BLASTX nr result
ID: Alisma22_contig00030070
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00030070
(381 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011070197.1 PREDICTED: uncharacterized protein LOC105155911 [... 100 3e-30
AAT38766.2 Polyprotein, putative [Solanum demissum] 74 2e-21
CAN66576.1 hypothetical protein VITISV_016964 [Vitis vinifera] 77 3e-21
AAW57815.1 putative polyprotein [Oryza sativa Japonica Group] 83 4e-21
AAT39267.1 putative polyprotein [Oryza sativa Japonica Group] AA... 80 8e-21
KYP64290.1 Retrovirus-related Pol polyprotein from transposon TN... 82 8e-21
KYP64289.1 Retrovirus-related Pol polyprotein from transposon TN... 82 8e-21
KYP54652.1 Retrovirus-related Pol polyprotein from transposon TN... 82 8e-21
OMO62209.1 Zinc finger, CCHC-type [Corchorus capsularis] 77 8e-21
AAT44162.1 putative polyprotein [Oryza sativa Japonica Group] 82 1e-20
ABF94929.1 retrotransposon protein, putative, Ty1-copia subclass... 82 1e-20
KYP65229.1 Retrovirus-related Pol polyprotein from transposon TN... 82 1e-20
AAV43866.1 putative polyprotein [Oryza sativa Japonica Group] AA... 79 1e-20
AAN61480.1 Putative polyprotein from transposon TNT [Oryza sativ... 80 2e-20
ABF98943.1 retrotransposon protein, putative, unclassified, expr... 80 2e-20
AAT77367.1 putative polyprotein [Oryza sativa Japonica Group] AA... 81 2e-20
AAX96832.1 retrotransposon protein, putative, Ty1-copia sub-clas... 80 2e-20
AAT69606.1 putative polyprotein [Oryza sativa Japonica Group] AA... 80 2e-20
AAR01682.1 putative gag and pol protein [Oryza sativa Japonica G... 80 2e-20
AAR01716.1 putative Gag and Pol polyprotein [Oryza sativa Japoni... 80 2e-20
>XP_011070197.1 PREDICTED: uncharacterized protein LOC105155911 [Sesamum indicum]
Length = 512
Score = 100 bits (250), Expect(2) = 3e-30
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIAVNS 360
I F V KL RYTSCP+KTHW ALDRVLRY+KGT SL ++Y + P V+EGYSDASWIA NS
Sbjct: 406 ISFSVFKLVRYTSCPDKTHWGALDRVLRYLKGTVSLAIYYARFPVVLEGYSDASWIAKNS 465
Query: 361 GSNGVSG 381
GSN SG
Sbjct: 466 GSNRCSG 472
Score = 58.5 bits (140), Expect(2) = 3e-30
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +2
Query: 17 KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
KI ++F Y ++++ KTPYD S LFKN GV V+QL+YSQ I S +YL N TR
Sbjct: 351 KIIKKFGYQNNRIAKTPYDPSVALFKNKSGVPVAQLRYSQVIGSLQYLANGTR 403
>AAT38766.2 Polyprotein, putative [Solanum demissum]
Length = 1355
Score = 73.6 bits (179), Expect(2) = 2e-21
Identities = 33/61 (54%), Positives = 46/61 (75%)
Frame = +1
Query: 193 VCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIAVNSGSNG 372
+ KLSR+TS PN+THW A+ VL Y+K ++ LHY K+P+++EGYSDA+WI +GSN
Sbjct: 1062 ISKLSRFTSNPNQTHWMAMKHVLGYLKHSQHYALHYNKYPAMIEGYSDANWI---TGSNE 1118
Query: 373 V 375
V
Sbjct: 1119 V 1119
Score = 55.8 bits (133), Expect(2) = 2e-21
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HY+ KI ++F+Y + +VK P DLS T KN VG SQL+Y++ + S Y+MNCTR
Sbjct: 1000 HYIEKILDKFKYLNFNVVKIPIDLSCTFQKN-VGESDSQLEYARVLGSLMYIMNCTR 1055
>CAN66576.1 hypothetical protein VITISV_016964 [Vitis vinifera]
Length = 1316
Score = 76.6 bits (187), Expect(2) = 3e-21
Identities = 33/67 (49%), Positives = 50/67 (74%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIAVNS 360
I + V KLSR+TS P + HW+++ RVL Y+K T++ GLH+ ++P+V+EGYSDA+WI+ +
Sbjct: 1111 IAYSVSKLSRFTSNPGENHWKSIIRVLGYLKYTQNYGLHFTRYPAVLEGYSDANWISDSK 1170
Query: 361 GSNGVSG 381
S SG
Sbjct: 1171 DSKSTSG 1177
