BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00030071
         (506 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABA94723.1 retrotransposon protein, putative, Ty1-copia subclass...   140   9e-39
KYP65229.1 Retrovirus-related Pol polyprotein from transposon TN...   136   3e-36
AAT44162.1 putative polyprotein [Oryza sativa Japonica Group]         142   4e-36
KYP48154.1 Retrovirus-related Pol polyprotein from transposon TN...   132   1e-35
ABF94929.1 retrotransposon protein, putative, Ty1-copia subclass...   140   2e-35
AAR01716.1 putative Gag and Pol polyprotein [Oryza sativa Japoni...   140   2e-35
AAN61480.1 Putative polyprotein from transposon TNT [Oryza sativ...   140   2e-35
AAW56912.1 hypothetical protein [Oryza sativa Japonica Group]         139   3e-35
AAO60021.1 putative polyprotein [Oryza sativa Japonica Group] AB...   139   3e-35
ABA93525.1 retrotransposon protein, putative, Ty1-copia subclass...   138   8e-35
ABA99836.1 retrotransposon protein, putative, Ty1-copia subclass...   138   8e-35
AAT93952.1 hypothetical protein [Oryza sativa Japonica Group] AA...   136   9e-35
ABA96419.1 retrotransposon protein, putative, Ty1-copia subclass...   138   1e-34
AAT58846.1 putative polyprotein [Oryza sativa Japonica Group]         138   1e-34
ABA98797.2 retrotransposon protein, putative, Ty1-copia subclass...   138   1e-34
AAX96223.1 retrotransposon protein, putative, Ty1-copia sub-clas...   138   1e-34
AAR01682.1 putative gag and pol protein [Oryza sativa Japonica G...   138   1e-34
AAP20858.1 retrotransposon protein, putative, Ty1-copia sub-clas...   138   1e-34
CAE01299.2 OSJNBa0020P07.16 [Oryza sativa Japonica Group]             138   1e-34
CAD40744.2 OSJNBa0072D21.4 [Oryza sativa Japonica Group]              138   1e-34

>ABA94723.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 208

 Score =  140 bits (352), Expect = 9e-39
 Identities = 74/166 (44%), Positives = 106/166 (63%)
 Frame = -2

Query: 499 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
           I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+E ++D+ WIS + 
Sbjct: 36  ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTMELGLHYTGYPAVLEEYSDSNWISDVD 95

Query: 319 RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                 GYV  LGG VV++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 96  EIKATSGYVFTLGGGVVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRNLLMDLPIVE 155

Query: 139 KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
           KL+ AI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 156 KLVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 201


>KYP65229.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 322

 Score =  136 bits (343), Expect = 3e-36
 Identities = 64/166 (38%), Positives = 103/166 (62%)
 Frame = -2

Query: 499 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
           I + V +LSRYT CPN+ HWEAL R++RY++G    G++Y  +P V+EG++D  WIS   
Sbjct: 109 IAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWISNSD 168

Query: 319 RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                 GYV  LGG  +A+R  +Q+I ++ST E+E  A +    EAE L   ++++P+  
Sbjct: 169 ETKSTSGYVFTLGGGAIAWRSVRQSIIARSTMESEFVALEMTSTEAEWLRNFLANIPLGM 228

Query: 139 KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
           K   ++S+HYD+   +   KN  Y  K +RHIQ++ N  ++++ +G
Sbjct: 229 KPTPSVSIHYDNQSAIAISKNKSYNGK-NRHIQLRHNIAKQMLKDG 273


>AAT44162.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  142 bits (358), Expect = 4e-36
 Identities = 74/166 (44%), Positives = 107/166 (64%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y +YP V+EG++D+ WIS + 
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTRYPAVLEGYSDSNWISDVD 1158

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            KL+ AI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 1219 KLVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 1264


>KYP48154.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 223

 Score =  132 bits (332), Expect = 1e-35
 Identities = 63/166 (37%), Positives = 102/166 (61%)
 Frame = -2

Query: 499 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
           I + V +L+RYT CPN+ HWEAL R++RY++G    G++Y  +P V+EG++D  WIS + 
Sbjct: 16  IAYAVSRLNRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWISDLD 75

Query: 319 RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                 GYV  LGG  +A R  +Q+I ++ST E+E  A +    EAE L   ++++P+  
Sbjct: 76  ETKSTSGYVFTLGGGAIASRSVRQSIIARSTMESEFVALEMTSTEAEWLRNFLANIPLGM 135

Query: 139 KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
           K   ++S+H D+   +   KN  Y  K +RHIQ++ N  ++L+ +G
Sbjct: 136 KPTPSVSIHCDNQSAIAIAKNKSYNGK-NRHIQLRHNIVKQLLKDG 180


>ABF94929.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1284

 Score =  140 bits (352), Expect = 2e-35
 Identities = 74/166 (44%), Positives = 106/166 (63%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I FVV KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 994  ISFVVSKLSRFTSNPGDNHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1053

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 1054 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPIVE 1113

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 1114 KPVPAIVMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 1159


