BLASTX nr result
ID: Alisma22_contig00030174
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00030174
(219 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EOX94158.1 Uncharacterized protein TCM_003521 [Theobroma cacao] 74 1e-13
AAM94552.1 putative polyprotein [Oryza sativa Japonica Group] 74 1e-13
ABG66113.1 retrotransposon protein, putative, Ty1-copia subclass... 74 1e-13
CAE03782.2 OSJNBa0063G07.6 [Oryza sativa Japonica Group] 71 8e-13
CAH66560.1 OSIGBa0113K06.6 [Oryza sativa Indica Group] 71 8e-13
AAV31277.1 putative polyprotein [Oryza sativa Japonica Group] 71 1e-12
AAK00427.2 Putative copia-type pol polyprotein [Oryza sativa Jap... 69 4e-12
AAN60991.1 Putative Zea mays retrotransposon Opie-2 [Oryza sativ... 69 4e-12
EOY31581.1 Uncharacterized protein TCM_038519 [Theobroma cacao] 66 5e-12
ABA97851.1 retrotransposon protein, putative, Ty1-copia subclass... 69 7e-12
XP_019237825.1 PREDICTED: uncharacterized protein LOC109217974 [... 67 2e-11
KYP55915.1 Retrovirus-related Pol polyprotein from transposon TN... 67 3e-11
KYP55908.1 Retrovirus-related Pol polyprotein from transposon TN... 67 3e-11
KYP60436.1 Copia protein, partial [Cajanus cajan] 64 3e-11
KYP32507.1 Retrovirus-related Pol polyprotein from transposon TN... 67 3e-11
EOY19682.1 Uncharacterized protein TCM_044860 [Theobroma cacao] 66 5e-11
KYP50151.1 Retrovirus-related Pol polyprotein from transposon TN... 66 5e-11
KYP54577.1 Retrovirus-related Pol polyprotein from transposon TN... 66 5e-11
OMO77060.1 Zinc finger, CCHC-type [Corchorus capsularis] 66 5e-11
KYP60251.1 Copia protein, partial [Cajanus cajan] 65 6e-11
>EOX94158.1 Uncharacterized protein TCM_003521 [Theobroma cacao]
Length = 1092
Score = 73.6 bits (179), Expect = 1e-13
Identities = 39/65 (60%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +3
Query: 24 GIRNGNLYVIVLDALKTMLNRCLVVD-KNDISLWHRRLGHVNMHQMKKLSKKDLVKGLPK 200
G R N+YVI L+ LK CLV + +ND LWHRRLGHV+MH M KL KK+LV GLP
Sbjct: 537 GKRLKNMYVIFLEGLKVNSEVCLVANAENDSWLWHRRLGHVSMHTMSKLIKKNLVVGLPD 596
Query: 201 LDFEK 215
L FEK
Sbjct: 597 LKFEK 601
>AAM94552.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1584
Score = 73.6 bits (179), Expect = 1e-13
Identities = 35/68 (51%), Positives = 46/68 (67%)
Frame = +3
Query: 15 IYKGIRNGNLYVIVLDALKTMLNRCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDLVKGL 194
+YKG R GNLY++ ++ + L CLV + LWHRRL HV M+Q+ KLSK+DLV GL
Sbjct: 712 VYKGFRYGNLYLVDFNSSEANLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGL 771
Query: 195 PKLDFEKD 218
+ FEKD
Sbjct: 772 KDVKFEKD 779
>ABG66113.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2112
Score = 73.6 bits (179), Expect = 1e-13
Identities = 35/68 (51%), Positives = 46/68 (67%)
Frame = +3
Query: 15 IYKGIRNGNLYVIVLDALKTMLNRCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDLVKGL 194
+YKG R GNLY++ ++ + L CLV + LWHRRL HV M+Q+ KLSK+DLV GL
Sbjct: 712 VYKGFRYGNLYLVDFNSSEANLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGL 771
Query: 195 PKLDFEKD 218
+ FEKD
Sbjct: 772 KDVKFEKD 779
>CAE03782.2 OSJNBa0063G07.6 [Oryza sativa Japonica Group]
Length = 1539
Score = 71.2 bits (173), Expect = 8e-13
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = +3
Query: 15 IYKGIRNGNLYVIVLDALKTMLNRCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDLVKGL 194
++KG R GNLY + ++ + L CLV + LWHRRL HV M+Q+ KLSK+DLV GL
Sbjct: 622 VFKGFRYGNLYFVDFNSSEANLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGL 681
Query: 195 PKLDFEKD 218
+ FEKD
Sbjct: 682 KDVKFEKD 689
>CAH66560.1 OSIGBa0113K06.6 [Oryza sativa Indica Group]
Length = 1539
Score = 71.2 bits (173), Expect = 8e-13
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = +3