Score = 52.4 bits (124), Expect(2) = 3e-21
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HY+ KI E+F+ + KTP D++ LFKN G+ SQL+YS I S Y+MNCTR
Sbjct: 1053 HYIEKILEKFKKYDIRPKKTPMDVNLHLFKN-TGIGKSQLEYSHIIGSLMYVMNCTR 1108
>AAW57815.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1109
Score = 83.2 bits (204), Expect(2) = 4e-21
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIA 351
I F V KLSR+TS P HW AL+RV+RY+KGT LGLHY ++P+V+EGYSD++WI+
Sbjct: 906 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTMELGLHYSRYPAVLEGYSDSNWIS 962
Score = 45.4 bits (106), Expect(2) = 4e-21
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV KI RF Y K TPYD S L KN + +QL+YSQ I S YL + TR
Sbjct: 848 HYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK-RIARNQLEYSQIIGSLMYLASATR 903
>AAT39267.1 putative polyprotein [Oryza sativa Japonica Group] AAT85181.1
putative polyprotein [Oryza sativa Japonica Group]
Length = 1297
Score = 80.1 bits (196), Expect(2) = 8e-21
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIA 351
I F V KLSR+TS P HW AL+RV+RY+KGT LGLHY +P+V+EGYSD++WI+
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155
Score = 47.4 bits (111), Expect(2) = 8e-21
Identities = 29/57 (50%), Positives = 32/57 (56%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV KI RF Y K TPYD S L KN + SQL+YSQ I S YL + TR
Sbjct: 1041 HYVEKILNRFGYIDSKPSPTPYDPSLLLHKNK-RIARSQLEYSQIIGSLMYLASATR 1096
>KYP64290.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1215
Score = 82.4 bits (202), Expect(2) = 8e-21
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIAVNS 360
I + V +LSRYT CPN+ HWEAL R++RY++GT G+ Y P+V+EGYSDA+WI+ +
Sbjct: 1002 IAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWISDSD 1061
Query: 361 GSNGVSG 381
+ SG
Sbjct: 1062 ETKSTSG 1068
Score = 45.1 bits (105), Expect(2) = 8e-21
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV ++ ++F+Y K V TPYD++ L K + G ++Q QY+Q I S +LMN +R
Sbjct: 944 HYVERLLKKFDYYDCKSVTTPYDVNSQL-KQNKGDSLAQSQYAQIIGSLLHLMNFSR 999
>KYP64289.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1012
Score = 82.4 bits (202), Expect(2) = 8e-21
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIAVNS 360
I + V +LSRYT CPN+ HWEAL R++RY++GT G+ Y P+V+EGYSDA+WI+ +
Sbjct: 799 IAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWISDSD 858
Query: 361 GSNGVSG 381
+ SG
Sbjct: 859 ETKSTSG 865
Score = 45.1 bits (105), Expect(2) = 8e-21
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV ++ ++F+Y K V TPYD++ L K + G ++Q QY+Q I S +LMN +R
Sbjct: 741 HYVERLLKKFDYYDCKSVTTPYDVNSQL-KQNKGDSLAQSQYAQIIGSLLHLMNFSR 796
>KYP54652.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 900
Score = 82.4 bits (202), Expect(2) = 8e-21
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIAVNS 360
I + V +LSRYT CPN+ HWEAL R++RY++GT G+ Y P+V+EGYSDA+WI+ +
Sbjct: 687 IAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWISDSD 746
Query: 361 GSNGVSG 381
+ SG
Sbjct: 747 ETKSTSG 753
Score = 45.1 bits (105), Expect(2) = 8e-21
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV ++ ++F+Y K V TPYD++ L K + G ++Q QY+Q I S +LMN +R
Sbjct: 629 HYVERLLKKFDYYDCKSVTTPYDVNSQL-KQNKGDSLAQSQYAQIIGSLLHLMNFSR 684
>OMO62209.1 Zinc finger, CCHC-type [Corchorus capsularis]
Length = 869
Score = 76.6 bits (187), Expect(2) = 8e-21
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIAVNS 360
I + V KLSR+TS P+ HW+A+ R+LRY++ TR GLHY ++P+V+E YSDA+WI+
Sbjct: 672 IAYTVSKLSRFTSNPSADHWKAIVRILRYLRYTRDYGLHYTRYPAVLEAYSDANWISDIK 731
