BLASTX nr result
ID: Alisma22_contig00029658
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00029658
(261 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABR17577.1 unknown [Picea sitchensis] 64 4e-10
XP_016683409.1 PREDICTED: cold shock protein 1-like [Gossypium h... 60 1e-09
KHG04585.1 Cellular nucleic acid-binding [Gossypium arboreum] 61 2e-09
XP_017645125.1 PREDICTED: DNA-binding protein HEXBP [Gossypium a... 61 3e-09
XP_016755022.1 PREDICTED: DNA-binding protein HEXBP-like [Gossyp... 61 3e-09
XP_012448760.1 PREDICTED: DNA topoisomerase 3-alpha [Gossypium r... 60 3e-09
XP_009761404.1 PREDICTED: cold shock domain-containing protein 3... 61 4e-09
XP_018461297.1 PREDICTED: cold shock protein 1-like [Raphanus sa... 58 1e-08
XP_016477689.1 PREDICTED: DNA-binding protein HEXBP-like [Nicoti... 59 4e-08
XP_020092780.1 DNA topoisomerase 3-alpha-like [Ananas comosus] 59 4e-08
OAY73266.1 DNA topoisomerase 3-alpha [Ananas comosus] 59 4e-08
XP_009407099.1 PREDICTED: DNA-binding protein HEXBP-like [Musa a... 59 4e-08
XP_018463196.1 PREDICTED: DNA-binding protein HEXBP-like [Raphan... 58 6e-08
XP_016538357.1 PREDICTED: DNA topoisomerase 3-alpha-like [Capsic... 58 7e-08
JAT49308.1 Cellular nucleic acid-binding protein [Anthurium amni... 58 7e-08
XP_010941230.1 PREDICTED: DNA-binding protein HEXBP [Elaeis guin... 57 1e-07
XP_006347729.1 PREDICTED: DNA-binding protein HEXBP-like [Solanu... 57 1e-07
XP_018452565.1 PREDICTED: DNA-binding protein HEXBP-like [Raphan... 57 1e-07
XP_019233592.1 PREDICTED: cold shock domain-containing protein 3... 57 2e-07
XP_009120119.1 PREDICTED: DNA-binding protein HEXBP [Brassica rapa] 57 2e-07
>ABR17577.1 unknown [Picea sitchensis]
Length = 374
Score = 64.3 bits (155), Expect = 4e-10
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = -3
Query: 259 DGHWSKDCPLLSSKS---NADAXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVSAGHKRF 89
DGHW+KDC SS + TCFKCG+AGHWA+DCT+QVS+ S G + F
Sbjct: 294 DGHWAKDCTNSSSGLIGVSGTGQGERSSASNTCFKCGQAGHWAKDCTSQVSNSSYGGREF 353
Query: 88 SSSPY 74
+S +
Sbjct: 354 LNSSF 358
>XP_016683409.1 PREDICTED: cold shock protein 1-like [Gossypium hirsutum]
Length = 147
Score = 60.5 bits (145), Expect = 1e-09
Identities = 33/65 (50%), Positives = 39/65 (60%)
Frame = -3
Query: 259 DGHWSKDCPLLSSKSNADAXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVSAGHKRFSSS 80
DGHW+KDC + SS S A+ GTC+KCGK GHWARDCT S +AG+ S S
Sbjct: 88 DGHWAKDCHVSSSDSPAE-FGGKPAKSGTCYKCGKPGHWARDCT----SKNAGNGSKSVS 142
Query: 79 PYAGY 65
A Y
Sbjct: 143 NLASY 147
>KHG04585.1 Cellular nucleic acid-binding [Gossypium arboreum]
Length = 243
Score = 61.2 bits (147), Expect = 2e-09
Identities = 33/65 (50%), Positives = 39/65 (60%)
Frame = -3
Query: 259 DGHWSKDCPLLSSKSNADAXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVSAGHKRFSSS 80
DGHW+KDC + SS S A+ GTC+KCGK GHWARDCT S +AG+ S S
Sbjct: 184 DGHWAKDCHVSSSDSPAE-FGGKPAKSGTCYKCGKPGHWARDCT----SKNAGNSSKSVS 238
