BLASTX nr result

ID: Alisma22_contig00032358 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00032358
         (414 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010941832.1 PREDICTED: pentatricopeptide repeat-containing pr...   120   4e-29
XP_010242518.1 PREDICTED: pentatricopeptide repeat-containing pr...    88   1e-17

>XP_010941832.1 PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Elaeis guineensis]
          Length = 593

 Score =  120 bits (301), Expect = 4e-29
 Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
 Frame = +3

Query: 6   SPESISSANAATLVSAADNPLLAFDFYRFLRA-SASFRPEPDIFVALLRCQLLSISPVVF 182
           SP +IS++ AATLVSAA +PLLAFDFYRFLR+    F P+  +  ALLR QL S SP  F
Sbjct: 78  SPTTISASAAATLVSAAADPLLAFDFYRFLRSLRPHFHPDSSLLSALLRTQLRSRSPHPF 137

Query: 183 RIRYYLEEMRKRGLRISPADLRVLVGPLLPAKTSLVRQFVEEVDDVFGLDARLLTELVAL 362
           RIR+YL EMRK  + +SPAD R L   L P +  L R  ++++ +V G  + + +  +A+
Sbjct: 138 RIRFYLGEMRKHCVALSPADFRSLFTGLFPERCDLARSLLDQLIEVLGPSSEIYSIAIAI 197

Query: 363 YGENGLVEEVTAVAEKA 413
             ENGL++E   V+E+A
Sbjct: 198 LTENGLIDEAIKVSERA 214


>XP_010242518.1 PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Nelumbo nucifera]
          Length = 609

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 48/137 (35%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
 Frame = +3

Query: 6   SPESISSANAATLVSAADNPLLAFDFYRFLRA-SASFRPEPDIFVALLRCQLLSISPVVF 182
           SP +IS++ A+TL+S+  NPL++FDFYRFLR+    F+P+  +F +L++ QL S++P + 
Sbjct: 92  SPVTISTSQASTLISSISNPLISFDFYRFLRSLKPVFQPDSILFSSLIKSQLQSVNPHLP 151

Query: 183 RIRYYLEEMRKRGLRISPADLRVLVGPLLPAKTSLVRQFVEEVDDVFGLDARLLTELVAL 362
           +I +Y  EM+K  + +S  D   L   ++P    +   FV E+ +    D       +++
Sbjct: 152 KILFYFGEMKKHKVSLSHDDFCCLFCLVVPGYVDIADFFVRELLEKAEFDECAYNYAMSI 211

Query: 363 YGENGLVEEVTAVAEKA 413
           Y ++GL +E   VAE+A
Sbjct: 212 YAKHGLYKEAILVAERA 228


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