BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00031839
         (278 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAU10655.1 polyprotein [Oryza sativa Japonica Group]                   54   2e-06
ABA98004.1 retrotransposon protein, putative, Ty1-copia subclass...    53   4e-06
EEC68906.1 hypothetical protein OsI_37574 [Oryza sativa Indica G...    52   1e-05

>AAU10655.1 polyprotein [Oryza sativa Japonica Group]
          Length = 1286

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 27/66 (40%), Positives = 40/66 (60%)
 Frame = -2

Query: 274 VDTMANVHIFADKYLFIS*QVVNDKSMTLRVNSITTIKGEACVDMKLTSRNVLTLYRMRH 95
           VDT AN+H+FAD  LF S QV    S+ +   S+  + G   VD+K TS  ++ L  ++H
Sbjct: 411 VDTGANIHVFADISLFSSYQVGRGSSLLMGNGSLVAVHGVGTVDLKFTSGKIVQLKNVQH 470

Query: 94  VPMIRQ 77
           VP I++
Sbjct: 471 VPSIKK 476


>ABA98004.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 811

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 26/66 (39%), Positives = 40/66 (60%)
 Frame = -2

Query: 274 VDTMANVHIFADKYLFIS*QVVNDKSMTLRVNSITTIKGEACVDMKLTSRNVLTLYRMRH 95
           VDT AN+H+ AD  +F S QV  D S+ +   S+  + G   VD+K TS   + L  ++H
Sbjct: 202 VDTGANIHVCADISMFSSYQVGRDSSLLMGNGSLAVVHGVGMVDLKFTSGKTVQLKNVQH 261

Query: 94  VPMIRQ 77
           VP+I++
Sbjct: 262 VPLIKK 267


>EEC68906.1 hypothetical protein OsI_37574 [Oryza sativa Indica Group]
          Length = 342

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 26/66 (39%), Positives = 39/66 (59%)
 Frame = -2

Query: 274 VDTMANVHIFADKYLFIS*QVVNDKSMTLRVNSITTIKGEACVDMKLTSRNVLTLYRMRH 95
           VDT AN+H+ AD +LF S QV    S+ +   S+  + G   VD+K TS   + L  ++H
Sbjct: 267 VDTGANIHVCADIFLFSSYQVGRGSSLLMGNGSLAAVHGVGMVDLKFTSGKTVQLKNVQH 326

Query: 94  VPMIRQ 77
           VP I++
Sbjct: 327 VPSIKK 332