>AAR01716.1 putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  140 bits (352), Expect = 2e-35
 Identities = 74/166 (44%), Positives = 105/166 (63%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+   +  + NSK   K  RH++ ++   R+L ++G
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSG 1264


>AAN61480.1 Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  140 bits (352), Expect = 2e-35
 Identities = 74/166 (44%), Positives = 105/166 (63%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+   +  + NSK   K  RH++ ++   R+L ++G
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSG 1264


>AAW56912.1 hypothetical protein [Oryza sativa Japonica Group]
          Length = 913

 Score =  139 bits (351), Expect = 3e-35
 Identities = 73/166 (43%), Positives = 105/166 (63%)
 Frame = -2

Query: 499 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
           I F V KLSR+TS P   HW AL+RV+ Y+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 366 ISFAVSKLSRFTSNPGDDHWRALERVMHYLKGTMELGLHYSGYPAVLEGYSDSNWISDVD 425

Query: 319 RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                 GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 426 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPIVE 485

Query: 139 KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
           K +LAI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 486 KPVLAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 531


>AAO60021.1 putative polyprotein [Oryza sativa Japonica Group] ABF99553.1
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1224

 Score =  139 bits (351), Expect = 3e-35
 Identities = 73/166 (43%), Positives = 107/166 (64%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 1021 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1080

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
            +     GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 1081 KIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1140

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+ + +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 1141 KPVPAILMNCDNQMVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 1186


>ABA93525.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1235

 Score =  138 bits (348), Expect = 8e-35
 Identities = 73/166 (43%), Positives = 106/166 (63%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 1032 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1091

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++ +LP+V+
Sbjct: 1092 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMNLPVVE 1151

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 1152 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 1197


>ABA99836.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  138 bits (348), Expect = 8e-35
 Identities = 73/166 (43%), Positives = 105/166 (63%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 1219 KPVSAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 1264


>AAT93952.1 hypothetical protein [Oryza sativa Japonica Group] AAT94012.1
           hypothetical protein [Oryza sativa Japonica Group]
          Length = 493

 Score =  136 bits (342), Expect = 9e-35
 Identities = 71/166 (42%), Positives = 105/166 (63%)
 Frame = -2

Query: 499 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
           I F V KLS++TS P   HW A++RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 188 ISFAVSKLSQFTSNPGDDHWRAVERVMRYLKGTMELGLHYSGYPAVLEGYSDSNWISDVD 247

Query: 319 RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                 GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 248 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLCDLLMDLPIVE 307

Query: 139 KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
           K +L I ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 308 KPVLTILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 353


>ABA96419.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  138 bits (347), Expect = 1e-34
 Identities = 73/166 (43%), Positives = 105/166 (63%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 892  ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 951

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 952  EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1011

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 1012 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 1057


>AAT58846.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1229

 Score =  138 bits (347), Expect = 1e-34
 Identities = 73/166 (43%), Positives = 105/166 (63%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 1026 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1085

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 1086 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1145

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 1146 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 1191


>ABA98797.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1243

 Score =  138 bits (347), Expect = 1e-34
 Identities = 73/166 (43%), Positives = 104/166 (62%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EGH+D+ WIS + 
Sbjct: 1040 ISFAVSKLSRFTSNPGDDHWRALERVIRYLKGTVELGLHYTGYPAVLEGHSDSNWISDVD 1099

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++   P+V+
Sbjct: 1100 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDQPVVE 1159

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 1160 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 1205


>AAX96223.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] ABA92679.1 retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1302

 Score =  138 bits (347), Expect = 1e-34
 Identities = 73/166 (43%), Positives = 105/166 (63%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 1264


>AAR01682.1 putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  138 bits (347), Expect = 1e-34
 Identities = 73/166 (43%), Positives = 105/166 (63%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 1264


>AAP20858.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  138 bits (347), Expect = 1e-34
 Identities = 73/166 (43%), Positives = 105/166 (63%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 1264


>CAE01299.2 OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score =  138 bits (347), Expect = 1e-34
 Identities = 73/166 (43%), Positives = 105/166 (63%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 1071 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1130

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 1131 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1190

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 1191 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 1236


>CAD40744.2 OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  138 bits (347), Expect = 1e-34
 Identities = 73/166 (43%), Positives = 105/166 (63%)
 Frame = -2

Query: 499  IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGICSLGLQYGKYPYVVEGHNDTRWISMIS 320
            I F V KLSR+TS P   HW AL+RV+RY+KG   LGL Y  YP V+EG++D+ WIS + 
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVD 1158

Query: 319  RNNGVCGYVIMLGGDVVAYRFKKQTISSQSTFEAELCASDEAGLEAE*LHRVMSSLPMVK 140
                  GYV  LGG  V++R  KQTI ++ST EAEL A D A +EAE L  ++  LP+V+
Sbjct: 1159 EIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVE 1218

Query: 139  KLLLAISVHYDSTITMDNIKNSKYIQKHHRHIQVKINFDRELVSNG 2
            K + AI ++ D+   +  + +SK   K  RH++ ++   R+L ++G
Sbjct: 1219 KPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSG 1264