BLASTX nr result
ID: Alisma22_contig00033494
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00033494
(421 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU44619.1 hypothetical protein TSUD_378970 [Trifolium subterran... 70 3e-11
ABD28505.2 RNA-directed DNA polymerase (Reverse transcriptase); ... 70 3e-11
XP_016164673.1 PREDICTED: uncharacterized protein LOC107607211 [... 69 5e-11
GAU39340.1 hypothetical protein TSUD_60910 [Trifolium subterraneum] 68 1e-10
KYP37594.1 Putative ribonuclease H protein At1g65750 family, par... 56 1e-09
GAU10577.1 hypothetical protein TSUD_420970, partial [Trifolium ... 64 3e-09
GAU11804.1 hypothetical protein TSUD_75550 [Trifolium subterraneum] 64 4e-09
XP_016162229.1 PREDICTED: uncharacterized protein LOC107605009 [... 57 5e-09
KHN24231.1 Putative ribonuclease H protein [Glycine soja] 57 5e-09
XP_015935830.1 PREDICTED: uncharacterized protein LOC107461787 [... 63 7e-09
GAU36844.1 hypothetical protein TSUD_213680 [Trifolium subterran... 62 1e-08
EOY25817.1 Non-LTR retroelement reverse transcriptase [Theobroma... 62 2e-08
XP_016168765.1 PREDICTED: uncharacterized protein LOC107611342 [... 62 2e-08
KYP76185.1 Putative ribonuclease H protein At1g65750 [Cajanus ca... 56 5e-08
EOY25852.1 Non-LTR retroelement reverse transcriptase [Theobroma... 60 8e-08
EOY02864.1 Ribonuclease H protein [Theobroma cacao] 57 8e-08
KYP67585.1 Putative ribonuclease H protein At1g65750 family [Caj... 55 1e-07
AEL30350.1 RNA-directed DNA polymerase [Arachis hypogaea] 59 2e-07
XP_016171055.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 59 3e-07
XP_018815691.1 PREDICTED: uncharacterized protein LOC108987257 [... 52 3e-07
>GAU44619.1 hypothetical protein TSUD_378970 [Trifolium subterraneum]
Length = 440
Score = 69.7 bits (169), Expect = 3e-11
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = -3
Query: 416 TCPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSH--EH 243
TCP C + DET+IH LRDC ++W RL + FF T ++WI + +H E
Sbjct: 148 TCPACGNEDETIIHVLRDCMHATQIWIRLVTSNHITNFFSLT-CRDWIFYNMEGAHNKEW 206
Query: 242 QVTFFTTCRHLWQCRNKHIFNG--RTPPMPQQIL 147
Q F C HLW RNK IF R P P ++
Sbjct: 207 QTIFMVACWHLWTWRNKSIFEDDFRRPNNPTHVI 240
>ABD28505.2 RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 69.7 bits (169), Expect(2) = 3e-11
Identities = 37/84 (44%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = -3
Query: 416 TCPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCS----- 252
TCP C DET+IH LRDC +VW RL P + FF + +EW+ LN
Sbjct: 504 TCPCCAREDETVIHVLRDCVHSTQVWLRLIPHNYITNFFSFD-CREWVFNNLNKKGIGDN 562
Query: 251 -HEHQVTFFTTCRHLWQCRNKHIF 183
Q TF TTC +LW RNK IF
Sbjct: 563 PATWQTTFMTTCWYLWNWRNKSIF 586
Score = 25.4 bits (54), Expect(2) = 3e-11
