BLASTX nr result
ID: Alisma22_contig00028155
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Alisma22_contig00028155 (272 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_015895381.1 PREDICTED: LOW QUALITY PROTEIN: cleavage and poly... 57 1e-07 CAN61405.1 hypothetical protein VITISV_014259 [Vitis vinifera] 54 3e-06 XP_018829512.1 PREDICTED: cleavage and polyadenylation specifici... 53 5e-06 XP_011463169.1 PREDICTED: cleavage and polyadenylation specifici... 53 5e-06 XP_010651729.1 PREDICTED: cleavage and polyadenylation specifici... 53 5e-06 XP_018829511.1 PREDICTED: cleavage and polyadenylation specifici... 53 5e-06 JAT67557.1 Cleavage and polyadenylation specificity factor subun... 52 7e-06 >XP_015895381.1 PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3-II [Ziziphus jujuba] Length = 665 Score = 57.4 bits (137), Expect = 1e-07 Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 7/97 (7%) Frame = +3 Query: 3 YCCPVDTKFLETETSSDMIAPLNN----SG---WLHALRVKIENLGDIKGITEAPNELRL 161 YCCPV LE ET S I P NN +G WL L ++ + I + L++ Sbjct: 542 YCCPVSIGSLE-ETKSTDITPTNNRLCVTGRCLWLRVLFARLSSEFSGGNIQDFGEYLQV 600 Query: 162 RSLLIECCSKRSCPYRTKPEACETGRHLVYFCCAWSV 272 S + CSK +CP R +VYFCC WS+ Sbjct: 601 ESFQVSICSKDNCPNRITETQKNNSEDVVYFCCTWSI 637 >CAN61405.1 hypothetical protein VITISV_014259 [Vitis vinifera] Length = 328 Score = 53.5 bits (127), Expect = 3e-06 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 7/97 (7%) Frame = +3 Query: 3 YCCPVD------TKFLETETSSDMIAPLNNSGWLHALRVKIEN-LGDIKGITEAPNELRL 161 YCCPV TK ++ S ++++ + WLH L K+ LG I + L++ Sbjct: 215 YCCPVQIGNLERTKGMDFALSKNVVSTSDECSWLHQLFAKLSTKLGG--NIQDFGQHLQV 272 Query: 162 RSLLIECCSKRSCPYRTKPEACETGRHLVYFCCAWSV 272 S+ I C K CPYRT + V+FCC WSV Sbjct: 273 DSIHISVCLKDICPYRTTDGPQK--ESAVFFCCTWSV 307 >XP_018829512.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II isoform X2 [Juglans regia] Length = 626 Score = 52.8 bits (125), Expect = 5e-06 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 9/99 (9%) Frame = +3 Query: 3 YCCPV------DTKFLETETSSDMIAPLNNSGWLHALRVKIENLGDIKGITEAPNELRLR 164 YC P+ DTK + +SS+ ++ WL L +K+ + I ++++ Sbjct: 511 YCFPINTDNLEDTKSTDVSSSSNALSMSGRCSWLPMLYIKLSDELSGGNIQYFGEQIQVE 570 Query: 165 SLLIECCSKRSCPYR---TKPEACETGRHLVYFCCAWSV 272 S + C K CPYR + P CE V+FCC WS+ Sbjct: 571 SFSVSLCLKDRCPYRIVDSPPNKCEA----VFFCCTWSI 605 >XP_011463169.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II [Fragaria vesca subsp. vesca] Length = 636 Score = 52.8 bits (125), Expect = 5e-06 Identities = 27/90 (30%), Positives = 39/90 (43%) Frame = +3 Query: 3 YCCPVDTKFLETETSSDMIAPLNNSGWLHALRVKIENLGDIKGITEAPNELRLRSLLIEC 182 YCCP + TS + + N+ L K+ N I + L+L S+ + Sbjct: 529 YCCPAHIGNSQENTSLPLSS--TNNDLLQLFSAKLANELSEGNIQHFGDHLQLESIHVSI 586 Query: 183 CSKRSCPYRTKPEACETGRHLVYFCCAWSV 272 CS CPYR E R V+FCC+W + Sbjct: 587 CSNNDCPYRLSDNGAEEQREPVFFCCSWEM 616 >XP_010651729.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II [Vitis vinifera] Length = 649 Score = 52.8 bits (125), Expect = 5e-06 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 7/97 (7%) Frame = +3 Query: 3 YCCPVD------TKFLETETSSDMIAPLNNSGWLHALRVKIEN-LGDIKGITEAPNELRL 161 YCCPV TK ++ S ++++ + WLH L K+ LG I + L++ Sbjct: 536 YCCPVQIGNLERTKGMDFALSKNVVSTSDECSWLHLLFAKLATKLGG--NIQDFGQHLQV 593 Query: 162 RSLLIECCSKRSCPYRTKPEACETGRHLVYFCCAWSV 272 S+ I C K CPYRT + V+FCC WSV Sbjct: 594 DSIHISVCLKDICPYRTTDGPQK--EPAVFFCCTWSV 628 >XP_018829511.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Juglans regia] Length = 667 Score = 52.8 bits (125), Expect = 5e-06 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 9/99 (9%) Frame = +3 Query: 3 YCCPV------DTKFLETETSSDMIAPLNNSGWLHALRVKIENLGDIKGITEAPNELRLR 164 YC P+ DTK + +SS+ ++ WL L +K+ + I ++++ Sbjct: 552 YCFPINTDNLEDTKSTDVSSSSNALSMSGRCSWLPMLYIKLSDELSGGNIQYFGEQIQVE 611 Query: 165 SLLIECCSKRSCPYR---TKPEACETGRHLVYFCCAWSV 272 S + C K CPYR + P CE V+FCC WS+ Sbjct: 612 SFSVSLCLKDRCPYRIVDSPPNKCEA----VFFCCTWSI 646 >JAT67557.1 Cleavage and polyadenylation specificity factor subunit 3-II, partial [Anthurium amnicola] Length = 732 Score = 52.4 bits (124), Expect = 7e-06 Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 21/111 (18%) Frame = +3 Query: 3 YCCPVDTKFLE------------TETSSDMIA---------PLNNSGWLHALRVKIENLG 119 YCCPV LE T S ++A L+ WL+ L +K+ Sbjct: 606 YCCPVSISSLEKMALHQSSGMNSTSMVSSLLACSPASITGTSLSECHWLNLLLLKLRKEN 665 Query: 120 DIKGITEAPNELRLRSLLIECCSKRSCPYRTKPEACETGRHLVYFCCAWSV 272 D I A + LRL S ++ C K SC +R + E + V+FCC+WS+ Sbjct: 666 DCSHIEVASDHLRLGSFHVQFCPKDSCQHRIE-EVIHPEKLAVFFCCSWSL 715