BLASTX nr result

ID: Alisma22_contig00027613 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00027613
         (715 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010227393.1 PREDICTED: DNA repair protein REV1 isoform X2 [Br...    57   9e-06
EMS65069.1 DNA repair protein REV1 [Triticum urartu]                   57   9e-06

>XP_010227393.1 PREDICTED: DNA repair protein REV1 isoform X2 [Brachypodium
            distachyon] KQK17302.1 hypothetical protein BRADI_1g33560
            [Brachypodium distachyon]
          Length = 908

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 45/137 (32%), Positives = 61/137 (44%)
 Frame = -2

Query: 693  NKLESWLKLHSKGLNNLECSIIDPEQEKNDDANLLKDLSRTDRKENPTRAEQGFQNENTS 514
            N L+SWL   S+ L N +C         NDDA   +   R      P+    G  + ++ 
Sbjct: 746  NMLKSWLGSSSEKLKN-QCREETCLLGNNDDAGTSE--LRASGSSRPSFT--GVASHSSK 800

Query: 513  ANCNFNRFDRSEPSGLISILPTDVGNIRNTISELPPISELDLDTLKSLPPDIFAEINERY 334
             N   NR  R  P                   ELPP+SELDL+ LK+LPP+I +E+N+ Y
Sbjct: 801  VNVTSNRSTRVPPV------------------ELPPLSELDLEVLKNLPPEIMSEMNDMY 842

Query: 333  GGGLSRLLENVEGDLRT 283
             G L  LL+    D  T
Sbjct: 843  KGKLHGLLDMTSRDEET 859


>EMS65069.1 DNA repair protein REV1 [Triticum urartu]
          Length = 1089

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
 Frame = -2

Query: 585  DLSRTDRKENPTRAEQGFQNENTSANCNFNR--FDRSEPSGLIS----ILPTDVGNIRNT 424
            DL R  ++ N  ++  G  +E     C+        S+ +G+ S    +  T   + R  
Sbjct: 703  DLGRGAQQGNMLKSWLGSSSEKLKKQCSERTCFLGNSDGAGVASHSSKVKLTSGRSTRVH 762

Query: 423  ISELPPISELDLDTLKSLPPDIFAEINERYGGGLSRLLENVEGD 292
             +ELPP+SELDL+ LK+LPP+I +E+N+ Y G L   L  ++GD
Sbjct: 763  AAELPPLSELDLEVLKNLPPEIISEMNDMYKGELHGFLGTIKGD 806


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