BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00031537
         (281 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP40768.1 Retrovirus-related Pol polyprotein from transposon TN...    44   2e-06
KYP40767.1 Retrovirus-related Pol polyprotein from transposon TN...    44   3e-06
KYP40770.1 Retrovirus-related Pol polyprotein from transposon TN...    42   6e-06
BAK64102.1 gag-pol polyprotein [Eustoma exaltatum subsp. russell...    43   7e-06
KYP39973.1 Copia protein, partial [Cajanus cajan]                      44   7e-06

>KYP40768.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 273

 Score = 43.5 bits (101), Expect(2) = 2e-06
 Identities = 21/48 (43%), Positives = 28/48 (58%)
 Frame = +2

Query: 74  RRVMEMEMEALHIQQTXXXXXXXXXXXXHVGCRWILTVKYQPDGTVER 217
           ++ ME+EMEAL    T             VGC+W+ TVKY+ DGT+ER
Sbjct: 185 KQAMELEMEALEKNNTWKLVTLPPGKKP-VGCKWVYTVKYRADGTIER 231



 Score = 35.0 bits (79), Expect(2) = 2e-06
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +3

Query: 219 KVRLVAKSYIQTYGVNYFEAF 281
           KVRLVAK + QTYGV+Y E F
Sbjct: 233 KVRLVAKGFTQTYGVDYLETF 253


>KYP40767.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 109

 Score = 43.5 bits (101), Expect(2) = 3e-06
 Identities = 21/48 (43%), Positives = 28/48 (58%)
 Frame = +2

Query: 74  RRVMEMEMEALHIQQTXXXXXXXXXXXXHVGCRWILTVKYQPDGTVER 217
           ++ ME+EMEAL    T             VGC+W+ TVKY+ DGT+ER
Sbjct: 21  KQAMELEMEALEKNNTWKLVTLPPGKKP-VGCKWVYTVKYRADGTIER 67



 Score = 35.0 bits (79), Expect(2) = 3e-06
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +3

Query: 219 KVRLVAKSYIQTYGVNYFEAF 281
           KVRLVAK + QTYGV+Y E F
Sbjct: 69  KVRLVAKGFTQTYGVDYLETF 89


>KYP40770.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 86

 Score = 42.4 bits (98), Expect(2) = 6e-06
 Identities = 21/45 (46%), Positives = 26/45 (57%)
 Frame = +2

Query: 83  MEMEMEALHIQQTXXXXXXXXXXXXHVGCRWILTVKYQPDGTVER 217
           ME+EMEAL    T             VGC+W+ TVKY+ DGT+ER
Sbjct: 1   MELEMEALEKNNTWKLVTLPPGKKP-VGCKWVYTVKYRADGTIER 44



 Score = 35.0 bits (79), Expect(2) = 6e-06
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +3

Query: 219 KVRLVAKSYIQTYGVNYFEAF 281
           KVRLVAK + QTYGV+Y E F
Sbjct: 46  KVRLVAKGFTQTYGVDYLETF 66


>BAK64102.1 gag-pol polyprotein [Eustoma exaltatum subsp. russellianum]
          Length = 1591

 Score = 42.7 bits (99), Expect(2) = 7e-06
 Identities = 22/51 (43%), Positives = 28/51 (54%)
 Frame = +2

Query: 74   RRVMEMEMEALHIQQTXXXXXXXXXXXXHVGCRWILTVKYQPDGTVERQSS 226
            R  M MEM+AL+   T             VGCRW+ TVKY+ DGT+ER  +
Sbjct: 1090 RDAMIMEMDALNKNNTWERCQLPPGKRT-VGCRWVFTVKYKADGTIERHKA 1139



 Score = 34.3 bits (77), Expect(2) = 7e-06
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +3

Query: 219  KVRLVAKSYIQTYGVNYFEAF 281
            K RLVAK Y QTYGV+Y E F
Sbjct: 1138 KARLVAKGYTQTYGVDYSETF 1158


>KYP39973.1 Copia protein, partial [Cajanus cajan]
          Length = 530

 Score = 43.5 bits (101), Expect(2) = 7e-06
 Identities = 21/48 (43%), Positives = 28/48 (58%)
 Frame = +2

Query: 74  RRVMEMEMEALHIQQTXXXXXXXXXXXXHVGCRWILTVKYQPDGTVER 217
           ++ ME+EMEAL    T             VGC+W+ TVKY+ DGT+ER
Sbjct: 150 KQAMELEMEALEKNNTWKLVTLPPGKKP-VGCKWVYTVKYRADGTIER 196



 Score = 33.5 bits (75), Expect(2) = 7e-06
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +3

Query: 219 KVRLVAKSYIQTYGVNYFEAF 281
           K RLVAK + QTYGV+Y E F
Sbjct: 198 KARLVAKGFTQTYGVDYLETF 218