BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00033120
         (767 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMZ73660.1 RNA pseudouridine synthase 3, mitochondrial [Zostera ...    88   4e-16
XP_010927194.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...    76   4e-12
XP_009401551.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...    75   7e-12
XP_008807168.2 PREDICTED: LOW QUALITY PROTEIN: RNA pseudouridine...    74   1e-11
XP_020110891.1 RNA pseudouridine synthase 3, mitochondrial isofo...    67   3e-09
XP_020110890.1 RNA pseudouridine synthase 3, mitochondrial isofo...    67   3e-09
XP_020110889.1 RNA pseudouridine synthase 3, mitochondrial isofo...    67   3e-09
XP_012068449.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...    66   7e-09
XP_012068447.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...    66   7e-09
XP_007023655.2 PREDICTED: RNA pseudouridine synthase 3, mitochon...    66   1e-08
EOY26277.1 Pseudouridine synthase family protein [Theobroma cacao]     66   1e-08
OAY64420.1 RNA pseudouridine synthase 3, mitochondrial [Ananas c...    66   1e-08
KJB56430.1 hypothetical protein B456_009G119600 [Gossypium raimo...    62   9e-08
KJB56433.1 hypothetical protein B456_009G119600 [Gossypium raimo...    62   1e-07
KJB56432.1 hypothetical protein B456_009G119600 [Gossypium raimo...    62   2e-07
KJB56431.1 hypothetical protein B456_009G119600 [Gossypium raimo...    62   2e-07
KVH97123.1 hypothetical protein Ccrd_000779 [Cynara cardunculus ...    58   2e-07
XP_012092035.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...    62   2e-07
XP_012444478.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...    62   2e-07
EYU23584.1 hypothetical protein MIMGU_mgv1a026780mg, partial [Er...    62   3e-07

>KMZ73660.1 RNA pseudouridine synthase 3, mitochondrial [Zostera marina]
          Length = 532

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = +2

Query: 479 SNNVAYLGSXXXXXXXXXXXXXXXXXXXX-TASKPLPGRKRPPRAPLGKSARITAVTWLK 655
           S NVAYLG                      ++SKPLPGRK+PP +P GK  R+TA+TWLK
Sbjct: 86  SKNVAYLGKPKEGPKPRQLLQLPPFSLCLASSSKPLPGRKKPPGSPPGKPPRVTAITWLK 145

Query: 656 YYFADVLPSIIQGHFNKGQVLMEWS 730
           +YFADVLPS+IQ HFN+G V ME S
Sbjct: 146 HYFADVLPSVIQDHFNRGLVRMECS 170


>XP_010927194.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Elaeis
           guineensis]
          Length = 483

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 42/88 (47%), Positives = 49/88 (55%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           VIR+SNNVA LG                     T   PLPGRKR P A   K  RITA+T
Sbjct: 34  VIRVSNNVARLGEPKEGPKPRQLLSLPPFPSSHT--NPLPGRKRDPAADPSKPRRITAIT 91

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLMEWS 730
           W+K+YFAD+ P +IQ HF KG V +E S
Sbjct: 92  WVKHYFADIPPEVIQSHFRKGLVHVESS 119


>XP_009401551.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Musa
           acuminata subsp. malaccensis]
          Length = 481

 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           VIR+SNNVA LG                     T + PLPGRK+ P A  G+  R+TA++
Sbjct: 34  VIRVSNNVARLGKPKEGPKPRQLLSLPPFPS--TGTDPLPGRKKDPAAS-GQPRRVTAIS 90

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLMEWSINN-TVERNVLM 763
           W+K+YFAD+ P +IQ HFNKG V +E S ++   E N LM
Sbjct: 91  WVKHYFADIPPEVIQSHFNKGLVHVESSNHDFQTEENYLM 130


>XP_008807168.2 PREDICTED: LOW QUALITY PROTEIN: RNA pseudouridine synthase 3,
           mitochondrial [Phoenix dactylifera]
          Length = 482

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 41/88 (46%), Positives = 49/88 (55%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           VIR+SNNVA LG                       + PLPGRKR P A   K  RITA+T
Sbjct: 34  VIRVSNNVARLGEPKEGPKPRQLLSLPPSPPL---TNPLPGRKRDPAADPSKPRRITAIT 90

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLMEWS 730
           W+K+YFAD+ P +IQ HF KG V +E S
Sbjct: 91  WVKHYFADIPPEVIQSHFRKGLVHVESS 118


>XP_020110891.1 RNA pseudouridine synthase 3, mitochondrial isoform X3 [Ananas
           comosus]
          Length = 485

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTAS----KPLPGRKRPPRAPLGKSARI 634
           VIR+SNNVA LG                     ++S     PLPGRKR P  P     R+
Sbjct: 34  VIRVSNNVARLGEAKEGPKPRQLLSLPRFPSSSSSSCDRGDPLPGRKRDPSKP----RRV 89

Query: 635 TAVTWLKYYFADVLPSIIQGHFNKGQVLMEWSINN 739
           TA++W+K+YFAD+   +IQ HFNKG V +E   N+
Sbjct: 90  TAISWVKHYFADIPQEVIQAHFNKGLVHVECPNND 124


