BLASTX nr result
ID: Alisma22_contig00028409
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00028409
(222 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN... 71 8e-13
AAK29467.1 polyprotein-like [Solanum chilense] 71 1e-12
P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t... 70 2e-12
XP_012075359.1 PREDICTED: uncharacterized protein LOC105636646 [... 69 4e-12
OMO94644.1 Integrase, catalytic core [Corchorus capsularis] 67 4e-11
OMO51796.1 Reverse transcriptase, RNA-dependent DNA polymerase [... 64 2e-10
XP_012089941.1 PREDICTED: uncharacterized protein LOC105648231 [... 63 6e-10
OMO99089.1 Integrase, catalytic core [Corchorus capsularis] 63 8e-10
KYP32688.1 Retrovirus-related Pol polyprotein from transposon TN... 59 5e-09
KYP32690.1 Retrovirus-related Pol polyprotein from transposon TN... 59 1e-08
KYP40203.1 Retrovirus-related Pol polyprotein from transposon TN... 55 3e-08
AAR96002.1 retrotransposon-like protein [Musa acuminata] 57 9e-08
CAN81028.1 hypothetical protein VITISV_020534 [Vitis vinifera] 56 1e-07
KYP40209.1 Retrovirus-related Pol polyprotein from transposon TN... 55 1e-07
KYP55807.1 Retrovirus-related Pol polyprotein from transposon TN... 56 2e-07
KYP52740.1 Retrovirus-related Pol polyprotein from transposon TN... 55 3e-07
KYP49350.1 Retrovirus-related Pol polyprotein from transposon TN... 54 3e-07
KYP53808.1 Retrovirus-related Pol polyprotein from transposon TN... 55 3e-07
KYP42945.1 Retrovirus-related Pol polyprotein from transposon TN... 55 4e-07
XP_017701722.1 PREDICTED: LOW QUALITY PROTEIN: glutamine--tRNA l... 55 4e-07
>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1321
Score = 71.2 bits (173), Expect = 8e-13
Identities = 31/65 (47%), Positives = 40/65 (61%)
Frame = +3
Query: 27 CLHAEDDDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTS 206
C H + D EW++D+ YH +E+FT YR D G VNM N +I+ IGDI +QT
Sbjct: 277 CCHIAEPDEEWIIDSAASYHCVPKREYFTTYRKGDFGHVNMGNKSTSQIVGIGDIHLQTG 336
Query: 207 VGCTL 221
VGCTL
Sbjct: 337 VGCTL 341
>AAK29467.1 polyprotein-like [Solanum chilense]
Length = 1328
Score = 70.9 bits (172), Expect = 1e-12
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = +3
Query: 3 VVLTVQE*CLHAEDDDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRI 182
+++ +E C+H +SEWVVDT YHA+ ++ F Y D G V M N+ + +I I
Sbjct: 277 LLINEEEECMHLAGTESEWVVDTAASYHATPVRDLFCRYVAGDYGNVKMGNTSYSKIAGI 336
Query: 183 GDICIQTSVGCTL 221
GDIC +T+VGCTL
Sbjct: 337 GDICFKTNVGCTL 349
>P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease CAA32025.1 unnamed protein product
[Nicotiana tabacum]
Length = 1328
Score = 70.1 bits (170), Expect = 2e-12
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = +3
Query: 18 QE*CLHAEDDDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICI 197
+E C+H +SEWVVDT +HA+ ++ F Y D G V M N+ + +I IGDICI
Sbjct: 281 EEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICI 340
Query: 198 QTSVGCTL 221
+T+VGCTL
Sbjct: 341 KTNVGCTL 348
>XP_012075359.1 PREDICTED: uncharacterized protein LOC105636646 [Jatropha curcas]
Length = 1180
Score = 69.3 bits (168), Expect = 4e-12
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +3
Query: 27 CLHAEDDDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTS 206
