BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00028750
         (553 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

JAT53147.1 Retrovirus-related Pol polyprotein from transposon TN...    62   4e-08
KYP33726.1 Retrovirus-related Pol polyprotein from transposon TN...    61   1e-07
KYP72325.1 Retrovirus-related Pol polyprotein from transposon TN...    59   4e-07
CAN66576.1 hypothetical protein VITISV_016964 [Vitis vinifera]         59   5e-07
KYP31709.1 Retrovirus-related Pol polyprotein from transposon TN...    56   5e-06

>JAT53147.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Anthurium amnicola]
          Length = 524

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
 Frame = +2

Query: 23  ERKNKTLIDMVNIMLAESRVQQRM*GLF*RLSMC*IVSL*NT*RR*L-------N*EPCL 181
           ERKN+TL+DMVN ML  S + + + G    L+ C +++      + +       N +P  
Sbjct: 103 ERKNRTLLDMVNSMLCSSGLPENLWGEA-LLAACHVLNCVPPRSQKISPYETWFNRKPDY 161

Query: 182 KHLNVWGYSAKVITYDNNKIKLGPKTFDTIFIVTVENNNPNRFLVIKS 325
            HL VWG  AK+   +  K K+GPKT D +F+   EN+   RFL+IKS
Sbjct: 162 SHLRVWGCLAKIKIPEIKKRKIGPKTVDGVFLGYAENSIAYRFLIIKS 209


>KYP33726.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 880

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
 Frame = +2

Query: 23  ERKNKTLIDMVNIMLAESRVQQRM*G--LF*RLSMC*IVSL*NT*RR*L----N*EPCLK 184
           ERKN+TL+DM+N ML  S +   + G  LF    +   +   N+ +       N +P LK
Sbjct: 516 ERKNRTLLDMINAMLISSGLPDNLWGEALFTACHILNRIPYKNSDKTPYELWKNRKPNLK 575

Query: 185 HLNVWGYSAKVITYDNNKIKLGPKTFDTIFIVTVENNNPNRFLVIKS 325
           +L VWG  AKV    N K K+GPKT D +F+    ++   RFLVIKS
Sbjct: 576 YLKVWGCLAKVNIPINKKRKIGPKTVDCVFLGYSLHSTTYRFLVIKS 622


>KYP72325.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 565

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
 Frame = +2

Query: 23  ERKNKTLIDMVNIMLAESRVQQRM*G--LF*RLSMC*IVSL*NT*RR*L----N*EPCLK 184
           ERKN+TL+DM+N ML  S +   + G  LF    +   +   N+ +       N +P LK
Sbjct: 186 ERKNRTLLDMINAMLISSGLPDNLWGEALFTACHILNRIPYKNSDKTPYELWKNRKPNLK 245

Query: 185 HLNVWGYSAKVITYDNNKIKLGPKTFDTIFIVTVENNNPNRFLVIKS 325
           +L VWG  AKV    N K K+GPKT D +F+    ++   RFLVI S
Sbjct: 246 YLKVWGCLAKVNIPINKKRKIGPKTVDCVFLGYSLHSTTYRFLVINS 292


>CAN66576.1 hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 38/101 (37%), Positives = 47/101 (46%)
 Frame = +2

Query: 23  ERKNKTLIDMVNIMLAESRVQQRM*GLF*RLSMC*IVSL*NT*RR*LN*EPCLKHLNVWG 202
           ERKN+TL +M+N ML  S                               +PC K+L VWG
Sbjct: 761 ERKNRTLKEMMNAMLLSS-----------------------------GHKPCYKYLKVWG 791

Query: 203 YSAKVITYDNNKIKLGPKTFDTIFIVTVENNNPNRFLVIKS 325
             AKV      K+K+GPKT D IFI    N++  RFLV KS
Sbjct: 792 CLAKVEVPKPKKVKIGPKTIDCIFIGYANNSSAYRFLVYKS 832


>KYP31709.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 714

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
 Frame = +2

Query: 23  ERKNKTLIDMVNIMLAESRVQQRM*G--LF*RLSMC*IVSL*NT*RR*L----N*EPCLK 184
           ERKN+TL+DM+N ML  S +   + G  LF    +   +   N+ +       N +P LK
Sbjct: 514 ERKNRTLLDMINAMLISSGLPDNLWGEALFTACHILNRIPYKNSDKTPYELWKNRKPNLK 573

Query: 185 HLNVWGYSAKVITYDNNKIKLGPKTFDTIFIVTVENNNPNRFLVIKS 325
           +L VW   AKV    N K K+GPKT D +F+    ++   RFLVI S
Sbjct: 574 YLKVWWCLAKVNIPINKKRKIGPKTVDCVFLGYSLHSTTYRFLVINS 620