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 127 STKWRLSTRRKKQKQQAQWEKPPPGVLKLNSDAAVK 20
+TK + +K+ W +PP G +KLN D A K
Sbjct: 610 NTKLVHKSSHQKETIYIGWMRPPFGWVKLNCDGAWK 645
>XP_016164673.1 PREDICTED: uncharacterized protein LOC107607211 [Arachis ipaensis]
Length = 1901
Score = 69.3 bits (168), Expect = 5e-11
Identities = 35/93 (37%), Positives = 46/93 (49%)
Frame = -3
Query: 416 TCPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSHEHQV 237
TCPRCRS +E+ IH LRDC +W RL P S FF+ T EW+ L +
Sbjct: 1615 TCPRCRSHEESTIHVLRDCPYAMSIWNRLIPPNGRSSFFN-TELNEWLYQNLTTNKNWNC 1673
Query: 236 TFFTTCRHLWQCRNKHIFNGRTPPMPQQILSIK 138
F +W RNK +FNG + + + IK
Sbjct: 1674 LFGVALSSIWYLRNKLVFNGESAHVNTAVNQIK 1706
>GAU39340.1 hypothetical protein TSUD_60910 [Trifolium subterraneum]
Length = 1084
Score = 68.2 bits (165), Expect = 1e-10
Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Frame = -3
Query: 416 TCPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSH--EH 243
TCP C + DET+IH LRDC +++W L + FF + EWI + +H E
Sbjct: 826 TCPICGNADETIIHVLRDCSYANQLWIELAASNHITNFFSLS-CMEWIFDNMEKAHDREW 884
Query: 242 QVTFFTTCRHLWQCRNKHIF--NGRTPPMPQQ-ILSIKRDV 129
+ F TC HLW RNK IF + R P P IL + R+V
Sbjct: 885 KTIFMITCWHLWMWRNKSIFEEDFRRPNNPTHVILKMSREV 925
>KYP37594.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 522
Score = 55.8 bits (133), Expect(2) = 1e-09
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = -3
Query: 413 CPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWI-SGQLNCSHEHQV 237
CP C E ++H LRDC V +W+RL + +D+ F+H T +W+ S +N
Sbjct: 238 CPICNIDQENIVHILRDCYCVVAIWQRLFGD-LDNDFYHPT-VTQWLGSNLINVEESWAT 295
Query: 236 TFFTTCRHLWQCRNKHIFNGRTPPMPQQIL 147
TF +W+ RN +FN + P P QI+
Sbjct: 296 TFAVAIDSIWKARNMTVFN-QLPFNPNQIV 324
Score = 33.9 bits (76), Expect(2) = 1e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 73 WEKPPPGVLKLNSDAAV 23
W +PPPGVLKLN D AV
Sbjct: 356 WSRPPPGVLKLNCDGAV 372
>GAU10577.1 hypothetical protein TSUD_420970, partial [Trifolium subterraneum]
Length = 426
Score = 63.9 bits (154), Expect = 3e-09
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = -3
Query: 413 CPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSH----- 249
C C +GDET+IH LRDC +W RL + FF ++WI LN
Sbjct: 291 CSSCGNGDETIIHTLRDCAHATRIWLRLVCHNQITNFFSSLNCRDWIFMNLNSKEFGVQQ 350
Query: 248 -EHQVTFFTTCRHLWQCRNKHIFNG--RTPPMPQQIL 147
Q F C H+W RNK IF + P P Q++
Sbjct: 351 GNWQSIFMVACWHIWTWRNKSIFEEGFQRPNDPSQVI 387
>GAU11804.1 hypothetical protein TSUD_75550 [Trifolium subterraneum]
Length = 1178
Score = 63.9 bits (154), Expect = 4e-09
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = -3
Query: 413 CPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSH----- 249
C C +GDET+IH LRDC +W RL + FF ++WI LN
