVKR 1424
            LVPP+NWTGYDKGA+ FLPSYVMR HGARQQREA+KR
Sbjct: 410  LVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKR 446


>ONK55019.1 uncharacterized protein A4U43_UnF8500 [Asparagus officinalis]
          Length = 1023

 Score =  426 bits (1094), Expect = e-136
 Identities = 240/457 (52%), Positives = 290/457 (63%), Gaps = 6/457 (1%)
 Frame = +3

Query: 72   VQRGFTGPANAYRAFASVAEE------VSSTDVEDDVSAVDEIHSLLKQLSKEETGANCR 233
            V R FTG     R+FASVAE        SSTD ++      EI  +L++LSK +      
Sbjct: 106  VPRFFTGT----RSFASVAEAEVEVEAASSTDADEAA----EIQEILEELSKVQV----- 152

Query: 234  TSRASEGNPAPKHTMLPKEWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMS 413
               ++  N A ++T   +     N E       G                        M 
Sbjct: 153  ---STSNNAASENTNRKR-----NFEKTQHRPLG------------------------MG 180

Query: 414  ASRYKNLKRRQIKIETEAWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLI 593
              +Y  L+RRQIKIETEAWEQAAKEYKELLADMC+ KLAPNLPYVKSLF+GWFEP +  I
Sbjct: 181  TGKYAILRRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFRDAI 240

Query: 594  EEEQKLCREGRNKTAYAPYFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGD 773
             +E+K+C + + K ++  YF +L  DMMAVITMHK+M+LLMTG G  S+RVVQAA  VG+
Sbjct: 241  LKERKICEDPKCKASHRAYFNKLPADMMAVITMHKLMSLLMTGVGDGSVRVVQAACHVGE 300

Query: 774  AIEQEARIQRFLDKTRNKGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQ 953
            AIEQE RI RFL+KT+ K AK                         D G     S  K+Q
Sbjct: 301  AIEQEVRIHRFLEKTKKKPAK-----------------------ASDNGDGEVDSSAKEQ 337

Query: 954  LYLRKKVTSLMKKQKLYQVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQ 1133
              +RKKVT+LMK  KL+QVRKIVK  D+ +PW QE  AKVGSRLIE L+D+AYIQPPV Q
Sbjct: 338  EIIRKKVTNLMKMHKLHQVRKIVKGQDDCRPWGQEAQAKVGSRLIELLMDTAYIQPPVDQ 397

Query: 1134 SVDGPPDIRPAFRRVVKNLISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPM 1313
              +GPPDIRPAFR  ++ +  E     ++ R+YGVIECDP+V+QGLDRTARHMVIPY+PM
Sbjct: 398  KAEGPPDIRPAFRHSLRTVTKEHH---KMSRRYGVIECDPIVRQGLDRTARHMVIPYVPM 454

Query: 1314 LVPPVNWTGYDKGAHFFLPSYVMRTHGARQQREAVKR 1424
            LVPP+NWTGYDKG H FLPSYVMR HGARQQREAVKR
Sbjct: 455  LVPPINWTGYDKGGHLFLPSYVMRIHGARQQREAVKR 491


>KQL23893.1 hypothetical protein SETIT_0288241mg, partial [Setaria italica]
          Length = 712

 Score =  415 bits (1066), Expect = e-135
 Identities = 206/339 (60%), Positives = 256/339 (75%)
 Frame = +3

Query: 408  MSASRYKNLKRRQIKIETEAWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKS 587
            M+  +Y +L+RRQI++ETEAWEQAAKEY+ELL DMC+ KLAPNLPY+KSLF+GWFEPL+ 
Sbjct: 127  MTYHKYASLRRRQIRVETEAWEQAAKEYRELLTDMCEQKLAPNLPYIKSLFLGWFEPLRD 186

Query: 588  LIEEEQKLCREGRNKTAYAPYFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISV 767
             I  EQ+L     ++ ++ PYF  L  DMMAVITMHK+M LLMTG G  S+RV+QAA  +
Sbjct: 187  QIAAEQELVANRGSRASHGPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQI 246

Query: 768  GDAIEQEARIQRFLDKTRNKGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVK 947
            G+AIE E RI RFL+KTR K  K+++                   E++   SD+A    K
Sbjct: 247  GEAIEHEVRIHRFLEKTRKKSNKEKE------------------NEEEIFDSDIA----K 284