C H D D+EW+VD+ YH K+ T Y++ D G + + N+ +++RIGDICI+TS
Sbjct: 721 CCHVGDADTEWIVDSGASYHCVKKKKIST-YKVGDFGTIKIGNNSVLQVVRIGDICIKTS 779
Query: 207 VGCTL 221
VGCTL
Sbjct: 780 VGCTL 784
>OMO94644.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1393
Score = 66.6 bits (161), Expect = 4e-11
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = +3
Query: 27 CLHAEDDDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTS 206
C H D EW+VDT YH+ +E FT Y++ D G M N +I+ IGDI +QTS
Sbjct: 943 CNHVVDPSIEWIVDTGATYHSVPKRELFTTYKVGDFGETRMGNKSVSQIVGIGDIVVQTS 1002
Query: 207 VGCTL 221
GCTL
Sbjct: 1003 TGCTL 1007
>OMO51796.1 Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
capsularis]
Length = 1500
Score = 64.3 bits (155), Expect = 2e-10
Identities = 29/65 (44%), Positives = 36/65 (55%)
Frame = +3
Query: 27 CLHAEDDDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTS 206
C H D EW+VD + YH +E FT Y+ D G M N +I+ IGDI +QTS
Sbjct: 525 CNHVADPSIEWIVDISAAYHCVPKRELFTTYKAGDFGETRMGNKSVSQILGIGDIVVQTS 584
Query: 207 VGCTL 221
GCTL
Sbjct: 585 TGCTL 589
>XP_012089941.1 PREDICTED: uncharacterized protein LOC105648231 [Jatropha curcas]
Length = 405
Score = 63.2 bits (152), Expect = 6e-10
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 27 CLHAEDDDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTS 206
C H D D+EW+VD+ H +E+F+ Y++ D G + M N+ + + IGDICI+TS
Sbjct: 191 CCHVGDADTEWIVDSGASDHCVPKREYFSTYKIGDFGTIRMGNNSVSQEVGIGDICIKTS 250
Query: 207 VGCTL 221
VG TL
Sbjct: 251 VGSTL 255
>OMO99089.1 Integrase, catalytic core [Corchorus capsularis]
Length = 572
Score = 62.8 bits (151), Expect = 8e-10
Identities = 29/65 (44%), Positives = 35/65 (53%)
Frame = +3
Query: 27 CLHAEDDDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTS 206
C H D EW+VDT YH +E T Y+ D G M N +I+ IGDI +QTS
Sbjct: 55 CNHVADPSIEWIVDTGATYHCVPKRELSTTYKAGDFGETRMGNKSVSQIVGIGDIVVQTS 114
Query: 207 VGCTL 221
GCTL
Sbjct: 115 TGCTL 119
>KYP32688.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 205
Score = 59.3 bits (142), Expect = 5e-09
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +3
Query: 45 DDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTSVGCTL 221
D+S W++D+ H +L KEFFT Y D G + M N F++I + D+C+QT++G L
Sbjct: 83 DESMWIIDSGAMLHVTLRKEFFTSYTSGDFGMLKMGNDVVFKVIGVSDVCLQTNMGMQL 141
>KYP32690.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 375
Score = 59.3 bits (142), Expect = 1e-08
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +3
Query: 45 DDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTSVGCTL 221
D+S W++D+ H +L KEFFT Y D G + M N F++I + D+C+QT++G L
Sbjct: 253 DESMWIIDSGAMLHVTLRKEFFTSYTSGDFGMLKMGNDVVFKVIGVSDVCLQTNMGMQL 311
>KYP40203.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 90
Score = 55.1 bits (131), Expect = 3e-08
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +3
Query: 45 DDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTSVGCTL 221
D+S W+VD+ H + KEFFT Y D G + M N ++I +GD+C+QT++G L
Sbjct: 14 DESMWIVDSGATLHVTPRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQL 72
>AAR96002.1 retrotransposon-like protein [Musa acuminata]
Length = 521
Score = 57.0 bits (136), Expect = 9e-08
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +3
Query: 39 EDDDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTSVGCT 218
