BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00027618
         (1126 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AQL04461.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        60   1e-14
AQK65817.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        55   2e-12
EMS60091.1 Retinoblastoma-related protein 1 [Triticum urartu]          59   3e-12
AQK78701.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        57   5e-12
ONM03863.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        55   8e-12
AQK84025.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        54   8e-12
AQL03708.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        56   1e-11
AQK86945.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        56   1e-11
AQK92248.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        56   1e-11
AQK92237.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        56   1e-11
AQK92238.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] ...    56   1e-11
AQK92235.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] ...    56   1e-11
ONL97201.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        55   1e-11
AQK92256.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        56   1e-11
AQK92253.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        56   1e-11
ONM52836.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        55   1e-11
ONM32720.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        55   1e-11
AQK43188.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        55   1e-11
ONM06616.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        55   1e-11
ONM29620.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        55   1e-11

>AQL04461.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 233

 Score = 60.5 bits (145), Expect(3) = 1e-14
 Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 14/144 (9%)
 Frame = -1

Query: 625 ENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVV------ 482
           + Y+  K+DL MVF+D +   D I T ++WW+L   +     + LIKDI D VV      
Sbjct: 33  DRYKEEKKDLHMVFIDLEKAYDKIPTNLMWWALDMHKVPTKYVTLIKDIYDKVVTSVRTT 92

Query: 481 NGWTLGREIPVNFCYN*DDVVLIDESEDKVNHKVEL*RYTLESDRYKTNRNIGCVAMCVH 302
           +G T    I +         V +DES ++VN K+EL R TLES  ++ +R       C  
Sbjct: 93  DGDTNVLSINIGL-----HQVPVDESRERVNRKLELWRQTLESKGFRISRTKTKYMRCYF 147

Query: 301 GNFS*LTVLNDIG--KLDEVVIPK 236
           G     T +++ G  +L + V+PK
Sbjct: 148 G-----TTISEDGDVRLGDQVVPK 166



 Score = 35.8 bits (81), Expect(3) = 1e-14
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 252 KLLYQNMISIIYIDGDVHHDICHMITIGWMKW 157
           K+ ++ + S+   DGD+  D+ H I +GWMKW
Sbjct: 167 KVTFRYLGSMPQGDGDIDEDVSHRIKVGWMKW 198



 Score = 32.7 bits (73), Expect(3) = 1e-14
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = -3

Query: 134 SKKIPLSLKTIFYKTTIQPTMLY 66
           +K++P  LK  FY+TTI+P MLY
Sbjct: 207 NKRVPQKLKGKFYRTTIRPAMLY 229


>AQK65817.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 55.5 bits (132), Expect(3) = 2e-12
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631  LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
            L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 656  LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNVVTSVR 715

Query: 469  LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                   + P+N   +                                DDVVLI+ES   
Sbjct: 716  TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSG 775

Query: 394  VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
            V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 776  VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 829



 Score = 33.5 bits (75), Expect(3) = 2e-12
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 834 SMLQKDGDIDEDVSHRIKAGWLKW 857



 Score = 32.0 bits (71), Expect(3) = 2e-12
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGEY 54
           ++P  LK  FY+T I+P MLY  EY
Sbjct: 868 RVPHKLKGKFYRTAIRPAMLYGAEY 892


>EMS60091.1 Retinoblastoma-related protein 1 [Triticum urartu]
          Length = 747

 Score = 59.3 bits (142), Expect(3) = 3e-12
 Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 27/135 (20%)
 Frame = -1

Query: 631 LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVV---- 482
           L E YR  K+DL MVF+D +   D I    +WW+L K +     + LIKD+ D+V+    
Sbjct: 10  LMERYREQKKDLHMVFIDLEKAYDKIPQNGMWWALEKHKVPTKYITLIKDMYDNVLTSVR 69

Query: 481 ----------------NGWTLGREIPVNFCYN*-DDVVLIDESEDKVNHKVEL*RYTLES 353
                           +G T      + +C    DDVVL+D+S   VN K+EL R TLES
Sbjct: 70  TSDVDTDDFLIKDRTASGVTRDIHEDIPWCMLFVDDVVLVDDSRTGVNRKLELWRQTLES 129

Query: 352 DRYKTNRNIGCVAMC 308
             ++ +R      MC
Sbjct: 130 KGFRLSRTKTEYMMC 144



 Score = 31.2 bits (69), Expect(3) = 3e-12
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 143 IYFSKKIPLSLKTIFYKTTIQPTMLYKGE 57
           I   K++P  LK  FY+ T++P MLY  E
Sbjct: 180 ILCDKRVPQKLKGKFYRMTVRPAMLYGAE 208



 Score = 30.0 bits (66), Expect(3) = 3e-12
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 213 DGDVHHDICHMITIGWMKW 157
           DG +  D+ H I  GWMKW
Sbjct: 156 DGGIDEDVNHRIKAGWMKW 174


>AQK78701.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 57.0 bits (136), Expect(3) = 5e-12
 Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631  LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
            L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 656  LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNVVTSVR 715

Query: 469  LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                   + P+N   +                                DDVVLIDES   
Sbjct: 716  TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIDESRSG 775