Query: 15 IYKGIRNGNLYVIVLDALKTMLNRCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDLVKGL 194
++KG R GNLY + ++ + L CLV + LWHRRL HV M+Q+ KLSK+DLV GL
Sbjct: 622 VFKGFRYGNLYFVDFNSSEANLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGL 681
Query: 195 PKLDFEKD 218
+ FEKD
Sbjct: 682 KDVKFEKD 689
>AAV31277.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1577
Score = 70.9 bits (172), Expect = 1e-12
Identities = 33/68 (48%), Positives = 45/68 (66%)
Frame = +3
Query: 15 IYKGIRNGNLYVIVLDALKTMLNRCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDLVKGL 194
++KG R GNLY++ ++ + L CLV + LWHRRL HV M+Q+ K SK+DLV GL
Sbjct: 647 VFKGFRYGNLYLVDFNSSEANLKTCLVAKTSLGWLWHRRLAHVGMNQLSKFSKRDLVMGL 706
Query: 195 PKLDFEKD 218
+ FEKD
Sbjct: 707 KDVKFEKD 714
>AAK00427.2 Putative copia-type pol polyprotein [Oryza sativa Japonica Group]
AAP51786.1 retrotransposon protein, putative,
unclassified [Oryza sativa Japonica Group]
Length = 1377
Score = 69.3 bits (168), Expect = 4e-12
Identities = 33/68 (48%), Positives = 45/68 (66%)
Frame = +3
Query: 15 IYKGIRNGNLYVIVLDALKTMLNRCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDLVKGL 194
++KG R GNLY++ ++ + L CLV + LWHRRL HV M+Q+ KLSK+DLV L
Sbjct: 593 VFKGFRYGNLYLVDFNSSEANLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVDL 652
Query: 195 PKLDFEKD 218
+ FEKD
Sbjct: 653 KDVKFEKD 660
>AAN60991.1 Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
Group] ABF94753.1 retrotransposon protein, putative,
Ty1-copia subclass [Oryza sativa Japonica Group]
Length = 2011
Score = 69.3 bits (168), Expect = 4e-12
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = +3
Query: 15 IYKGIRNGNLYVIVLDALKTMLNRCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDLVKGL 194
++KG R GNLY+ ++ + L CLV + LWHRRL HV M+Q+ KLSK+DLV GL
Sbjct: 656 VFKGFRYGNLYLGDFNSSEANLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGL 715
Query: 195 PKLDFEKD 218
+ FEKD
Sbjct: 716 KDVKFEKD 723
>EOY31581.1 Uncharacterized protein TCM_038519 [Theobroma cacao]
Length = 151
Score = 66.2 bits (160), Expect = 5e-12
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +3
Query: 24 GIRNGNLYVIVLDALKTMLNRCLVV-DKNDISLWHRRLGHVNMHQMKKLSKKDLVKGLPK 200
G R N+YVI L+ LK CL+V D+ND LWH+RL H +MH + KL +++LV GLPK
Sbjct: 80 GKRIKNMYVIFLEDLKLDCETCLMVTDENDSWLWHQRLRHASMHTILKLVRRNLVIGLPK 139
Query: 201 LDFEKD 218
+ FE D
Sbjct: 140 IKFEND 145
>ABA97851.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 851
Score = 68.6 bits (166), Expect = 7e-12
Identities = 35/72 (48%), Positives = 45/72 (62%)
Frame = +3
Query: 3 SYNVIYKGIRNGNLYVIVLDALKTMLNRCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDL 182
S I KG R GNLY++ ++ + L CLV + LWHRRL HV M+Q+ KLSK+DL
Sbjct: 341 SLGFIRKGFRYGNLYLVDFNSSEANLKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDL 400
Query: 183 VKGLPKLDFEKD 218
V L + FEKD
Sbjct: 401 VVDLKDVKFEKD 412
>XP_019237825.1 PREDICTED: uncharacterized protein LOC109217974 [Nicotiana
attenuata]
Length = 528
Score = 67.4 bits (163), Expect = 2e-11
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +3
Query: 9 NVIYKGIRNGNLYVIVLDALKTMLNRCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDLVK 188
+V Y G R+ N+Y I + +L + CL V +D LWHRRLGHV++ Q+ KL+ +DLV
Sbjct: 360 DVYYMGKRHNNVYKISIMSLTQSEHTCLSVVNDDPLLWHRRLGHVSLSQLNKLAARDLVL 419
Query: 189 GLPKLDF 209
GLPK++F
Sbjct: 420 GLPKVEF 426
>KYP55915.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 751
Score = 67.0 bits (162), Expect = 3e-11
Identities = 31/70 (44%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +3
Query: 12 VIYKGIRNGNLYVIVLDALKTMLN-RCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDLVK 188
+I+ G R N+Y++ L+ T+ N +CL+ +++I LWHRR H++M + KLS+K+LV
