BLASTX nr result
ID: Alisma22_contig00027709
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Alisma22_contig00027709 (427 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YP_009145147.1 hypothetical chloroplast RF2 (chloroplast) [Podoc... 47 8e-07 ANW48615.1 hypothetical chloroplast RF2 (chloroplast) [Crescenti... 40 9e-06 >YP_009145147.1 hypothetical chloroplast RF2 (chloroplast) [Podococcus barteri] AKJ85856.1 hypothetical chloroplast RF2 (chloroplast) [Podococcus barteri] Length = 898 Score = 47.0 bits (110), Expect(2) = 8e-07 Identities = 20/22 (90%), Positives = 21/22 (95%) Frame = -2 Query: 387 EKNRFQVVFDRFRINQYSIDWS 322 +KNRFQVVFDR RINQYSIDWS Sbjct: 837 QKNRFQVVFDRLRINQYSIDWS 858 Score = 33.1 bits (74), Expect(2) = 8e-07 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = -1 Query: 304 KICLSHIVSFCLTHFSF 254 KICLSH VSFC +HF F Sbjct: 873 KICLSHFVSFCPSHFPF 889 >ANW48615.1 hypothetical chloroplast RF2 (chloroplast) [Crescentia cujete] Length = 738 Score = 40.0 bits (92), Expect(2) = 9e-06 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = -1 Query: 319 RLSTKKICLSHIVSFCLTHF 260 RLSTKKICLSH VSFC +HF Sbjct: 703 RLSTKKICLSHFVSFCPSHF 722 Score = 36.6 bits (83), Expect(2) = 9e-06 Identities = 16/22 (72%), Positives = 19/22 (86%) Frame = -2 Query: 387 EKNRFQVVFDRFRINQYSIDWS 322 +K+RFQ+VFDR RINQY DWS Sbjct: 652 QKSRFQIVFDRLRINQY--DWS 671