BLASTX nr result
ID: Alisma22_contig00034078
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00034078
(309 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP_043933.1 hypothetical protein [Strawberry vein banding virus]... 150 3e-40
CCG14716.1 ORF V protein [Strawberry vein banding virus] 147 4e-39
ALF37644.1 putative reverse transcriptase [Strawberry vein bandi... 147 4e-39
AKB94071.1 ORF V protein [Strawberry vein banding virus] 147 4e-39
YP_009182100.1 polyprotein [Blueberry fruit drop associated viru... 140 1e-36
ABX80502.1 RdRp, partial [Cauliflower mosaic virus] 128 2e-33
ABX80501.1 RdRp, partial [Cauliflower mosaic virus] 128 2e-33
ABX80503.1 RdRp, partial [Carnation etched ring virus] 127 3e-33
ABX80504.1 RdRp, partial [Carnation etched ring virus] 127 4e-33
ABX80500.1 RdRp, partial [Cauliflower mosaic virus] 127 4e-33
YP_002519387.1 putative enzymatic polyprotein [Rudbeckia flower ... 130 5e-33
AHA91297.1 reverse transcriptase [Cauliflower mosaic virus] 129 1e-32
AHA91290.1 reverse transcriptase [Cauliflower mosaic virus] AHA9... 129 1e-32
AGT42175.1 reverse transcriptase [Cauliflower mosaic virus] 129 1e-32
BAO53526.1 reverse transcriptase [Cauliflower mosaic virus] 128 2e-32
AHA91342.1 reverse transcriptase [Cauliflower mosaic virus] AHA9... 128 2e-32
AHA91338.1 reverse transcriptase [Cauliflower mosaic virus] 128 2e-32
AHA91331.1 reverse transcriptase [Cauliflower mosaic virus] 128 2e-32
AHA91317.1 reverse transcriptase [Cauliflower mosaic virus] 128 2e-32
BAO53680.1 reverse transcriptase [Cauliflower mosaic virus] 128 2e-32
>NP_043933.1 hypothetical protein [Strawberry vein banding virus] CAA65970.1 ORF
V [Strawberry vein banding virus]
Length = 708
Score = 150 bits (378), Expect = 3e-40
Identities = 69/102 (67%), Positives = 79/102 (77%)
Frame = +2
Query: 2 SSPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCK 181
SSP FM RNHAEIKRGKARMV+NYK+LN HTK DGY LP+KE L+ GK YS FDCK
Sbjct: 315 SSPAFMVRNHAEIKRGKARMVINYKKLNDHTKGDGYLLPNKEQLLQRIGGKTFYSSFDCK 374
Query: 182 SGFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
SGF+Q+RL ++I LT FS PQGHY+W VMPF LK P I+Q
Sbjct: 375 SGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFGLKQAPAIFQ 416
>CCG14716.1 ORF V protein [Strawberry vein banding virus]
Length = 699
Score = 147 bits (370), Expect = 4e-39
Identities = 68/102 (66%), Positives = 79/102 (77%)
Frame = +2
Query: 2 SSPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCK 181
SSP FM RNHAEIKRGKARMV+NYK+LN +TK DGY LP+KE L+ GK YS FDCK
Sbjct: 306 SSPAFMVRNHAEIKRGKARMVINYKKLNDNTKGDGYLLPNKEQLLQRIGGKTYYSSFDCK 365
Query: 182 SGFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
SGF+Q+RL ++I LT FS PQGHY+W VMPF LK P I+Q
Sbjct: 366 SGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFGLKQAPAIFQ 407
>ALF37644.1 putative reverse transcriptase [Strawberry vein banding virus]
Length = 704
Score = 147 bits (370), Expect = 4e-39
Identities = 68/102 (66%), Positives = 79/102 (77%)
Frame = +2
Query: 2 SSPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCK 181
SSP FM RNHAEIKRGKARMV+NYK+LN +TK DGY LP+KE L+ GK YS FDCK
Sbjct: 311 SSPAFMVRNHAEIKRGKARMVINYKKLNDNTKGDGYLLPNKEQLLQRIGGKTYYSSFDCK 370
Query: 182 SGFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
SGF+Q+RL ++I LT FS PQGHY+W VMPF LK P I+Q
Sbjct: 371 SGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFGLKQAPAIFQ 412
>AKB94071.1 ORF V protein [Strawberry vein banding virus]
Length = 704
Score = 147 bits (370), Expect = 4e-39
Identities = 68/102 (66%), Positives = 79/102 (77%)
Frame = +2
Query: 2 SSPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCK 181
SSP FM RNHAEIKRGKARMV+NYK+LN +TK DGY LP+KE L+ GK YS FDCK
Sbjct: 311 SSPAFMVRNHAEIKRGKARMVINYKKLNDNTKGDGYLLPNKEQLLQRIGGKTYYSSFDCK 370
Query: 182 SGFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
SGF+Q+RL ++I LT FS PQGHY+W VMPF LK P I+Q
Sbjct: 371 SGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFGLKQAPAIFQ 412
>YP_009182100.1 polyprotein [Blueberry fruit drop associated virus] ALN12435.1
polyprotein [Blueberry fruit drop associated virus]
Length = 2597
Score = 140 bits (353), Expect = 1e-36
Identities = 64/102 (62%), Positives = 80/102 (78%)
Frame = +2
Query: 2 SSPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCK 181