>XP_020110890.1 RNA pseudouridine synthase 3, mitochondrial isoform X2 [Ananas
           comosus]
          Length = 511

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTAS----KPLPGRKRPPRAPLGKSARI 634
           VIR+SNNVA LG                     ++S     PLPGRKR P  P     R+
Sbjct: 34  VIRVSNNVARLGEAKEGPKPRQLLSLPRFPSSSSSSCDRGDPLPGRKRDPSKP----RRV 89

Query: 635 TAVTWLKYYFADVLPSIIQGHFNKGQVLMEWSINN 739
           TA++W+K+YFAD+   +IQ HFNKG V +E   N+
Sbjct: 90  TAISWVKHYFADIPQEVIQAHFNKGLVHVECPNND 124


>XP_020110889.1 RNA pseudouridine synthase 3, mitochondrial isoform X1 [Ananas
           comosus]
          Length = 518

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTAS----KPLPGRKRPPRAPLGKSARI 634
           VIR+SNNVA LG                     ++S     PLPGRKR P  P     R+
Sbjct: 34  VIRVSNNVARLGEAKEGPKPRQLLSLPRFPSSSSSSCDRGDPLPGRKRDPSKP----RRV 89

Query: 635 TAVTWLKYYFADVLPSIIQGHFNKGQVLMEWSINN 739
           TA++W+K+YFAD+   +IQ HFNKG V +E   N+
Sbjct: 90  TAISWVKHYFADIPQEVIQAHFNKGLVHVECPNND 124


>XP_012068449.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X2 [Jatropha curcas] KDP41142.1 hypothetical protein
           JCGZ_03633 [Jatropha curcas]
          Length = 463

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 36/89 (40%), Positives = 50/89 (56%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           +IR+SNNVAYLGS                     +  P PG   P +    +++R+TA++
Sbjct: 31  IIRVSNNVAYLGSPKDGPKPRQLL----------SLPPFPGLPLPGKT--SEASRVTAIS 78

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLMEWSI 733
           W+KYYF ++L S+IQ HFNKG V ME  I
Sbjct: 79  WVKYYFDEILDSVIQSHFNKGLVQMECPI 107


>XP_012068447.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Jatropha curcas] XP_012068448.1 PREDICTED: RNA
           pseudouridine synthase 3, mitochondrial-like isoform X1
           [Jatropha curcas]
          Length = 472

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 36/89 (40%), Positives = 50/89 (56%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           +IR+SNNVAYLGS                     +  P PG   P +    +++R+TA++
Sbjct: 31  IIRVSNNVAYLGSPKDGPKPRQLL----------SLPPFPGLPLPGKT--SEASRVTAIS 78

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLMEWSI 733
           W+KYYF ++L S+IQ HFNKG V ME  I
Sbjct: 79  WVKYYFDEILDSVIQSHFNKGLVQMECPI 107


>XP_007023655.2 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Theobroma
           cacao]
          Length = 471

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           V+R+SN+VAYLG+                     +  P PG   P + P G +AR+TA++
Sbjct: 31  VLRVSNSVAYLGAPKQGPKPRQLL----------SLPPFPGYPLPGKNP-GGTARVTAIS 79

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLMEWSI--NNTVERNVLM 763
           WLKYYF ++  S IQ HFNKG V ME S   +  +ER+ LM
Sbjct: 80  WLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIERDGLM 120


>EOY26277.1 Pseudouridine synthase family protein [Theobroma cacao]
          Length = 471

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           V+R+SN+VAYLG+                     +  P PG   P + P G +AR+TA++
Sbjct: 31  VLRVSNSVAYLGAPKQGPKPRQLL----------SLPPFPGYPLPGKNP-GGTARVTAIS 79

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLMEWSI--NNTVERNVLM 763
           WLKYYF ++  S IQ HFNKG V ME S   +  +ER+ LM
Sbjct: 80  WLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIERDGLM 120


>OAY64420.1 RNA pseudouridine synthase 3, mitochondrial [Ananas comosus]
          Length = 503

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTAS----KPLPGRKRPPRAPLGKSARI 634
           VIR+SNNVA LG                     ++S     PLPGRKR P  P     R+
Sbjct: 34  VIRVSNNVARLGEAKEGPKPRQLLSLPRFPSSSSSSCDRGDPLPGRKRDPSKP----RRV 89

Query: 635 TAVTWLKYYFADVLPSIIQGHFNKGQV 715
           TA++W+K+YFAD+   +IQ HFNKG V
Sbjct: 90  TAISWVKHYFADIPQEVIQAHFNKGLV 116


>KJB56430.1 hypothetical protein B456_009G119600 [Gossypium raimondii]
          Length = 265

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 37/94 (39%), Positives = 48/94 (51%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           VIR+SNNVAYLGS                     +  P PG   P +     + R+TA++
Sbjct: 31  VIRVSNNVAYLGSPKQGPKPRQLL----------SLPPFPGHHLPGKN--SATGRVTAIS 78

