BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00027604
         (786 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

JAT42564.1 Replication factor C subunit 1 [Anthurium amnicola] J...    69   1e-09
KCW50954.1 hypothetical protein EUGRSUZ_J00591 [Eucalyptus grandis]    66   1e-08
XP_010031591.1 PREDICTED: replication factor C subunit 1 [Eucaly...    66   1e-08
ONK68848.1 uncharacterized protein A4U43_C05F16640 [Asparagus of...    59   4e-07
ERM93656.1 hypothetical protein AMTR_s00004p00160120 [Amborella ...    60   1e-06
XP_006826419.2 PREDICTED: replication factor C subunit 1 isoform...    60   2e-06
XP_011627377.1 PREDICTED: replication factor C subunit 1 isoform...    60   2e-06
ONK76241.1 uncharacterized protein A4U43_C03F25480 [Asparagus of...    59   3e-06
JAU13012.1 Replication factor C subunit 1 [Noccaea caerulescens]...    59   4e-06
XP_010248015.1 PREDICTED: replication factor C subunit 1 isoform...    58   5e-06
XP_016579712.1 PREDICTED: replication factor C subunit 1 isoform...    58   7e-06
XP_016579711.1 PREDICTED: replication factor C subunit 1 isoform...    58   7e-06
JAU56320.1 Replication factor C subunit 1 [Noccaea caerulescens]       57   9e-06
JAU44641.1 Replication factor C subunit 1 [Noccaea caerulescens]       57   9e-06

>JAT42564.1 Replication factor C subunit 1 [Anthurium amnicola] JAT60068.1
           Replication factor C subunit 1 [Anthurium amnicola]
          Length = 962

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 49/130 (37%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSEHDSEEGSKRRKTSKFF--ADV 363
           M+DIRKWFMKQH+KGNG+                   +   ++E S RRKTSK+F  A  
Sbjct: 1   MSDIRKWFMKQHDKGNGSVSKSEKTAAPAPQPQKPVDA---AKEESGRRKTSKYFVAAVQ 57

Query: 362 DPNPKQKPMKDIPTDKNSSKRKPINLAEGSDDETVGRXXXXXXXXXXXXDFVMPSDKKKH 183
           +P  K KP  +   +K  SKRK     E SD+ET               DFV+PS KKK 
Sbjct: 58  EPASKPKPKGETTIEKTPSKRKAHKAKEESDEET-RPPSAKKVHKDDDEDFVLPSAKKKS 116

Query: 182 TGTNDASKSK 153
            G    ++ K
Sbjct: 117 PGMRSTTRLK 126


>KCW50954.1 hypothetical protein EUGRSUZ_J00591 [Eucalyptus grandis]
          Length = 899

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 39/92 (42%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSE----HDSEEGSKRRKTSKFFA 369
           M+DIRKWFMK H+KGNGN                         H  +E S RRKTSK+F 
Sbjct: 1   MSDIRKWFMKSHDKGNGNAKLGKPGSSDSGKTPPAKSQPDKPVHPVQENSARRKTSKYF- 59

Query: 368 DVDPNPKQKPMKDIPTDKNSSKRKPINLAEGS 273
              P  KQKP  +I +++ S+KRKP    EGS
Sbjct: 60  ---PAEKQKPKDEIESEEVSTKRKPQKDTEGS 88


>XP_010031591.1 PREDICTED: replication factor C subunit 1 [Eucalyptus grandis]
           KCW50953.1 hypothetical protein EUGRSUZ_J00591
           [Eucalyptus grandis]
          Length = 966

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 39/92 (42%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSE----HDSEEGSKRRKTSKFFA 369
           M+DIRKWFMK H+KGNGN                         H  +E S RRKTSK+F 
Sbjct: 1   MSDIRKWFMKSHDKGNGNAKLGKPGSSDSGKTPPAKSQPDKPVHPVQENSARRKTSKYF- 59

Query: 368 DVDPNPKQKPMKDIPTDKNSSKRKPINLAEGS 273
              P  KQKP  +I +++ S+KRKP    EGS
Sbjct: 60  ---PAEKQKPKDEIESEEVSTKRKPQKDTEGS 88


>ONK68848.1 uncharacterized protein A4U43_C05F16640 [Asparagus officinalis]
          Length = 151

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSEHDSEEGSKRRKTSKFFADVDP 357
           M+DIRKWF+KQH+KGNG+                    E   E G +RRKTSK+FA+ D 
Sbjct: 1   MSDIRKWFIKQHDKGNGS--AAPKPTKPPEKPSAPSAVEKPVERGQERRKTSKYFANSDC 58

Query: 356 NPKQ--KPMKD-IPTDKNSSKRKPINLAEGSD 270
           + +Q  K +KD + T+KN+  ++      G D
Sbjct: 59  SKEQAAKAVKDEVMTEKNTPAKRKTTQKSGED 90


>ERM93656.1 hypothetical protein AMTR_s00004p00160120 [Amborella trichopoda]
          Length = 725