SSP F RNHAEIKR KAR+V+NYK+LN+ TK DGYFLP+ ETL+ ++SKFDCK
Sbjct: 1736 SSPAFCVRNHAEIKRQKARIVINYKELNRVTKDDGYFLPNLETLVYQVAEARVFSKFDCK 1795
Query: 182 SGFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
SG++QI+L +SIPLT FSTP+G Y+W V+PF LKN P I+Q
Sbjct: 1796 SGYWQIKLTPESIPLTAFSTPKGQYEWKVLPFGLKNAPNIFQ 1837
>ABX80502.1 RdRp, partial [Cauliflower mosaic virus]
Length = 401
Score = 128 bits (322), Expect = 2e-33
Identities = 57/101 (56%), Positives = 75/101 (74%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
+P F+ N AE +RGK RMVVNYK +N+ T D Y LP+K+ L+ + RGK I+S FDCKS
Sbjct: 237 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKS 296
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S PLT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 297 GFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQ 337
>ABX80501.1 RdRp, partial [Cauliflower mosaic virus]
Length = 401
Score = 128 bits (322), Expect = 2e-33
Identities = 57/101 (56%), Positives = 75/101 (74%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
+P F+ N AE +RGK RMVVNYK +N+ T D Y LP+K+ L+ + RGK I+S FDCKS
Sbjct: 237 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKS 296
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S PLT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 297 GFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQ 337
>ABX80503.1 RdRp, partial [Carnation etched ring virus]
Length = 393
Score = 127 bits (320), Expect = 3e-33
Identities = 58/101 (57%), Positives = 75/101 (74%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
SP F+ N AE +RGK RMVVNYK +N+ TK D + LP+K+ L+ + RGK IYS FDCKS
Sbjct: 229 SPAFLVENEAERRRGKKRMVVNYKAINKATKGDAHNLPNKDELLALVRGKKIYSSFDCKS 288
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S LT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 289 GFWQVLLDQESQLLTAFTCPQGHYQWNVVPFGLKQAPSIFQ 329
>ABX80504.1 RdRp, partial [Carnation etched ring virus]
Length = 394
Score = 127 bits (319), Expect = 4e-33
Identities = 58/101 (57%), Positives = 75/101 (74%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
SP F+ N AE +RGK RMVVNYK +N+ TK D + LP+K+ L+ + RGK IYS FDCKS
Sbjct: 230 SPAFLVENEAERRRGKKRMVVNYKAMNKATKGDAHNLPNKDELLALVRGKKIYSSFDCKS 289
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S LT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 290 GFWQVLLDKESQLLTAFTCPQGHYQWNVVPFGLKQAPSIFQ 330
>ABX80500.1 RdRp, partial [Cauliflower mosaic virus]
Length = 401
Score = 127 bits (319), Expect = 4e-33
Identities = 57/101 (56%), Positives = 74/101 (73%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
+P F+ N AE +RGK RMVVNYK +N+ T D Y LP K+ L+ + RGK I+S FDCKS
Sbjct: 237 APAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPSKDELLTLIRGKKIFSSFDCKS 296
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S PLT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 297 GFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQ 337
>YP_002519387.1 putative enzymatic polyprotein [Rudbeckia flower distortion virus]
ACL36982.1 putative enzymatic polyprotein [Rudbeckia
flower distortion virus]
Length = 701
Score = 130 bits (326), Expect = 5e-33
Identities = 59/102 (57%), Positives = 74/102 (72%)
Frame = +2
Query: 2 SSPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCK 181
SSP F+ +NH EIKRGK R+V+NYK LN T DGY LP+KET++ RG+ +S DCK
Sbjct: 308 SSPCFLVQNHNEIKRGKKRLVINYKALNAATISDGYLLPNKETILTAIRGRKYFSTLDCK 367
Query: 182 SGFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
SGF+QIRL+E S PLT FS P G Y+W V+PF LK P ++Q
Sbjct: 368 SGFWQIRLNENSKPLTAFSCPMGQYEWNVVPFGLKQAPGLFQ 409
>AHA91297.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 129 bits (323), Expect = 1e-32
Identities = 57/101 (56%), Positives = 75/101 (74%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
+P F+ N AE +RGK RMVVNYK +N+ T D Y LP+K+ L+ + RGK I+S FDCKS
Sbjct: 279 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLVRGKKIFSSFDCKS 338
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S PLT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 339 GFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQ 379
>AHA91290.1 reverse transcriptase [Cauliflower mosaic virus] AHA91304.1 reverse
transcriptase [Cauliflower mosaic virus] BAO53351.1
reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 129 bits (323), Expect = 1e-32
Identities = 57/101 (56%), Positives = 75/101 (74%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
+P F+ N AE +RGK RMVVNYK +N+ T D Y LP+K+ L+ + RGK I+S FDCKS
Sbjct: 279 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLVRGKKIFSSFDCKS 338
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S PLT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 339 GFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQ 379
>AGT42175.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 675
Score = 129 bits (323), Expect = 1e-32
Identities = 57/101 (56%), Positives = 75/101 (74%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
+P F+ N AE +RGK RMVVNYK +N+ T D Y LP+K+ L+ + RGK I+S FDCKS
Sbjct: 280 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLVRGKKIFSSFDCKS 339
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S PLT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 340 GFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQ 380
>BAO53526.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 671
Score = 128 bits (322), Expect = 2e-32
Identities = 57/101 (56%), Positives = 75/101 (74%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
+P F+ N AE +RGK RMVVNYK +N+ T D Y LP+K+ L+ + RGK I+S FDCKS
Sbjct: 276 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKS 335
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S PLT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 336 GFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQ 376
>AHA91342.1 reverse transcriptase [Cauliflower mosaic virus] AHA91352.1 reverse
transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 128 bits (322), Expect = 2e-32
Identities = 57/101 (56%), Positives = 75/101 (74%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
+P F+ N AE +RGK RMVVNYK +N+ T D Y LP+K+ L+ + RGK I+S FDCKS
Sbjct: 279 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKS 338
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S PLT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 339 GFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQ 379
>AHA91338.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 128 bits (322), Expect = 2e-32
Identities = 57/101 (56%), Positives = 75/101 (74%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
+P F+ N AE +RGK RMVVNYK +N+ T D Y LP+K+ L+ + RGK I+S FDCKS
Sbjct: 279 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKS 338
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S PLT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 339 GFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQ 379
>AHA91331.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 128 bits (322), Expect = 2e-32
Identities = 57/101 (56%), Positives = 75/101 (74%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
+P F+ N AE +RGK RMVVNYK +N+ T D Y LP+K+ L+ + RGK I+S FDCKS
Sbjct: 279 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKS 338
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S PLT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 339 GFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQ 379
>AHA91317.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 128 bits (322), Expect = 2e-32
Identities = 57/101 (56%), Positives = 75/101 (74%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
+P F+ N AE +RGK RMVVNYK +N+ T D Y LP+K+ L+ + RGK I+S FDCKS
Sbjct: 279 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKS 338
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S PLT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 339 GFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQ 379
>BAO53680.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 128 bits (322), Expect = 2e-32
Identities = 57/101 (56%), Positives = 75/101 (74%)
Frame = +2
Query: 5 SPTFMERNHAEIKRGKARMVVNYKQLNQHTKFDGYFLPHKETLINMTRGKNIYSKFDCKS 184
+P F+ N AE +RGK RMVVNYK +N+ T D Y LP+K+ L+ + RGK I+S FDCKS
Sbjct: 279 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKS 338
Query: 185 GFYQIRLDEKSIPLTTFSTPQGHYKWTVMPFRLKNVPQIYQ 307
GF+Q+ LD++S PLT F+ PQGHY+W V+PF LK P I+Q
Sbjct: 339 GFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQ 379