BLASTX nr result

ID: Alisma22_contig00028397 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00028397
         (264 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_009415876.1 PREDICTED: pentatricopeptide repeat-containing pr...    53   5e-06
XP_010915324.1 PREDICTED: pentatricopeptide repeat-containing pr...    52   9e-06
XP_019702465.1 PREDICTED: pentatricopeptide repeat-containing pr...    52   9e-06

>XP_009415876.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Musa acuminata subsp. malaccensis]
          Length = 531

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +1

Query: 46  SPESAPPLPDANLGF-DFTGDSPPNPSPRRITLCPEADSLACLLIEHHNPFHAME 207
           SP S     D +LG  D   D+P  P+P  I    EAD+LA LL++HHNPFHAME
Sbjct: 22  SPRSLSGSLDPDLGLPDEVADAPAKPTPPPIEPSAEADALARLLLQHHNPFHAME 76


>XP_010915324.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like isoform X2 [Elaeis guineensis]
          Length = 527

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 30/64 (46%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 22  RLSLSEPDSPE--SAPPLPDANLGFDFTGDSPPNPSPRRITLCPEADSLACLLIEHHNPF 195
           R  L  P  P   S  PLP+  LGF     S P PSP  +    +AD+LA LLI HHNPF
Sbjct: 11  RRHLLPPPKPRLLSHSPLPELGLGFS---GSSPKPSPPPLRPSDDADALARLLIHHHNPF 67

Query: 196 HAME 207
           H +E
Sbjct: 68  HPLE 71


>XP_019702465.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like isoform X1 [Elaeis guineensis]
          Length = 530

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 30/64 (46%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 22  RLSLSEPDSPE--SAPPLPDANLGFDFTGDSPPNPSPRRITLCPEADSLACLLIEHHNPF 195
           R  L  P  P   S  PLP+  LGF     S P PSP  +    +AD+LA LLI HHNPF
Sbjct: 11  RRHLLPPPKPRLLSHSPLPELGLGFS---GSSPKPSPPPLRPSDDADALARLLIHHHNPF 67

Query: 196 HAME 207
           H +E
Sbjct: 68  HPLE 71


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