Query: 394  VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
            V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 776  VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 829



 Score = 33.5 bits (75), Expect(3) = 5e-12
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 834 SMLQKDGDIDEDVSHRIKAGWLKW 857



 Score = 29.3 bits (64), Expect(3) = 5e-12
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 868 RVPHKLKGKFYRTAIRPAMLYGAE 891


>ONM03863.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 55.5 bits (132), Expect(3) = 8e-12
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631  LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
            L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 656  LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNVVTSVR 715

Query: 469  LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                   + P+N   +                                DDVVLI+ES   
Sbjct: 716  TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFADDVVLIEESRSG 775

Query: 394  VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
            V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 776  VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 829



 Score = 32.0 bits (71), Expect(3) = 8e-12
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  +GD+  D+ H I  GW+KW
Sbjct: 834 SMLQKEGDIDEDVSHRIKAGWLKW 857



 Score = 31.6 bits (70), Expect(3) = 8e-12
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+TTI+P MLY  E
Sbjct: 868 RVPRKLKGKFYRTTIRPAMLYGAE 891


>AQK84025.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 54.3 bits (129), Expect(3) = 8e-12
 Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631  LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
            L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 656  LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNVVTSVR 715

Query: 469  LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                   + P+N   +                                DDVVLI+ES   
Sbjct: 716  TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSG 775

Query: 394  VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
            V+ K+EL R TLE+  ++ +R+      C   +FS     +    LD  V+PK D +
Sbjct: 776  VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSATGYEDGDVSLDGQVVPKKDTF 829



 Score = 33.5 bits (75), Expect(3) = 8e-12
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 834 SMLQKDGDIDEDVSHRIKAGWLKW 857



 Score = 31.2 bits (69), Expect(3) = 8e-12
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+TTI+P MLY  E
Sbjct: 868 RVPHKLKGKFYRTTIRPAMLYGAE 891


>AQL03708.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 55.8 bits (133), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631  LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
            L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 656  LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNVVTSVR 715

Query: 469  LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                   + P+N   +                                DDVVLI+ES   
Sbjct: 716  TSDGDTDDFPINIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLIEESRSG 775

Query: 394  VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
            V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 776  VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMRYEDGDVSLDGQVVPKKDTF 829



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 834 SMLQKDGDIDEDVSHRIKAGWLKW 857



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 868 RVPHKLKGKFYRTAIRPAMLYGAE 891


>AQK86945.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 55.8 bits (133), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631  LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
            L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 656  LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNVVTSVR 715

Query: 469  LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                   + P+N   +                                DDVVLI+ES   
Sbjct: 716  TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSD 775

Query: 394  VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
            V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 776  VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 829



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 834 SMLQKDGDIDEDVSHRIKAGWLKW 857



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 868 RVPHKLKGKFYRTAIRPAMLYGAE 891


>AQK92248.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 844

 Score = 55.8 bits (133), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631  LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
            L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 484  LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYSNVVTSVR 543

Query: 469  LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                   + P+N   +                                DDVVLI+ES   
Sbjct: 544  TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSG 603

Query: 394  VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
            V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 604  VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 657



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 662 SMLQKDGDIDEDVSHRIKAGWLKW 685



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 696 RVPHKLKGKFYRTAIRPAMLYGAE 719


>AQK92237.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 712

 Score = 55.8 bits (133), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631 LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
           L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 352 LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYSNVVTSVR 411

Query: 469 LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                  + P+N   +                                DDVVLI+ES   
Sbjct: 412 TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSG 471

Query: 394 VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
           V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 472 VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 525



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 530 SMLQKDGDIDEDVSHRIKAGWLKW 553



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 564 RVPHKLKGKFYRTAIRPAMLYGAE 587


>AQK92238.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92243.1
           Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
           AQK92246.1 Retrovirus-related Pol polyprotein LINE-1
           [Zea mays] AQK92251.1 Retrovirus-related Pol polyprotein
           LINE-1 [Zea mays] AQK92259.1 Retrovirus-related Pol
           polyprotein LINE-1 [Zea mays] AQK92260.1
           Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
           AQK92261.1 Retrovirus-related Pol polyprotein LINE-1
           [Zea mays]
          Length = 591

 Score = 55.8 bits (133), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631 LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
           L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 231 LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYSNVVTSVR 290

Query: 469 LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                  + P+N   +                                DDVVLI+ES   
Sbjct: 291 TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSG 350

Query: 394 VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
           V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 351 VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 404



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 409 SMLQKDGDIDEDVSHRIKAGWLKW 432



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 443 RVPHKLKGKFYRTAIRPAMLYGAE 466


>AQK92235.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92242.1
           Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
           AQK92249.1 Retrovirus-related Pol polyprotein LINE-1
           [Zea mays] AQK92250.1 Retrovirus-related Pol polyprotein
           LINE-1 [Zea mays] AQK92262.1 Retrovirus-related Pol
           polyprotein LINE-1 [Zea mays]
          Length = 576

 Score = 55.8 bits (133), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631 LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
           L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 216 LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYSNVVTSVR 275