Sbjct: 87 IIFIGKRIDNIYMLDLEHSITIFNTKCLITKEHNIWLWHRRAAHIHMDHLNKLSRKNLVI 146
Query: 189 GLPKLDFEKD 218
GLPK+ F KD
Sbjct: 147 GLPKIKFSKD 156
>KYP55908.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 762
Score = 67.0 bits (162), Expect = 3e-11
Identities = 31/70 (44%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +3
Query: 12 VIYKGIRNGNLYVIVLDALKTMLN-RCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDLVK 188
+I+ G R N+Y++ L+ T+ N +CL+ +++I LWHRR H++M + KLS+K+LV
Sbjct: 98 IIFIGKRIDNIYMLDLEHSITIFNTKCLITKEHNIWLWHRRAAHIHMDHLNKLSRKNLVI 157
Query: 189 GLPKLDFEKD 218
GLPK+ F KD
Sbjct: 158 GLPKIKFSKD 167
>KYP60436.1 Copia protein, partial [Cajanus cajan]
Length = 154
Score = 64.3 bits (155), Expect = 3e-11
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +3
Query: 24 GIRNGNLYVIVLDALKTMLN-RCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDLVKGLPK 200
G R N+Y++ L+ T+ N +CL+ ++++ LWHRR H+ M+ + KLS+K+L+ GLPK
Sbjct: 45 GKRIDNIYMLDLEHSITISNTKCLITKEDNVWLWHRRAAHIRMNHLNKLSRKELIIGLPK 104
Query: 201 LDFEKD 218
L F KD
Sbjct: 105 LKFSKD 110
>KYP32507.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 588
Score = 66.6 bits (161), Expect = 3e-11
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 SYNVIYKGIRNGNLYVIVLDALKTMLN-RCLVVDKNDISLWHRRLGHVNMHQMKKLSKKD 179
S + + G R N+Y++ L+ TM N +CL+ + +I LWHRR H++M + KLS+K+
Sbjct: 84 SKEIRFIGKRIDNIYMLDLEHSITMSNTKCLITQEENIWLWHRRAAHIHMDHLNKLSRKE 143
Query: 180 LVKGLPKLDFEKD 218
LV GLPKL F KD
Sbjct: 144 LVVGLPKLKFGKD 156
>EOY19682.1 Uncharacterized protein TCM_044860 [Theobroma cacao]
Length = 505
Score = 66.2 bits (160), Expect = 5e-11
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +3
Query: 12 VIYKGIRNGNLYVIVLDALKTMLNRCLVVD-KNDISLWHRRLGHVNMHQMKKLSKKDLVK 188
+ + G R N++VI L+ LK CL+ + +ND LWHRRLGHV+M+ M KL KK+L+
Sbjct: 86 ISFIGNRLKNMHVIFLEVLKVNSEVCLIANAENDSWLWHRRLGHVSMNTMSKLIKKNLIT 145
Query: 189 GLPKLDFEKD 218
GL +L FE D
Sbjct: 146 GLLELKFEND 155
>KYP50151.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1006
Score = 66.2 bits (160), Expect = 5e-11
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 SYNVIYKGIRNGNLYVIVLDALKTMLN-RCLVVDKNDISLWHRRLGHVNMHQMKKLSKKD 179
S + + G R N+Y++ L+ TM N +CL+ + I LWHRR H++M + KLS+K+
Sbjct: 84 SKEIRFIGKRIDNIYMLDLEHSITMSNTKCLITQEESIWLWHRRAAHIHMDHLNKLSRKE 143
Query: 180 LVKGLPKLDFEKD 218
LV GLPKL F KD
Sbjct: 144 LVVGLPKLKFGKD 156
>KYP54577.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 310
Score = 65.9 bits (159), Expect = 5e-11
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +3
Query: 18 YKGIRNGNLYVIVLDALKTMLN-RCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDLVKGL 194
Y G R N+Y++ L+ + N +CL+ +++I LWHRR H++M+ + KLS+K+LV GL
Sbjct: 99 YIGKRIDNIYMLDLEHSIAISNTKCLITQEDNIWLWHRRAAHIHMNHLNKLSRKELVVGL 158
Query: 195 PKLDFEKD 218
PKL F KD
Sbjct: 159 PKLKFSKD 166
>OMO77060.1 Zinc finger, CCHC-type [Corchorus capsularis]
Length = 2110
Score = 66.2 bits (160), Expect = 5e-11
Identities = 32/70 (45%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +3
Query: 12 VIYKGIRNGNLYVIVLDALKTMLNRCLVVDKNDIS-LWHRRLGHVNMHQMKKLSKKDLVK 188
+I+ G R+GN+Y++ LD L+ + CL+V+ S LWH+RLGH ++ + KL KDLV
Sbjct: 1458 LIFIGKRHGNVYIVYLDDLQLNKDVCLMVNDATASWLWHKRLGHASLSTIAKLISKDLVS 1517
Query: 189 GLPKLDFEKD 218
GLPKL+F +
Sbjct: 1518 GLPKLNFNSN 1527
>KYP60251.1 Copia protein, partial [Cajanus cajan]
Length = 221
Score = 64.7 bits (156), Expect = 6e-11
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +3
Query: 24 GIRNGNLYVIVLDALKTMLN-RCLVVDKNDISLWHRRLGHVNMHQMKKLSKKDLVKGLPK 200
G R N+Y++ L+ T+ N +CL+ +++I LWHRR H++M + KLS+K+LV GLPK
Sbjct: 101 GKRIDNIYMLDLEHSITISNTKCLITKEDNIWLWHRRAAHIHMDHLNKLSRKELVIGLPK 160
Query: 201 LDFEKD 218
L F KD
Sbjct: 161 LKFSKD 166