Sbjct: 999 CSSCGNGDETIIHTLRDCAHATRIWLRLVCHNQITNFFSSLNCRDWIFMNLNSKEFGVQQ 1058
Query: 248 -EHQVTFFTTCRHLWQCRNKHIFNG--RTPPMPQQIL 147
Q F C H+W RNK IF + P P Q++
Sbjct: 1059 GNWQSIFMVACWHIWTWRNKSIFEEGFQRPNDPSQVI 1095
>XP_016162229.1 PREDICTED: uncharacterized protein LOC107605009 [Arachis ipaensis]
Length = 1371
Score = 56.6 bits (135), Expect(2) = 5e-09
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Frame = -3
Query: 413 CPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEW----ISGQLNCSHE 246
C RC ET +HALRDC +W L +VFF A EW +S Q+ S
Sbjct: 1077 CHRCHRILETGLHALRDCPYAASIWVELVQPSAIAVFFGMNLA-EWLDFNLSNQIGKSSN 1135
Query: 245 HQ--VTFFTTCRHLWQCRNKHIFNGRTPPMPQQILSIKRD-VKYQMEAFNKE 99
H FF C +W+ RN+ +F+ + P+ ++I RD V EA K+
Sbjct: 1136 HNWIDEFFVACWRIWKWRNQDLFSQQQATRPRNAVTIIRDSVSNYKEAVKKK 1187
Score = 31.2 bits (69), Expect(2) = 5e-09
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 91 QKQQAQWEKPPPGVLKLNSDAAVKK 17
Q ++ WE PP G +KLN+D +VK+
Sbjct: 1197 QNRRQAWEPPPRGWVKLNTDGSVKE 1221
>KHN24231.1 Putative ribonuclease H protein [Glycine soja]
Length = 317
Score = 57.4 bits (137), Expect(2) = 5e-09
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = -3
Query: 413 CPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQL----NCSHE 246
CPRC E+++H LRDC +VW L ++ +F + +W+ L NC
Sbjct: 174 CPRCHLQPESILHCLRDCFYAKQVWNTLSGNSLNHLFCAHD-CPQWLVSNLRSPQNCEEN 232
Query: 245 HQVTFFT-TCRHLWQCRNKHIFNGRTPPMPQQILSIKR 135
+ FF T +W+ RN+ IF+ RT + + I R
Sbjct: 233 NWALFFVITISFIWKARNEMIFSNRTQSASELVGHIPR 270
Score = 30.4 bits (67), Expect(2) = 5e-09
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 88 KQQAQWEKPPPGVLKLNSDAAV 23
+ + W PPPG KLN DAAV
Sbjct: 282 ENKIHWHLPPPGKFKLNCDAAV 303
>XP_015935830.1 PREDICTED: uncharacterized protein LOC107461787 [Arachis duranensis]
Length = 1370
Score = 63.2 bits (152), Expect = 7e-09
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = -3
Query: 416 TCPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSHEHQV 237
+CPRCR +E+ IH LRDC +WR+L P + FF+ T EW+ L +++
Sbjct: 991 SCPRCRCHEESTIHVLRDCFYAKSIWRKLFPPIGINSFFN-TDLNEWLLQNLKSNNKWSC 1049
Query: 236 TFFTTCRHLWQCRNKHIFNGRT 171
F +W RNK +FNG +
Sbjct: 1050 LFGVAVSTMWYLRNKLVFNGES 1071
>GAU36844.1 hypothetical protein TSUD_213680 [Trifolium subterraneum]
Length = 1025
Score = 62.4 bits (150), Expect = 1e-08
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Frame = -3
Query: 416 TCPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSH---- 249
TC C + DET+IH LRDC +W RL + FF +EWI LN +
Sbjct: 728 TCSICGNDDETMIHTLRDCIYATGIWLRLVSSNQITNFFSSFDCREWIFLNLNTKNFGNQ 787
Query: 248 --EHQVTFFTTCRHLWQCRNKHIF--NGRTPPMPQQ-ILSIKRDVKY 123
+ F C H+W RNK IF + + P P Q IL + +D+K+
Sbjct: 788 QESWKSIFMVVCWHIWTWRNKAIFEEDFQRPNDPSQVILRMTKDIKH 834
