BLASTX nr result

ID: Alisma22_contig00033603 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00033603
         (257 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_020096408.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Ananas comos...    53   3e-06
KMZ70491.1 Ubiquitin carboxyl-terminal hydrolase family protein ...    53   4e-06

>XP_020096408.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Ananas comosus] XP_020096409.1
           protein ROOT PRIMORDIUM DEFECTIVE 1 [Ananas comosus]
           XP_020096411.1 protein ROOT PRIMORDIUM DEFECTIVE 1
           [Ananas comosus]
          Length = 392

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 24/45 (53%), Positives = 35/45 (77%)
 Frame = +2

Query: 119 FNSPLTSCSALRFLQRSTYVNVRMKWKKDPFYDTLDVVNRSKELR 253
           F+SP+ +  A   + RSTYV+V MKWKKDPFYD++ V+ RS++L+
Sbjct: 15  FSSPVRTL-AFSLVHRSTYVDVAMKWKKDPFYDSIGVLARSRDLK 58


>KMZ70491.1 Ubiquitin carboxyl-terminal hydrolase family protein [Zostera
           marina]
          Length = 413

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +2

Query: 170 TYVNVRMKWKKDPFYDTLDVVNRSKELR 253
           TYVNVR KWKKD FYDTL+VVN SKEL+
Sbjct: 28  TYVNVRTKWKKDTFYDTLEVVNESKELK 55


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