BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00033098
         (1036 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP42143.1 Copia protein, partial [Cajanus cajan]                      56   1e-06
KYP34351.1 Retrovirus-related Pol polyprotein from transposon TN...    55   4e-06
KYP58618.1 Retrovirus-related Pol polyprotein from transposon TN...    58   9e-06

>KYP42143.1 Copia protein, partial [Cajanus cajan]
          Length = 87

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 34/92 (36%), Positives = 48/92 (52%)
 Frame = -1

Query: 334 DNQASYRHSF*SYFCKHTKHIEVDLHFVSHLVKAKRIANLPCHM*RPVIKLLTSYNTLTK 155
           DNQ++ +      F + TKHIE+D H V   V +  I  L       V   L   +  TK
Sbjct: 2   DNQSALQIETNQVFHERTKHIEIDCHIVREKVNSGLIKLLS------VPSSLQLADIFTK 55

Query: 154 LLSPAIFQYMTHKLGLHHVYSNLKGSLNFSYC 59
            LSP +FQ    KLG+ ++YS L+G LN ++C
Sbjct: 56  TLSPTLFQSFHTKLGMLNIYSQLEGGLNNNFC 87


>KYP34351.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 100

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 32/96 (33%), Positives = 51/96 (53%)
 Frame = -1

Query: 343 LLGDNQASYRHSF*SYFCKHTKHIEVDLHFVSHLVKAKRIANLPCHM*RPVIKLLTSYNT 164
           L  DNQ++ + +    F + TKHI++D H V     A  I  LP      ++      + 
Sbjct: 2   LFCDNQSALQIASNQVFHERTKHIDIDCHLVREKAAAGVIKILPVSSSSHIV------DV 55

Query: 163 LTKLLSPAIFQYMTHKLGLHHVYSNLKGSLNFSYCI 56
            TK LSPA+F+    KLG+++++S LKG LN  + +
Sbjct: 56  FTKALSPALFEENCSKLGMYNIHSQLKGVLNSPFSV 91


>KYP58618.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 459

 Score = 58.2 bits (139), Expect = 9e-06
 Identities = 39/114 (34%), Positives = 60/114 (52%)
 Frame = -1

Query: 394 TFLLQSTVVPIHSFRVSLLGDNQASYRHSF*SYFCKHTKHIEVDLHFVSHLVKAKRIANL 215
           T+LLQ   VP     + L  DNQ++ + +    F + TKHIE+D H V   V    +  L
Sbjct: 346 TYLLQDIHVPFVQPAI-LYCDNQSAIQIASNQVFHERTKHIEIDCHIVREKVNNGLLKIL 404

Query: 214 PCHM*RPVIKLLTSYNTLTKLLSPAIFQYMTHKLGLHHVYSNLKGSLNFSYCIL 53
           P      +   +   +  TK LSP+IFQ    KLG+ +++S L+G+LN +  I+
Sbjct: 405 P------ISSSMQLADIFTKALSPSIFQGFCSKLGMMNIHSQLEGALNSNKLII 452