Query: 469 LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                  + P+N   +                                DDVVLI+ES   
Sbjct: 276 TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSG 335

Query: 394 VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
           V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 336 VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 389



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 394 SMLQKDGDIDEDVSHRIKAGWLKW 417



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 428 RVPHKLKGKFYRTAIRPAMLYGAE 451


>ONL97201.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 557

 Score = 55.5 bits (132), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631 LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
           L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 197 LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNVVTSVR 256

Query: 469 LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                  + P+N   +                                DDVVLI+ES   
Sbjct: 257 TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFADDVVLIEESRSG 316

Query: 394 VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
           V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 317 VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 370



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  +GD+  D+ H I +GW+KW
Sbjct: 375 SMLQKEGDIDEDVSHRIKVGWLKW 398



 Score = 29.6 bits (65), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 409 RVPRKLKGKFYRTAIRPAMLYGAE 432


>AQK92256.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 476

 Score = 55.8 bits (133), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631 LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
           L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 116 LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYSNVVTSVR 175

Query: 469 LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                  + P+N   +                                DDVVLI+ES   
Sbjct: 176 TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSG 235

Query: 394 VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
           V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 236 VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 289



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 294 SMLQKDGDIDEDVSHRIKAGWLKW 317



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 328 RVPHKLKGKFYRTAIRPAMLYGAE 351


>AQK92253.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 387

 Score = 55.8 bits (133), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631 LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
           L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 27  LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYSNVVTSVR 86

Query: 469 LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                  + P+N   +                                DDVVLI+ES   
Sbjct: 87  TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSG 146

Query: 394 VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
           V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 147 VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 200



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 205 SMLQKDGDIDEDVSHRIKAGWLKW 228



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 239 RVPHKLKGKFYRTAIRPAMLYGAE 262


>ONM52836.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 55.5 bits (132), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631  LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
            L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 656  LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNVVTSVR 715

Query: 469  LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                   + P+N   +                                DDVVLI+ES   
Sbjct: 716  TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSG 775

Query: 394  VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
            V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 776  VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 829



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 834 SMLQKDGDIDEDVSHRIKAGWLKW 857



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 868 RVPHKLKGKFYRTAIRPAMLYGAE 891


>ONM32720.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 55.5 bits (132), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631  LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
            L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 656  LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNVVTSVR 715

Query: 469  LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                   + P+N   +                                DDVVLI+ES   
Sbjct: 716  TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSG 775

Query: 394  VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
            V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 776  VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 829



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 834 SMLQKDGDIDEDVSHRIKAGWLKW 857



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 868 RVPHKLKGKFYRTAIRPAMLYGAE 891


>AQK43188.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 55.5 bits (132), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631  LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
            L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 656  LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNVVTSVR 715

Query: 469  LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                   + P+N   +                                DDVVLI+ES   
Sbjct: 716  TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSG 775

Query: 394  VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
            V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 776  VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 829



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 834 SMLQKDGDIDEDVSHRIKAGWLKW 857



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 868 RVPHKLKGKFYRTAIRPAMLYGAE 891


>ONM06616.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 55.5 bits (132), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631  LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
            L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 656  LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNVVTSVR 715

Query: 469  LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                   + P+N   +                                DDVVLI+ES   
Sbjct: 716  TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSG 775

Query: 394  VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
            V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 776  VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 829



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 834 SMLQKDGDIDEDVSHRIKAGWLKW 857



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 868 RVPHKLKGKFYRTAIRPAMLYGAE 891


>ONM29620.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 934

 Score = 55.5 bits (132), Expect(3) = 1e-11
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
 Frame = -1

Query: 631  LKENYRGNKRDLQMVFVDFDN--DWITTKVIWWSL*KKR----QLHLIKDISDSVVNGWT 470
            L E +R  K+DL MVF+D +   D +   V+WW+L K +     ++LIKD+  +VV    
Sbjct: 574  LMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNVVTSVR 633

Query: 469  LGR----EIPVNFCYN*-------------------------------DDVVLIDESEDK 395
                   + P+N   +                                DDVVLI+ES   
Sbjct: 634  TSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRSG 693

Query: 394  VNHKVEL*RYTLESDRYKTNRNIGCVAMCVHGNFS*LTVLNDIGKLDEVVIPKYDFY 224
            V+ K+EL R TLE+  ++ +R+      C   +FS +   +    LD  V+PK D +
Sbjct: 694  VSQKLELWRQTLEAKGFRLSRSKTEYMKC---DFSAMGYEDGDVSLDGQVVPKKDTF 747



 Score = 33.5 bits (75), Expect(3) = 1e-11
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 228 SIIYIDGDVHHDICHMITIGWMKW 157
           S++  DGD+  D+ H I  GW+KW
Sbjct: 752 SMLQKDGDIDEDVSHRIKAGWLKW 775



 Score = 29.3 bits (64), Expect(3) = 1e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 128 KIPLSLKTIFYKTTIQPTMLYKGE 57
           ++P  LK  FY+T I+P MLY  E
Sbjct: 786 RVPHKLKGKFYRTAIRPAMLYGAE 809