E D+ W +D+ +H + +FF Y + D G V M N+ ++I+ IGDIC++TS+G
Sbjct: 190 ESQDNNWAIDSCVLFHVTSHGDFFRSYTVGDFGNVRMGNNGTYKIMGIGDICLETSIGSK 249
Query: 219 L 221
L
Sbjct: 250 L 250
>CAN81028.1 hypothetical protein VITISV_020534 [Vitis vinifera]
Length = 198
Score = 55.8 bits (133), Expect = 1e-07
Identities = 26/64 (40%), Positives = 38/64 (59%)
Frame = +3
Query: 30 LHAEDDDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTSV 209
L +D+DS WVVDTT +H ++FF+ Y G V M N I+ +GD+ ++TS+
Sbjct: 85 LELDDEDSTWVVDTTMPFHIIARRDFFSSYTSGSFGWVRMGNEVKCEIVGMGDVELETSI 144
Query: 210 GCTL 221
GC L
Sbjct: 145 GCKL 148
>KYP40209.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 169
Score = 55.1 bits (131), Expect = 1e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +3
Query: 45 DDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTSVGCTL 221
D+S W+VD+ H + KEFFT Y D G + M N ++I +GD+C+QT++G L
Sbjct: 93 DESMWIVDSGATLHVTPRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQL 151
>KYP55807.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 476
Score = 56.2 bits (134), Expect = 2e-07
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +3
Query: 45 DDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTSVGCTL 221
D+S W+VD+ H + KEFFT Y D G + M N ++I IGD+C+QT++G L
Sbjct: 6 DESMWIVDSGATLHVTPRKEFFTSYTSGDFGVLKMSNDGVSKVIGIGDVCLQTNMGMQL 64
>KYP52740.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 340
Score = 55.5 bits (132), Expect = 3e-07
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +3
Query: 45 DDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTSVGCTL 221
D+S W+VD+ H + KEFFT Y DLG + M N ++I +GD C+QT++G L
Sbjct: 248 DESMWIVDSGATLHVTPRKEFFTSYTSGDLGVLKMGNDGVSKVIGVGDFCLQTNMGMQL 306
>KYP49350.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 178
Score = 54.3 bits (129), Expect = 3e-07
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = +3
Query: 48 DSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTSVGCTL 221
+S W+VD+ H + KEFFT Y D G + M+N ++I +GD+C+QT++G L
Sbjct: 1 ESMWIVDSGATLHVTPRKEFFTSYTSGDFGVLKMDNDGVSKVIGVGDVCLQTNMGMQL 58
>KYP53808.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 464
Score = 55.5 bits (132), Expect = 3e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +3
Query: 45 DDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTSVGCTL 221
D+S W+VD+ H + KEFFT Y D G + M N ++I +GD+C+QT++G L
Sbjct: 191 DESMWIVDSGATLHVTSRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQL 249
>KYP42945.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 497
Score = 55.1 bits (131), Expect = 4e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +3
Query: 45 DDSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTSVGCTL 221
D+S W+VD+ H + KEFFT Y D G + M N ++I +GD+C+QT++G L
Sbjct: 76 DESMWIVDSGATLHVTPRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQL 134
>XP_017701722.1 PREDICTED: LOW QUALITY PROTEIN: glutamine--tRNA ligase-like
[Phoenix dactylifera]
Length = 926
Score = 55.1 bits (131), Expect = 4e-07
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +3
Query: 48 DSEWVVDTTTFYHASLSKEFFT*YRMRDLGRVNMENSRFFRIIRIGDICIQTSVGCTL 221
DS WVVD+ +H + +FF Y D G V M N +I+ +G+IC++T+VGC L
Sbjct: 642 DSNWVVDSGASFHVTSRADFFNFYTKGDFGHVRMGNEGVSQIVGMGNICLKTNVGCKL 699