>EOY25817.1 Non-LTR retroelement reverse transcriptase [Theobroma cacao]
Length = 874
Score = 62.0 bits (149), Expect = 2e-08
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = -3
Query: 416 TCPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSHEH-- 243
+CP C +ET +H LRDC + +WRR+ PE + FF +W+S LN + +
Sbjct: 625 SCPHCYGVEETCLHVLRDCLASETLWRRILPESGINQFFQIPLI-DWLSSNLNLKNLYVF 683
Query: 242 ----QVTFFTTCRHLWQCRNKHIFNGR 174
+ F TTC + W+ N IF GR
Sbjct: 684 DVPWNIVFGTTCWYTWKRSNLFIFEGR 710
>XP_016168765.1 PREDICTED: uncharacterized protein LOC107611342 [Arachis ipaensis]
Length = 917
Score = 62.0 bits (149), Expect = 2e-08
Identities = 39/122 (31%), Positives = 54/122 (44%)
Frame = -3
Query: 413 CPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSHEHQVT 234
CPRC +E +IH LRDC +W+RL P + FF+ T W+S L ++
Sbjct: 762 CPRCWHHEELVIHVLRDCFYARSIWQRLIPPNGINSFFN-TSLNNWLSLNLTSNNNWSCL 820
Query: 233 FFTTCRHLWQCRNKHIFNGRTPPMPQQILSIKRDVKYQMEAFNKEEEAETASTMGKTSTR 54
F LW RNK +FNG T V YQ+ A +E S + +TR
Sbjct: 821 FGVAASSLWFFRNKLVFNGET--------VAATTVGYQIRARAEEFLKVVKSNLNPRNTR 872
Query: 53 GS 48
+
Sbjct: 873 AA 874
>KYP76185.1 Putative ribonuclease H protein At1g65750 [Cajanus cajan]
Length = 1354
Score = 55.8 bits (133), Expect(2) = 5e-08
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -3
Query: 413 CPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSHEHQV- 237
CPRC ET +H LRDC EVWR + E +D FF+ ++ W+ L+ S + +
Sbjct: 1087 CPRCHMDRETTLHVLRDCTFAREVWRGIMGEDVDQNFFN-SQLTIWLESNLDTSAPNWIH 1145
Query: 236 TFFTTCRHLWQCRNKHIF 183
F T LW+ RN F
Sbjct: 1146 EFALTLDSLWKNRNNFTF 1163
Score = 28.5 bits (62), Expect(2) = 5e-08
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -1
Query: 133 MSST---KWRLSTRRKKQKQQAQWEKPPPGVLKLNSDAAV 23
+SST K R ++ +K +W PP LKLN D AV
Sbjct: 1184 LSSTTFCKPRTLYQKDNRKSHIRWTPPPSNSLKLNCDGAV 1223
>EOY25852.1 Non-LTR retroelement reverse transcriptase [Theobroma cacao]
Length = 1011
Score = 60.1 bits (144), Expect = 8e-08
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = -3
Query: 416 TCPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSHEH-- 243
+CP C +ET +H LRDC ++ +WRR+ P+ + FF +W+S LN + +
Sbjct: 753 SCPHCYGVEETCLHVLRDCPALETLWRRILPQSGINQFFQIPLI-DWLSSNLNLKNLYVF 811
Query: 242 ----QVTFFTTCRHLWQCRNKHIFNGR 174
+ TC + W+ RN IF GR
Sbjct: 812 DVPWNIVLGITCWYTWKWRNLFIFEGR 838
>EOY02864.1 Ribonuclease H protein [Theobroma cacao]
Length = 660
Score = 57.0 bits (136), Expect(2) = 8e-08
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = -3
Query: 413 CPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWI-----SGQLNCSH 249
CP+CR DET+ H LRDC +W ++ P+ + FF + +EW+ QL +
Sbjct: 366 CPQCRMEDETVTHVLRDCMVATSLWVKIIPQHEQNDFFTFP-LREWLVSNLQKQQLILGN 424
Query: 248 EHQVTFFTTCRHLWQCRNKHIFNGRTPPMPQQILSIK 138