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLMEWSINNTVE 748
           WLKYYF ++  S IQ HFNKG V +E S  N  +
Sbjct: 79  WLKYYFDEISDSAIQSHFNKGLVEIESSNPNAAD 112


>KJB56433.1 hypothetical protein B456_009G119600 [Gossypium raimondii]
          Length = 307

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 37/94 (39%), Positives = 48/94 (51%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           VIR+SNNVAYLGS                     +  P PG   P +     + R+TA++
Sbjct: 31  VIRVSNNVAYLGSPKQGPKPRQLL----------SLPPFPGHHLPGKN--SATGRVTAIS 78

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLMEWSINNTVE 748
           WLKYYF ++  S IQ HFNKG V +E S  N  +
Sbjct: 79  WLKYYFDEISDSAIQSHFNKGLVEIESSNPNAAD 112


>KJB56432.1 hypothetical protein B456_009G119600 [Gossypium raimondii]
          Length = 350

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 37/94 (39%), Positives = 48/94 (51%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           VIR+SNNVAYLGS                     +  P PG   P +     + R+TA++
Sbjct: 31  VIRVSNNVAYLGSPKQGPKPRQLL----------SLPPFPGHHLPGKN--SATGRVTAIS 78

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLMEWSINNTVE 748
           WLKYYF ++  S IQ HFNKG V +E S  N  +
Sbjct: 79  WLKYYFDEISDSAIQSHFNKGLVEIESSNPNAAD 112


>KJB56431.1 hypothetical protein B456_009G119600 [Gossypium raimondii]
          Length = 370

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 37/94 (39%), Positives = 48/94 (51%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           VIR+SNNVAYLGS                     +  P PG   P +     + R+TA++
Sbjct: 31  VIRVSNNVAYLGSPKQGPKPRQLL----------SLPPFPGHHLPGKN--SATGRVTAIS 78

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLMEWSINNTVE 748
           WLKYYF ++  S IQ HFNKG V +E S  N  +
Sbjct: 79  WLKYYFDEISDSAIQSHFNKGLVEIESSNPNAAD 112


>KVH97123.1 hypothetical protein Ccrd_000779 [Cynara cardunculus var. scolymus]
          Length = 108

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 33/83 (39%), Positives = 42/83 (50%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           VIR+SNN+ +LG                       S PLPG+   P       +  TA++
Sbjct: 32  VIRVSNNITHLGRPKAGYKPRQLLSLPPFP-----SHPLPGKNVSP------DSHTTAIS 80

Query: 647 WLKYYFADVLPSIIQGHFNKGQV 715
           W+KYYFADV  S+IQ HFNKG V
Sbjct: 81  WMKYYFADVAGSVIQSHFNKGLV 103


>XP_012092035.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like
           [Jatropha curcas] KDP21299.1 hypothetical protein
           JCGZ_21770 [Jatropha curcas]
          Length = 462

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 34/86 (39%), Positives = 48/86 (55%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           VIR+SNNVAYLGS                     +  P PG   P +  +  ++R+TA++
Sbjct: 31  VIRVSNNVAYLGSPKDGPKPRQLL----------SLPPFPGLPLPGKTSV--ASRVTAIS 78

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLME 724
           W+KYYF ++  S+IQ HFN+G V ME
Sbjct: 79  WVKYYFDEIPDSVIQSHFNRGLVQME 104


>XP_012444478.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Gossypium
           raimondii] XP_012444479.1 PREDICTED: RNA pseudouridine
           synthase 3, mitochondrial [Gossypium raimondii]
           KJB56428.1 hypothetical protein B456_009G119600
           [Gossypium raimondii]
          Length = 472

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 37/94 (39%), Positives = 48/94 (51%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           VIR+SNNVAYLGS                     +  P PG   P +     + R+TA++
Sbjct: 31  VIRVSNNVAYLGSPKQGPKPRQLL----------SLPPFPGHHLPGKN--SATGRVTAIS 78

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLMEWSINNTVE 748
           WLKYYF ++  S IQ HFNKG V +E S  N  +
Sbjct: 79  WLKYYFDEISDSAIQSHFNKGLVEIESSNPNAAD 112


>EYU23584.1 hypothetical protein MIMGU_mgv1a026780mg, partial [Erythranthe
           guttata]
          Length = 452

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 34/86 (39%), Positives = 45/86 (52%)
 Frame = +2

Query: 467 VIRISNNVAYLGSXXXXXXXXXXXXXXXXXXXXTASKPLPGRKRPPRAPLGKSARITAVT 646
           V+R+SNN+A+LG+                     +  P PG   P R        +TA++
Sbjct: 14  VLRVSNNIAHLGAPKEGPKPKQLL----------SLPPFPGNPLPGRHSTSVE-HVTAIS 62

Query: 647 WLKYYFADVLPSIIQGHFNKGQVLME 724
           WLKYYF DV+P +IQ HFNKG V ME
Sbjct: 63  WLKYYFDDVIPPVIQHHFNKGLVRME 88