Query: 79 PYAGY 65
A Y
Sbjct: 239 NLASY 243
>XP_017645125.1 PREDICTED: DNA-binding protein HEXBP [Gossypium arboreum]
Length = 247
Score = 61.2 bits (147), Expect = 3e-09
Identities = 33/65 (50%), Positives = 39/65 (60%)
Frame = -3
Query: 259 DGHWSKDCPLLSSKSNADAXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVSAGHKRFSSS 80
DGHW+KDC + SS S A+ GTC+KCGK GHWARDCT S +AG+ S S
Sbjct: 188 DGHWAKDCHVSSSDSPAE-FGGKPAKSGTCYKCGKPGHWARDCT----SKNAGNSSKSVS 242
Query: 79 PYAGY 65
A Y
Sbjct: 243 NLASY 247
>XP_016755022.1 PREDICTED: DNA-binding protein HEXBP-like [Gossypium hirsutum]
Length = 247
Score = 61.2 bits (147), Expect = 3e-09
Identities = 33/65 (50%), Positives = 39/65 (60%)
Frame = -3
Query: 259 DGHWSKDCPLLSSKSNADAXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVSAGHKRFSSS 80
DGHW+KDC + SS S A+ GTC+KCGK GHWARDCT S +AG+ S S
Sbjct: 188 DGHWAKDCHVSSSDSPAE-FGGKPAKSGTCYKCGKPGHWARDCT----SKNAGNSSKSVS 242
Query: 79 PYAGY 65
A Y
Sbjct: 243 NLASY 247
>XP_012448760.1 PREDICTED: DNA topoisomerase 3-alpha [Gossypium raimondii]
Length = 208
Score = 60.5 bits (145), Expect = 3e-09
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = -3
Query: 259 DGHWSKDCPLLSSKSNADAXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVSAGHKRFSSS 80
DGHW+KDC + SS S A+ TC+KCGK GHWARDCT S +AG+ S S
Sbjct: 149 DGHWAKDCHVSSSDSPAEIGGKPAKSG-TCYKCGKPGHWARDCT----SKNAGNGSKSVS 203
Query: 79 PYAGY 65
A Y
Sbjct: 204 NLASY 208
>XP_009761404.1 PREDICTED: cold shock domain-containing protein 3-like [Nicotiana
sylvestris] XP_016476020.1 PREDICTED: cold shock
domain-containing protein 3-like [Nicotiana tabacum]
Length = 326
Score = 61.2 bits (147), Expect = 4e-09
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -3
Query: 256 GHWSKDCPLLSSKSNADAXXXXXXXXGTCFKCGKAGHWARDCTA 125
GHW+KDCP LSS+ +A TCFKCGK GHWA+DC++
Sbjct: 282 GHWAKDCPQLSSQHSAADGGVKYPNSSTCFKCGKPGHWAKDCSS 325
>XP_018461297.1 PREDICTED: cold shock protein 1-like [Raphanus sativus]
Length = 171
Score = 58.2 bits (139), Expect = 1e-08
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -3
Query: 259 DGHWSKDCPLLSSKSNADAXXXXXXXXG-TCFKCGKAGHWARDCTAQVSSVSAGHKRFSS 83
+GHW +DC S S+ + G C+KCGK GHWARDCTAQ ++ +G ++ S
Sbjct: 38 EGHWVRDCISQSGNSSYETGLVKPSSAGGECYKCGKEGHWARDCTAQSGNLKSGSEQVKS 97
Query: 82 SPYAG 68
S G
Sbjct: 98 SSSGG 102
Score = 53.1 bits (126), Expect = 1e-06
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -3
Query: 259 DGHWSKDCPLLSSK-SNADAXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVSAGHKRFSS 83
+GHW++DC S + G C+KCGK GHWARDCT Q +G+++F S
Sbjct: 74 EGHWARDCTAQSGNLKSGSEQVKSSSSGGECYKCGKQGHWARDCTGQ-----SGNQQFQS 128
Query: 82 S 80
S
Sbjct: 129 S 129
Score = 51.2 bits (121), Expect = 6e-06
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -3
Query: 256 GHWSKDCPLLSSKSN--ADAXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVSAGHKR 92
GHW++DC S + G C+KCGK GHWARDCT V S KR