V F C LW+ RN +F P ++I IK
Sbjct: 425 PWSVVFGLACWCLWKWRNGVVFYAAFNPTRKRISMIK 461
Score = 26.6 bits (57), Expect(2) = 8e-08
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 103 RRKKQKQQAQWEKPPPGVLKLNSDAAVKK 17
RRKK++ W P G + LN+D A K+
Sbjct: 481 RRKKEEVLIGWRTPQVGWVCLNTDEAYKR 509
>KYP67585.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 363
Score = 55.1 bits (131), Expect(2) = 1e-07
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = -3
Query: 413 CPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSHEH-QV 237
CP+C ET +HALRDC V VW L I F + + WI L C +E+ ++
Sbjct: 27 CPKCHQEPETGLHALRDCVVVKNVWSHLVNGGIPPNFIN-SNLGTWIVSNLTCRNENWRL 85
Query: 236 TFFTTCRHLWQCRNKHIFNGRTPPMPQQILSIKR 135
F T LW+ RN IF+ ++SIKR
Sbjct: 86 IFAVTIDKLWKARNALIFDQHHVNPYCLVVSIKR 119
Score = 27.7 bits (60), Expect(2) = 1e-07
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 76 QWEKPPPGVLKLNSDAAVK 20
+W+ PP G +KLN D AV+
Sbjct: 149 RWQPPPLGSIKLNCDGAVR 167
>AEL30350.1 RNA-directed DNA polymerase [Arachis hypogaea]
Length = 673
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/91 (34%), Positives = 45/91 (49%)
Frame = -3
Query: 413 CPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSHEHQVT 234
CPRC S E++IH +RDC + VW+RL + H K W L S EH
Sbjct: 407 CPRCLSSQESVIHCIRDCPKAQLVWQRL------DIPCHPLDLKNWF---LYHSREHPFK 457
Query: 233 FFTTCRHLWQCRNKHIFNGRTPPMPQQILSI 141
FF+ +W+ RN IFN P++++ +
Sbjct: 458 FFSGLWWIWRARNNDIFNPHETWPPEKVICL 488
>XP_016171055.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107613525
[Arachis ipaensis]
Length = 2052
Score = 58.5 bits (140), Expect = 3e-07
Identities = 30/91 (32%), Positives = 44/91 (48%)
Frame = -3
Query: 413 CPRCRSGDETLIHALRDCRQVDEVWRRLQPEKIDSVFFHYTRAKEWISGQLNCSHEHQVT 234
CPRC S E+++H +RDC + VW RL + H K W L S EH
Sbjct: 1362 CPRCLSSQESVLHCIRDCPKAQLVWHRL------DISCHPLDLKNWF---LYHSREHPFK 1412
Query: 233 FFTTCRHLWQCRNKHIFNGRTPPMPQQILSI 141
FF+ +W+ RN IFN P++++ +
Sbjct: 1413 FFSGLWWIWRARNNDIFNPHETWPPEKVICL 1443
>XP_018815691.1 PREDICTED: uncharacterized protein LOC108987257 [Juglans regia]
Length = 274
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 5/120 (4%)
Frame = -3
Query: 413 CPRCRSGDETLIHALRDCRQVDEVW----RRLQPEKIDSVFFHYTRAKEWISGQLN-CSH 249
CP C ET+ H L +C +VW RR+Q K + FH + +S L+
Sbjct: 2 CPICLIHPETVSHVLWECIAAQDVWSHSSRRIQKSKTEVASFH-----DLLSNLLSTLPP 56
Query: 248 EHQVTFFTTCRHLWQCRNKHIFNGRTPPMPQQILSIKRDVKYQMEAFNKEEEAETASTMG 69
E T + +W RNK +F R P PQQIL + D ++E + + + G
Sbjct: 57 EDHTRLAFTAKEIWFRRNKFVFESRFTP-PQQILKLVSDSMSELEQTERNQHRTSTQIQG 115
Score = 29.3 bits (64), Expect(2) = 3e-07
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -1
Query: 79 AQWEKPPPGVLKLNSDAAVKK 17
A+W KPP V KLN DAA+ K
Sbjct: 117 ARWCKPPINVYKLNWDAAIAK 137