Query: 948  DQLYLRKKVTSLMKKQKLYQVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPV 1127
            +Q  LRKKVT LMKKQKL QVRKIVK  D+++PW Q+ HAKVGSRLIE  +++A+IQPP 
Sbjct: 285  EQQRLRKKVTDLMKKQKLRQVRKIVKNQDDSRPWGQDAHAKVGSRLIELFIETAHIQPPA 344

Query: 1128 TQSVDGPPDIRPAFRRVVKNLISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYM 1307
            +QS DG PDIRPAFR  ++ +  E++   +  R+YGVI+CDPLV+QGLDRTA+HMVIPYM
Sbjct: 345  SQSSDGLPDIRPAFRHEMRTVPKEQQ---KHSRRYGVIKCDPLVRQGLDRTAKHMVIPYM 401

Query: 1308 PMLVPPVNWTGYDKGAHFFLPSYVMRTHGARQQREAVKR 1424
            PML+PP+ WTGYDKGAH FLPSYVMRTHGARQQREAVKR
Sbjct: 402  PMLIPPICWTGYDKGAHLFLPSYVMRTHGARQQREAVKR 440


>XP_006844103.1 PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Amborella
            trichopoda] ERN05778.1 hypothetical protein
            AMTR_s00006p00254180 [Amborella trichopoda]
          Length = 1006

 Score =  420 bits (1079), Expect = e-134
 Identities = 224/439 (51%), Positives = 286/439 (65%), Gaps = 1/439 (0%)
 Frame = +3

Query: 108  RAFASVAEEVSSTDVEDDVSA-VDEIHSLLKQLSKEETGANCRTSRASEGNPAPKHTMLP 284
            + FA+ AE V STD+++D S+  +E H +L        GA     R       PK     
Sbjct: 104  KGFANAAEAVVSTDIDEDCSSGSEETHLVLPTNGYNSNGA----IREEREKLKPK----- 154

Query: 285  KEWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMSASRYKNLKRRQIKIETE 464
                       NG+ +G                        M  ++Y  L+ RQ+KIETE
Sbjct: 155  -----------NGYKDGV-----------------------MGKAKYLALRTRQVKIETE 180

Query: 465  AWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLIEEEQKLCREGRNKTAYA 644
            AW+QAAKEY+EL+ DMC+HKLAPNLPY+KSLF+GWFEPL+ +I  EQ   + G+NK AYA
Sbjct: 181  AWDQAAKEYRELMMDMCEHKLAPNLPYMKSLFLGWFEPLRDIIASEQASYKAGKNKGAYA 240

Query: 645  PYFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGDAIEQEARIQRFLDKTRN 824
            PYF+QL  DMM+VITMHK+M LLMTG    S R+VQAA  +G+AIEQE +I RF +KT+ 
Sbjct: 241  PYFMQLPADMMSVITMHKLMGLLMTGTDNGSTRLVQAACQIGEAIEQEVKIHRFFEKTKK 300

Query: 825  KGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQLYLRKKVTSLMKKQKLY 1004
            K  K++K   DG    +GD                     K++  LRK+VT+LMKKQKL+
Sbjct: 301  KSDKEKK--LDGEEPNEGD---------------------KEKESLRKRVTNLMKKQKLH 337

Query: 1005 QVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQSVDGPPDIRPAFRRVVK 1184
            QVRKIVK  D+ KPW  ++HAKVGSRLIE L+++AY+QPPV QS +GPPDIRPAFR ++K
Sbjct: 338  QVRKIVKGQDDAKPWGIDIHAKVGSRLIELLIETAYVQPPVDQSAEGPPDIRPAFRHILK 397

Query: 1185 NLISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPMLVPPVNWTGYDKGAHFF 1364
             +    +   +I+R+YGVIECDPL+ +GL++TARHMVIPYMPMLVPPV WTGYD+G H F
Sbjct: 398  TV---TKNDQKIRRRYGVIECDPLICKGLEKTARHMVIPYMPMLVPPVKWTGYDRGGHLF 454

Query: 1365 LPSYVMRTHGARQQREAVK 1421
            LPSYVMR HGARQQR A+K
Sbjct: 455  LPSYVMRIHGARQQRYAIK 473


>XP_018816700.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            isoform X3 [Juglans regia]
          Length = 891

 Score =  417 bits (1071), Expect = e-134
 Identities = 229/442 (51%), Positives = 281/442 (63%), Gaps = 3/442 (0%)
 Frame = +3

Query: 108  RAFASVAEE--VSSTDVEDDVSAVDEIHS-LLKQLSKEETGANCRTSRASEGNPAPKHTM 278
            R +AS+AE   VSSTDVE+DVS  +E+   L +   +E+   + R  R  +         
Sbjct: 88   RGYASLAEAEVVSSTDVEEDVSVAEEVQELLQEMSKEEKRQVDYRRRRQQK--------- 138