Sbjct: 111 GHWARDCTGQSGNQQFQSSGQGKPATSGGECYKCGKPGHWARDCTVAVQSTGVPAKR 167
>XP_016477689.1 PREDICTED: DNA-binding protein HEXBP-like [Nicotiana tabacum]
Length = 331
Score = 58.5 bits (140), Expect = 4e-08
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -3
Query: 256 GHWSKDCPLLSSKSNADAXXXXXXXXGTCFKCGKAGHWARDCTA 125
GHW+KDCP SS+ A TCFKCGK GHWA+DC++
Sbjct: 287 GHWAKDCPQSSSQRTAADGGVKYPNSSTCFKCGKPGHWAKDCSS 330
>XP_020092780.1 DNA topoisomerase 3-alpha-like [Ananas comosus]
Length = 336
Score = 58.5 bits (140), Expect = 4e-08
Identities = 28/52 (53%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = -3
Query: 256 GHWSKDCPLLSSKSNAD--AXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVS 107
GHW+KDCP SS S AD GTCFKCGK GHW+RDC Q S +
Sbjct: 272 GHWAKDCPNQSSDSYADKAGSRFVSSTSGTCFKCGKPGHWSRDCPNQKSGAA 323
>OAY73266.1 DNA topoisomerase 3-alpha [Ananas comosus]
Length = 337
Score = 58.5 bits (140), Expect = 4e-08
Identities = 28/52 (53%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = -3
Query: 256 GHWSKDCPLLSSKSNAD--AXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVS 107
GHW+KDCP SS S AD GTCFKCGK GHW+RDC Q S +
Sbjct: 273 GHWAKDCPNQSSDSYADKAGSRFVSSTSGTCFKCGKPGHWSRDCPNQKSGAA 324
>XP_009407099.1 PREDICTED: DNA-binding protein HEXBP-like [Musa acuminata subsp.
malaccensis]
Length = 394
Score = 58.5 bits (140), Expect = 4e-08
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = -3
Query: 259 DGHWSKDCP--LLSSKSNADAXXXXXXXXGTCFKCGKAGHWARDCTA 125
+GHWS+DCP LLSS + TCFKCGK+GHWAR+C A
Sbjct: 319 EGHWSRDCPKQLLSSSVDMGGKHLGSTASNTCFKCGKSGHWARECPA 365
>XP_018463196.1 PREDICTED: DNA-binding protein HEXBP-like [Raphanus sativus]
Length = 417
Score = 58.2 bits (139), Expect = 6e-08
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = -3
Query: 259 DGHWSKDCPLLSSKSNADAXXXXXXXXG-TCFKCGKAGHWARDCTAQVSSVSAGHKRFSS 83
+GHW++DC S + + C+KCGK GHWARDCTAQ ++ +G ++ S
Sbjct: 284 EGHWARDCTAPSGNPSYETGLVKPSSAAGECYKCGKEGHWARDCTAQSGNLKSGSEQVKS 343
Query: 82 SPYAG 68
S G
Sbjct: 344 SSSGG 348
Score = 53.1 bits (126), Expect = 3e-06
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -3
Query: 259 DGHWSKDCPLLSSK-SNADAXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVSAGHKRFSS 83
+GHW++DC S + G C+KCGK GHWARDCT Q +G+++F S
Sbjct: 320 EGHWARDCTAQSGNLKSGSEQVKSSSSGGECYKCGKQGHWARDCTGQ-----SGNQQFQS 374
Query: 82 S 80
S
Sbjct: 375 S 375
>XP_016538357.1 PREDICTED: DNA topoisomerase 3-alpha-like [Capsicum annuum]
Length = 314
Score = 57.8 bits (138), Expect = 7e-08
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -3
Query: 256 GHWSKDCPLLSSKSNADAXXXXXXXXGTCFKCGKAGHWARDCTA 125
GHW+KDCP SS+ ++ TCFKCGK GHWA+DC++
Sbjct: 270 GHWAKDCPQSSSQRSSADGGVKYPSSSTCFKCGKPGHWAKDCSS 313
>JAT49308.1 Cellular nucleic acid-binding protein [Anthurium amnicola]
Length = 367
Score = 57.8 bits (138), Expect = 7e-08
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = -3