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSEHDSEEGSKRRKTSKFFADVDP 357
           M+DIRKWFMKQH+KGNG                    S    E+   RRKTSK+FA   P
Sbjct: 1   MSDIRKWFMKQHDKGNG--ASSQPSKPATTVSQPSKPSSVTEEKKETRRKTSKYFATAPP 58

Query: 356 NPKQKPMKDIPTDKNSSKRKPINLAEGSDD--ETVGRXXXXXXXXXXXXDFVMPSDKKKH 183
             KQ   K+  T+K+S  ++ I      +D  + +              DFV    KKK 
Sbjct: 59  EKKQGEEKN--TEKSSPVKRKIKKVGTDEDYSDEIKPPTAKKINRSEDDDFVSSVSKKKG 116

Query: 182 TGTNDASKSKR 150
            G + A ++KR
Sbjct: 117 VGISPAKETKR 127


>XP_006826419.2 PREDICTED: replication factor C subunit 1 isoform X2 [Amborella
           trichopoda]
          Length = 972

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSEHDSEEGSKRRKTSKFFADVDP 357
           M+DIRKWFMKQH+KGNG                    S    E+   RRKTSK+FA   P
Sbjct: 1   MSDIRKWFMKQHDKGNG--ASSQPSKPATTVSQPSKPSSVTEEKKETRRKTSKYFATAPP 58

Query: 356 NPKQKPMKDIPTDKNSSKRKPINLAEGSDD--ETVGRXXXXXXXXXXXXDFVMPSDKKKH 183
             KQ   K+  T+K+S  ++ I      +D  + +              DFV    KKK 
Sbjct: 59  EKKQGEEKN--TEKSSPVKRKIKKVGTDEDYSDEIKPPTAKKINRSEDDDFVSSVSKKKG 116

Query: 182 TGTNDASKSKR 150
            G + A ++KR
Sbjct: 117 VGISPAKETKR 127


>XP_011627377.1 PREDICTED: replication factor C subunit 1 isoform X1 [Amborella
           trichopoda]
          Length = 973

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSEHDSEEGSKRRKTSKFFADVDP 357
           M+DIRKWFMKQH+KGNG                    S    E+   RRKTSK+FA   P
Sbjct: 1   MSDIRKWFMKQHDKGNG--ASSQPSKPATTVSQPSKPSSVTEEKKETRRKTSKYFATAPP 58

Query: 356 NPKQKPMKDIPTDKNSSKRKPINLAEGSDD--ETVGRXXXXXXXXXXXXDFVMPSDKKKH 183
             KQ   K+  T+K+S  ++ I      +D  + +              DFV    KKK 
Sbjct: 59  EKKQGEEKN--TEKSSPVKRKIKKVGTDEDYSDEIKPPTAKKINRSEDDDFVSSVSKKKG 116

Query: 182 TGTNDASKSKR 150
            G + A ++KR
Sbjct: 117 VGISPAKETKR 127


>ONK76241.1 uncharacterized protein A4U43_C03F25480 [Asparagus officinalis]
          Length = 388

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSEHDSEEGSKRRKTSKFFADVDP 357
           M+DIRKWF+KQH+KGNG+                    E   E G +RRKTSK+FA+ D 
Sbjct: 1   MSDIRKWFIKQHDKGNGS--AAPKPTKPPEKPSAPSAVEKPVERGQERRKTSKYFANSDC 58

Query: 356 NPKQ--KPMKD-IPTDKNSSKRKPINLAEGSD 270
           + +Q  K +KD + T+KN+  ++      G D
Sbjct: 59  SKEQAAKAVKDEVMTEKNTPAKRKTTQKSGED 90


>JAU13012.1 Replication factor C subunit 1 [Noccaea caerulescens] JAU89898.1
           Replication factor C subunit 1 [Noccaea caerulescens]
          Length = 966

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 47/136 (34%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSEHDSEEGSK------RRKTSKF 375
           M+DIRKWFMK HEKGNGN                   +   SE+ S+      R+KTSK+
Sbjct: 1   MSDIRKWFMKAHEKGNGNAPKATSSQTGAAVTNAIETAPRKSEQASEDLETAARKKTSKY 60

Query: 374 FADVDPNPK-QKPMKDIPTDKNSSKRKPINLAEGSDDETVGRXXXXXXXXXXXXDFVMPS 198
           FA      K +K +++IP     +KRK   L   SDD    R            DF +PS
Sbjct: 61  FAKEKAKAKDEKEVEEIP-----AKRK---LKADSDDLVKPRPRKVVKVNDDDDDFEVPS 112

Query: 197 DKKKHTGTNDASKSKR 150
            +K    T D++ SK+
Sbjct: 113 SRK----TRDSTPSKK 124


>XP_010248015.1 PREDICTED: replication factor C subunit 1 isoform X2 [Nelumbo
           nucifera]
          Length = 974