Query: 361 GSNGVSG 381
+ SG
Sbjct: 732 DTKSTSG 738
Score = 50.8 bits (120), Expect(2) = 8e-21
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTRS 178
HYV KI ERF + +TP D S L KN G +SQ++YS+ I S YLM+CTRS
Sbjct: 614 HYVDKILERFNKDDSGVARTPLDTSLHLAKNR-GEGISQVEYSRIIGSLMYLMSCTRS 670
>AAT44162.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 81.6 bits (200), Expect(2) = 1e-20
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIA 351
I F V KLSR+TS P HW AL+RV+RY+KGT LGLHY ++P+V+EGYSD++WI+
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTRYPAVLEGYSDSNWIS 1155
Score = 45.4 bits (106), Expect(2) = 1e-20
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV KI RF Y K TPYD S L KN + +QL+YSQ I S YL + TR
Sbjct: 1041 HYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK-RIARNQLEYSQIIGSLMYLASATR 1096
>ABF94929.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1284
Score = 82.0 bits (201), Expect(2) = 1e-20
Identities = 36/57 (63%), Positives = 46/57 (80%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIA 351
I FVV KLSR+TS P HW AL+RV+RY+KGT LGLHY +P+V+EGYSD++WI+
Sbjct: 994 ISFVVSKLSRFTSNPGDNHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1050
Score = 45.1 bits (105), Expect(2) = 1e-20
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV KI RF Y K TPYD S L KN + +QL+YSQ I S YL + TR
Sbjct: 936 HYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK-RIARNQLEYSQIIGSLMYLASTTR 991
>KYP65229.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 322
Score = 82.4 bits (202), Expect(2) = 1e-20
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIAVNS 360
I + V +LSRYT CPN+ HWEAL R++RY++GT G+ Y P+V+EGYSDA+WI+ +
Sbjct: 109 IAYAVSRLSRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWISNSD 168
Query: 361 GSNGVSG 381
+ SG
Sbjct: 169 ETKSTSG 175
Score = 44.7 bits (104), Expect(2) = 1e-20
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV + ++F+Y K V TPYD++ L K + G ++Q QY+Q I S +LMN +R
Sbjct: 51 HYVERFLKKFDYYDCKSVTTPYDVNSPL-KQNKGESLAQSQYAQIIGSLLHLMNFSR 106
>AAV43866.1 putative polyprotein [Oryza sativa Japonica Group] AAV44157.1
putative polyprotein [Oryza sativa Japonica Group]
Length = 1046
Score = 79.3 bits (194), Expect(2) = 1e-20
Identities = 35/67 (52%), Positives = 46/67 (68%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIAVNS 360
I F + KLSR+TS P HW AL+RV+RY+KGT LG HY +P+V+EGYSD++WI+
Sbjct: 843 ISFAMSKLSRFTSNPGDDHWRALERVMRYLKGTMELGFHYSGYPTVLEGYSDSNWISDMD 902
Query: 361 GSNGVSG 381
SG
Sbjct: 903 EIKATSG 909
Score = 47.4 bits (111), Expect(2) = 1e-20
Identities = 29/57 (50%), Positives = 33/57 (57%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV KI RF Y +K TPYD S L KN + +QLQYSQ I S YL + TR
Sbjct: 785 HYVEKILNRFGYIDNKPSPTPYDPSLLLRKNK-RIARNQLQYSQIIGSLMYLASATR 840
>AAN61480.1 Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 80.1 bits (196), Expect(2) = 2e-20
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIA 351
I F V KLSR+TS P HW AL+RV+RY+KGT LGLHY +P+V+EGYSD++WI+
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155
Score = 46.2 bits (108), Expect(2) = 2e-20
Identities = 28/57 (49%), Positives = 33/57 (57%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV KI RF Y K TPYD S +L KN + +QL+YSQ I S YL + TR
Sbjct: 1041 HYVEKILNRFGYIDSKPSPTPYDPSLSLRKNK-RIARNQLEYSQIIGSLMYLASATR 1096
>ABF98943.1 retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1460
Score = 80.1 bits (196), Expect(2) = 2e-20
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIA 351