Query: 256 GHWSKDCPLLSSKSNADAXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVSAG 101
GHW++DCP S A+ G+CF+CG+ GHWAR+C +Q +++SAG
Sbjct: 299 GHWARDCPKNELDSRANIGGNSSASSGSCFRCGEVGHWARNCPSQDAALSAG 350
>XP_010941230.1 PREDICTED: DNA-binding protein HEXBP [Elaeis guineensis]
Length = 362
Score = 57.4 bits (137), Expect = 1e-07
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Frame = -3
Query: 259 DGHWSKDCPL--LSSKSNADAXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVSAGHKR-- 92
+GHWS++C L + ++ TCFKCGK GHWAR+C Q + +SAG +R
Sbjct: 291 EGHWSRECSKQPLDNHASIGRTHFVSSGSYTCFKCGKTGHWARECPTQDAGMSAGSRRTP 350
Query: 91 -FSSSPY 74
S +PY
Sbjct: 351 VTSRTPY 357
>XP_006347729.1 PREDICTED: DNA-binding protein HEXBP-like [Solanum tuberosum]
Length = 328
Score = 57.0 bits (136), Expect = 1e-07
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = -3
Query: 256 GHWSKDCPLLSSKSNADAXXXXXXXXGTCFKCGKAGHWARDCTA 125
GHW+KDCP SS+ +A TCF CGK GHWA+DC++
Sbjct: 284 GHWAKDCPQSSSQRSAADGGIQYSNSSTCFNCGKPGHWAKDCSS 327
>XP_018452565.1 PREDICTED: DNA-binding protein HEXBP-like [Raphanus sativus]
Length = 417
Score = 57.0 bits (136), Expect = 1e-07
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = -3
Query: 259 DGHWSKDCPLLSSKSNADAXXXXXXXXG-TCFKCGKAGHWARDCTAQVSSVSAGHKRFSS 83
+GHW++DCP S +++ G C+KCGK GHWARDCT Q +G+++F S
Sbjct: 320 EGHWARDCPAQSGNLKSESGQVKSSTSGGECYKCGKQGHWARDCTGQ-----SGNQQFQS 374
Query: 82 S 80
S
Sbjct: 375 S 375
>XP_019233592.1 PREDICTED: cold shock domain-containing protein 3-like [Nicotiana
attenuata] OIT07487.1 hypothetical protein A4A49_29370
[Nicotiana attenuata]
Length = 382
Score = 56.6 bits (135), Expect = 2e-07
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = -3
Query: 253 HWSKDCPLLSSKSNADAXXXXXXXXGTCFKCGKAGHWARDCTA 125
HW+KDCP SS+ +A TCFKCGK GHWA+DC++
Sbjct: 339 HWAKDCPQSSSQHSAADGGVKYPNSSTCFKCGKPGHWAKDCSS 381
>XP_009120119.1 PREDICTED: DNA-binding protein HEXBP [Brassica rapa]
Length = 415
Score = 56.6 bits (135), Expect = 2e-07
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -3
Query: 259 DGHWSKDCPLLSS-KSNADAXXXXXXXXGTCFKCGKAGHWARDCTAQVSSVSAGHKRFSS 83
+GHW++DC S S G C+KCGK GHWARDCTAQ ++ +G ++ S
Sbjct: 282 EGHWARDCTAQSGIPSYETGTAKPSSAAGECYKCGKEGHWARDCTAQSGNLKSGAEQVKS 341
Query: 82 S 80
S
Sbjct: 342 S 342
Score = 53.9 bits (128), Expect = 2e-06
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -3
Query: 259 DGHWSKDCPLLSSKSNADAXXXXXXXXG-TCFKCGKAGHWARDCTAQVSSVSAGHKRFSS 83
+GHW++DC S + A G C+KCGK GHWARDCT Q +G+++F S
Sbjct: 318 EGHWARDCTAQSGNLKSGAEQVKSSFSGGECYKCGKQGHWARDCTGQ-----SGNQQFQS 372
Query: 82 S 80
S
Sbjct: 373 S 373
Score = 52.8 bits (125), Expect = 4e-06
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -3
Query: 259 DGHWSKDCPLLSSKSNADAXXXXXXXXG-TCFKCGKAGHWARDCTAQ--VSSVSAGHKRF 89
+GHW++DC S + C+KCGK GHWARDCTAQ + S G +
Sbjct: 246 EGHWARDCTAQSGNPPYETGPVQPSSAAGQCYKCGKEGHWARDCTAQSGIPSYETGTAKP 305
Query: 88 SSSPYAGYK 62
SS+ YK
Sbjct: 306 SSAAGECYK 314