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 45/135 (33%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSE-------HDSEEGSKRRKTSK 378
           M+DIRKWFMK+H+KGNGN                 P +        H+S EGS RRKTSK
Sbjct: 1   MSDIRKWFMKKHDKGNGNAAKPEKPNTATSQPETSPPAAASPDKPVHESGEGSGRRKTSK 60

Query: 377 FFADVDPNPKQKPMKDIPTDKNSSKRKPINLAEGSDDETVGRXXXXXXXXXXXXDFVMPS 198
           +FA       QKP  +   +   +KRK     E  + +                DFV+PS
Sbjct: 61  YFA----TDSQKPKDEKEIECTPAKRKTEKSREELNCDVKPPSAKRVHKGDEDEDFVLPS 116

Query: 197 DKKKHTGTNDASKSK 153
            KK         K K
Sbjct: 117 LKKNSAKDTPTKKLK 131


>XP_016579712.1 PREDICTED: replication factor C subunit 1 isoform X2 [Capsicum
           annuum]
          Length = 1014

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSE--HDSEEGSKRRKTSKFFADV 363
           M+DIRKWFMKQH+KG GN                        + +E + RRKTSK+FA  
Sbjct: 1   MSDIRKWFMKQHDKGTGNGSMSKNSAAEKPSPATPKAESLVQEGQETAGRRKTSKYFATD 60

Query: 362 DPNPKQKPMKDIPTDKNSSKRKPINLAEGSDDETVGRXXXXXXXXXXXXDFVMPSDKKKH 183
              PK++ ++++     S+KRK  N    S                   DFV+ S     
Sbjct: 61  KVKPKEEKVEEV-----SAKRKAQNDGGSSSANEKPPAAKRIHKAEDDDDFVLSSSA--- 112

Query: 182 TGTNDASKSKRKV 144
           TG+ D + SKR V
Sbjct: 113 TGSRDVTPSKRLV 125


>XP_016579711.1 PREDICTED: replication factor C subunit 1 isoform X1 [Capsicum
           annuum]
          Length = 1015

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSE--HDSEEGSKRRKTSKFFADV 363
           M+DIRKWFMKQH+KG GN                        + +E + RRKTSK+FA  
Sbjct: 1   MSDIRKWFMKQHDKGTGNGSMSKNSAAEKPSPATPKAESLVQEGQETAGRRKTSKYFATD 60

Query: 362 DPNPKQKPMKDIPTDKNSSKRKPINLAEGSDDETVGRXXXXXXXXXXXXDFVMPSDKKKH 183
              PK++ ++++     S+KRK  N    S                   DFV+ S     
Sbjct: 61  KVKPKEEKVEEV-----SAKRKAQNDGGSSSANEKPPAAKRIHKAEDDDDFVLSSSA--- 112

Query: 182 TGTNDASKSKRKV 144
           TG+ D + SKR V
Sbjct: 113 TGSRDVTPSKRLV 125


>JAU56320.1 Replication factor C subunit 1 [Noccaea caerulescens]
          Length = 966

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 46/136 (33%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSEHDSEEGSK------RRKTSKF 375
           M+DIRKWFMK HEKGNGN                   +   SE+ S+      R+KTSK+
Sbjct: 1   MSDIRKWFMKAHEKGNGNAPKATSSQTGAAVTNTIETAPRKSEQASEDLETAARKKTSKY 60

Query: 374 FADVDPNPK-QKPMKDIPTDKNSSKRKPINLAEGSDDETVGRXXXXXXXXXXXXDFVMPS 198
           FA      K +K ++++P     +KRK   L   SDD    R            DF +PS
Sbjct: 61  FAKEKAKAKDEKEVEEMP-----AKRK---LKADSDDLVKPRPRKVVKVDDDDDDFEVPS 112

Query: 197 DKKKHTGTNDASKSKR 150
            +K    T D++ SK+
Sbjct: 113 SRK----TRDSTPSKK 124


>JAU44641.1 Replication factor C subunit 1 [Noccaea caerulescens]
          Length = 966

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 46/136 (33%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
 Frame = -2

Query: 536 MTDIRKWFMKQHEKGNGNXXXXXXXXXXXXXXXXXPVSEHDSEEGSK------RRKTSKF 375
           M+DIRKWFMK HEKGNGN                   +   SE+ S+      R+KTSK+
Sbjct: 1   MSDIRKWFMKAHEKGNGNAPKATSSQTGVAVTNAIETAPRKSEQASEDLETAARKKTSKY 60

Query: 374 FADVDPNPK-QKPMKDIPTDKNSSKRKPINLAEGSDDETVGRXXXXXXXXXXXXDFVMPS 198
           FA      K +K ++++P     +KRK   L   SDD    R            DF +PS
Sbjct: 61  FAKEKAKAKDEKEVEEMP-----AKRK---LKADSDDLVKPRPRKVVKVDDDDDDFEVPS 112

Query: 197 DKKKHTGTNDASKSKR 150
            +K    T D++ SK+
Sbjct: 113 SRK----TRDSTPSKK 124