I F V KLSR+TS P HW AL+RV+RY+KGT LGLHY +P+V+EGYSD++WI+
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155
Score = 46.2 bits (108), Expect(2) = 2e-20
Identities = 28/57 (49%), Positives = 33/57 (57%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV KI RF Y K TPYD S +L KN + +QL+YSQ I S YL + TR
Sbjct: 1041 HYVEKILNRFGYIDSKPSPTPYDPSLSLRKNK-RIARNQLEYSQIIGSLMYLASATR 1096
>AAT77367.1 putative polyprotein [Oryza sativa Japonica Group] AAU10767.1
hypothetical protein [Oryza sativa Japonica Group]
Length = 1320
Score = 80.9 bits (198), Expect(2) = 2e-20
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIA 351
I F V KLSR+TS P HW AL+RV+RY+KGT LGLHY +P+V+EGYSD++WI+
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTMELGLHYTGYPAVLEGYSDSNWIS 1155
Score = 45.4 bits (106), Expect(2) = 2e-20
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV KI RF Y K TPYD S L KN + +QL+YSQ I S YL + TR
Sbjct: 1041 HYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK-RIARNQLEYSQIIGSLMYLASATR 1096
>AAX96832.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1320
Score = 80.1 bits (196), Expect(2) = 2e-20
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIA 351
I F V KLSR+TS P HW AL+RV+RY+KGT LGLHY +P+V+EGYSD++WI+
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155
Score = 46.2 bits (108), Expect(2) = 2e-20
Identities = 28/57 (49%), Positives = 33/57 (57%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV KI RF Y K TPYD S +L KN + +QL+YSQ I S YL + TR
Sbjct: 1041 HYVEKILNRFGYIDSKPSPTPYDPSLSLRKNK-RIARNQLEYSQIIGSLMYLASATR 1096
>AAT69606.1 putative polyprotein [Oryza sativa Japonica Group] AAU90098.1
putative polyprotein [Oryza sativa Japonica Group]
Length = 1320
Score = 80.1 bits (196), Expect(2) = 2e-20
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIA 351
I F V KLSR+TS P HW AL+RV+RY+KGT LGLHY +P+V+EGYSD++WI+
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155
Score = 46.2 bits (108), Expect(2) = 2e-20
Identities = 28/57 (49%), Positives = 33/57 (57%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV KI RF Y K TPYD S +L KN + +QL+YSQ I S YL + TR
Sbjct: 1041 HYVEKILNRFGYIDSKPSPTPYDPSLSLRKNK-RIARNQLEYSQIIGSLMYLASATR 1096
>AAR01682.1 putative gag and pol protein [Oryza sativa Japonica Group]
Length = 1302
Score = 80.1 bits (196), Expect(2) = 2e-20
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIA 351
I F V KLSR+TS P HW AL+RV+RY+KGT LGLHY +P+V+EGYSD++WI+
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155
Score = 46.2 bits (108), Expect(2) = 2e-20
Identities = 28/57 (49%), Positives = 33/57 (57%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV KI RF Y K TPYD S +L KN + +QL+YSQ I S YL + TR
Sbjct: 1041 HYVEKILNRFGYIDSKPSPTPYDPSLSLRKNK-RIARNQLEYSQIIGSLMYLASATR 1096
>AAR01716.1 putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 80.1 bits (196), Expect(2) = 2e-20
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +1
Query: 181 IVFVVCKLSRYTSCPNKTHWEALDRVLRYIKGTRSLGLHYGKHPSVVEGYSDASWIA 351
I F V KLSR+TS P HW AL+RV+RY+KGT LGLHY +P+V+EGYSD++WI+
Sbjct: 1099 ISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWIS 1155
Score = 46.2 bits (108), Expect(2) = 2e-20
Identities = 28/57 (49%), Positives = 33/57 (57%)
Frame = +2
Query: 5 HYV*KIHERFEYTSHKLVKTPYDLSKTLFKNDVGVLVSQLQYSQTIESFKYLMNCTR 175
HYV KI RF Y K TPYD S +L KN + +QL+YSQ I S YL + TR
Sbjct: 1041 HYVEKILNRFGYIDSKPSPTPYDPSLSLRKNK-RIARNQLEYSQIIGSLMYLASATR 1096