Query: 279  LPKEWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMSASRYKNLKRRQIKIE 458
                                                       M   +Y  L+RRQ+KIE
Sbjct: 139  ---------------------------------------MARGMGQGKYHLLRRRQVKIE 159

Query: 459  TEAWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLIEEEQKLCREGRNKTA 638
            TEAWEQAAKEYKELL  MC  KLAPNLPY+KSLF+GWFEPL+  IE+EQ+LCR G+NK A
Sbjct: 160  TEAWEQAAKEYKELLMVMCAQKLAPNLPYMKSLFLGWFEPLRDAIEKEQQLCRNGKNKRA 219

Query: 639  YAPYFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGDAIEQEARIQRFLDKT 818
            YAPYF QL  DMM+VITMHK+  LLMTG    + RVVQAA  +GDAIEQE RI +FL+KT
Sbjct: 220  YAPYFEQLPADMMSVITMHKLTGLLMTGGEHGAARVVQAACMIGDAIEQEVRIHKFLEKT 279

Query: 819  RNKGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQLYLRKKVTSLMKKQK 998
            +      QK G +      GD +S + E++     ++      +Q  LRKKVT+LMKKQK
Sbjct: 280  K------QKKGNEDKENEGGDSNSLIKEQE-----ELLIKKKGEQEELRKKVTNLMKKQK 328

Query: 999  LYQVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQSVDGPPDIRPAFRRV 1178
            L  VR+IVK  D++KPW Q+  AKVGSRLIE L+ +AYIQPP  Q  DGPPDIRPAF   
Sbjct: 329  LVAVRQIVKGKDDSKPWGQDAKAKVGSRLIELLMQTAYIQPPANQLADGPPDIRPAFVHS 388

Query: 1179 VKNLISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPMLVPPVNWTGYDKGAH 1358
             + ++ E   G +  R+YG+IEC+PLV +GL+RT RHMVIPYMPMLVPPV WTGYDKG H
Sbjct: 389  FRTVMKE---GKKRSRRYGIIECNPLVLKGLERTVRHMVIPYMPMLVPPVKWTGYDKGGH 445

Query: 1359 FFLPSYVMRTHGARQQREAVKR 1424
             FLPSY+MRTHG+R QREAVKR
Sbjct: 446  LFLPSYIMRTHGSRHQREAVKR 467


>XP_018816699.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X2 [Juglans regia]
          Length = 926

 Score =  417 bits (1071), Expect = e-133
 Identities = 229/442 (51%), Positives = 281/442 (63%), Gaps = 3/442 (0%)
 Frame = +3

Query: 108  RAFASVAEE--VSSTDVEDDVSAVDEIHS-LLKQLSKEETGANCRTSRASEGNPAPKHTM 278
            R +AS+AE   VSSTDVE+DVS  +E+   L +   +E+   + R  R  +         
Sbjct: 88   RGYASLAEAEVVSSTDVEEDVSVAEEVQELLQEMSKEEKRQVDYRRRRQQK--------- 138

Query: 279  LPKEWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMSASRYKNLKRRQIKIE 458
                                                       M   +Y  L+RRQ+KIE
Sbjct: 139  ---------------------------------------MARGMGQGKYHLLRRRQVKIE 159

Query: 459  TEAWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLIEEEQKLCREGRNKTA 638
            TEAWEQAAKEYKELL  MC  KLAPNLPY+KSLF+GWFEPL+  IE+EQ+LCR G+NK A
Sbjct: 160  TEAWEQAAKEYKELLMVMCAQKLAPNLPYMKSLFLGWFEPLRDAIEKEQQLCRNGKNKRA 219

Query: 639  YAPYFIQLHPDMMAVITMHKIMALLMTGDGTASIRVVQAAISVGDAIEQEARIQRFLDKT 818
            YAPYF QL  DMM+VITMHK+  LLMTG    + RVVQAA  +GDAIEQE RI +FL+KT
Sbjct: 220  YAPYFEQLPADMMSVITMHKLTGLLMTGGEHGAARVVQAACMIGDAIEQEVRIHKFLEKT 279

Query: 819  RNKGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQLYLRKKVTSLMKKQK 998
            +      QK G +      GD +S + E++     ++      +Q  LRKKVT+LMKKQK
Sbjct: 280  K------QKKGNEDKENEGGDSNSLIKEQE-----ELLIKKKGEQEELRKKVTNLMKKQK 328

