BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00034157
         (444 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU11040.1 hypothetical protein TSUD_113330 [Trifolium subterran...    58   5e-07
JAU99167.1 Copia protein, partial [Noccaea caerulescens]               54   6e-07
KYP63600.1 Retrovirus-related Pol polyprotein from transposon TN...    55   6e-06

>GAU11040.1 hypothetical protein TSUD_113330 [Trifolium subterraneum]
          Length = 1355

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = -2

Query: 188 IRFWSEAILTF-ILINQKLSFVLKGKTPYSVFHRPKRPFSFQARIFGCIAFVHNYDLEAD 12
           I FW E ILT   LIN+  S VL GKTPY + H  K+P     R+FGC+ +VHN + + D
Sbjct: 568 IEFWGECILTAGYLINRTPSLVLHGKTPYEILHG-KQPSLEHIRVFGCLCYVHNQNHKGD 626

Query: 11  K 9
           K
Sbjct: 627 K 627


>JAU99167.1 Copia protein, partial [Noccaea caerulescens]
          Length = 96

 Score = 54.3 bits (129), Expect = 6e-07
 Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = -2

Query: 188 IRFWSEAILTFI-LINQKLSFVLKGKTPYSVFHRPKRPFSFQARIFGCIAFVHNYDLEAD 12
           I+FW E ILT   LIN+  S +L+GKTPY + ++   P S   R+FGC+ + HN + + D
Sbjct: 29  IQFWGECILTAAYLINRTPSVLLQGKTPYELLYKTA-PSSSHLRVFGCLCYAHNQNHKGD 87

Query: 11  K 9
           K
Sbjct: 88  K 88


>KYP63600.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 334

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
 Frame = -2

Query: 236 VEICKTK*LVLTW*INIRFWSEAILTF-ILINQKLSFVLKGKTPYSVFHRPKRP-FSFQA 63
           VE  +T  L+L   + +  W +AILT   LIN+  S  L+ KTPYS+ + PK P F    
Sbjct: 191 VETVRT--LMLNTNVPVHHWGDAILTSCFLINRMPSSSLENKTPYSIIY-PKEPLFHVSP 247

Query: 62  RIFGCIAFVHNYDLEADKL 6
           R+FGC  FVHN     DKL
Sbjct: 248 RVFGCTCFVHNVSPGLDKL 266