Query: 999  LYQVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQSVDGPPDIRPAFRRV 1178
            L  VR+IVK  D++KPW Q+  AKVGSRLIE L+ +AYIQPP  Q  DGPPDIRPAF   
Sbjct: 329  LVAVRQIVKGKDDSKPWGQDAKAKVGSRLIELLMQTAYIQPPANQLADGPPDIRPAFVHS 388

Query: 1179 VKNLISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPMLVPPVNWTGYDKGAH 1358
             + ++ E   G +  R+YG+IEC+PLV +GL+RT RHMVIPYMPMLVPPV WTGYDKG H
Sbjct: 389  FRTVMKE---GKKRSRRYGIIECNPLVLKGLERTVRHMVIPYMPMLVPPVKWTGYDKGGH 445

Query: 1359 FFLPSYVMRTHGARQQREAVKR 1424
             FLPSY+MRTHG+R QREAVKR
Sbjct: 446  LFLPSYIMRTHGSRHQREAVKR 467


>XP_017637865.1 PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Gossypium
            arboreum]
          Length = 996

 Score =  418 bits (1074), Expect = e-133
 Identities = 230/448 (51%), Positives = 288/448 (64%), Gaps = 1/448 (0%)
 Frame = +3

Query: 84   FTGPANAYRAFASVAEEVSSTDVEDDVSAVDEIHSLLKQLSKEETGANCRTSRASEGNPA 263
            F+G    ++ +AS AE + S   EDD+S  +EI+ L++ + KEE                
Sbjct: 89   FSGKFWNFKGYASAAEAIVSN--EDDLSGSEEINELVEAMIKEER--------------- 131

Query: 264  PKHTMLPKEWLGSNPESENGHTNGSSLPRTXXXXXXXXXXXXXXXXXHMSASRYKNLKRR 443
                   KE     P+   G                            M  ++Y  LKRR
Sbjct: 132  -------KESFSKQPKIMVGG---------------------------MGLAKYNTLKRR 157

Query: 444  QIKIETEAWEQAAKEYKELLADMCQHKLAPNLPYVKSLFMGWFEPLKSLIEEEQKLCREG 623
            QIKIETEAWE+AAKEY+EL+ADMC+ KLAPNLPYVKSLF+GWFEPL+  I  EQ++C+ G
Sbjct: 158  QIKIETEAWEEAAKEYQELIADMCEQKLAPNLPYVKSLFLGWFEPLRDSIAAEQEVCK-G 216

Query: 624  RNKTAYAPYFIQLHPDMMAVITMHKIMALLMTGD-GTASIRVVQAAISVGDAIEQEARIQ 800
              K ++A YF +L  DMMAV+TMHK+M LLMT   GT  IRVVQAA  +G+AIE EARIQ
Sbjct: 217  NFKISHAAYFNELSADMMAVVTMHKLMGLLMTNTAGTGGIRVVQAACQIGEAIENEARIQ 276

Query: 801  RFLDKTRNKGAKQQKPGTDGAGQLQGDGDSSVTEEQQDTGSDVATSPVKDQLYLRKKVTS 980
            +FL+KT+ K    +K  T+   +    G  +  EE+                 LRKKVT 
Sbjct: 277  KFLEKTKKKSTTDKKSATESEPETTEQGKLAKNEEK-----------------LRKKVTQ 319

Query: 981  LMKKQKLYQVRKIVKQHDETKPWSQEMHAKVGSRLIEFLLDSAYIQPPVTQSVDGPPDIR 1160
            LMKKQK++QVR+IVK  D +KPW QE H KVG RLI+ L+++AYIQPPV Q  DGPPDIR
Sbjct: 320  LMKKQKVHQVREIVKGRDTSKPWGQEAHVKVGCRLIQLLMENAYIQPPVDQIGDGPPDIR 379

Query: 1161 PAFRRVVKNLISEKRGGPRIQRQYGVIECDPLVQQGLDRTARHMVIPYMPMLVPPVNWTG 1340
            PAF   +KN+I +   G R  R+YGVIECDPLV++GL++TA+HMVIPYMPMLVPP NWTG
Sbjct: 380  PAFVHALKNVIKD---GNRGSRRYGVIECDPLVRKGLEKTAKHMVIPYMPMLVPPQNWTG 436

Query: 1341 YDKGAHFFLPSYVMRTHGARQQREAVKR 1424
            YD+GA+ FLPSYVMRTHGA+QQREAVKR
Sbjct: 437  YDQGAYLFLPSYVMRTHGAKQQREAVKR 464