BLASTX nr result

ID: Alisma22_contig00027426 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00027426
         (382 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010910888.2 PREDICTED: F-box protein At2g26160, partial [Elae...    60   6e-08
XP_019190045.1 PREDICTED: F-box protein SKIP23-like [Ipomoea nil...    60   6e-08
XP_017613861.1 PREDICTED: uncharacterized protein LOC108458997 [...    59   1e-07
XP_004309073.1 PREDICTED: uncharacterized protein LOC101294028 [...    57   6e-07
XP_008810445.1 PREDICTED: F-box protein At2g26160-like [Phoenix ...    56   1e-06
XP_017255078.1 PREDICTED: F-box protein SKIP23-like [Daucus caro...    56   1e-06
XP_006342093.1 PREDICTED: F-box protein SKIP23-like [Solanum tub...    55   2e-06
KVH88705.1 Protein of unknown function DUF295 [Cynara cardunculu...    55   2e-06
XP_016684143.1 PREDICTED: uncharacterized protein LOC107902479 [...    54   6e-06
XP_004298361.1 PREDICTED: putative F-box protein At5g55150 [Frag...    53   7e-06

>XP_010910888.2 PREDICTED: F-box protein At2g26160, partial [Elaeis guineensis]
          Length = 373

 Score = 59.7 bits (143), Expect = 6e-08
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
 Frame = -3

Query: 377 MPIAPGIFDRRGPAPNFIQ-----KAVLSSDPLLNPGDWILMVIVGEFGRLCYTRAGE-E 216
           +P+ P I   R   P  ++     KAVLS+DP+++P    +M I G  G+L + R G+ +
Sbjct: 105 LPVPPSIGMERLYPPQCLRGRSLLKAVLSADPVVDPTSCTIMAINGATGKLTFCRLGDAK 164

Query: 215 WALIGDIHNGCARPEECLLMDIVHHRGNLYAATESGMVSVCDINSIQP 72
           W +I D +         +  D+VH+ G  YAAT    V VCD+ S  P
Sbjct: 165 WTVINDPYG--------IYSDLVHYNGRFYAATADPTVVVCDLASPVP 204


>XP_019190045.1 PREDICTED: F-box protein SKIP23-like [Ipomoea nil] XP_019190046.1
           PREDICTED: F-box protein SKIP23-like [Ipomoea nil]
           XP_019190047.1 PREDICTED: F-box protein SKIP23-like
           [Ipomoea nil]
          Length = 395

 Score = 59.7 bits (143), Expect = 6e-08
 Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
 Frame = -3

Query: 329 FIQKAVLSSDPLLNPGDWILMVIVGEFGRLCYTRAGEE-WALIGDIHNGCARPEECLLMD 153
           FI+K VLS +PLL P D+  M I+ + G L Y + GE  W LI D  + C         D
Sbjct: 161 FIKKVVLSGNPLLQP-DFTAMAILNQTGDLAYCKNGENSWNLIDDARSFCE--------D 211

Query: 152 IVHHRGNLYAATESGMVSVCDINSIQPNFR 63
           +++  G  YA  + G + VCD+NS  P+ R
Sbjct: 212 VIYSDGLFYAVNKFGSIVVCDVNSDSPSPR 241


>XP_017613861.1 PREDICTED: uncharacterized protein LOC108458997 [Gossypium
           arboreum]
          Length = 362

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
 Frame = -3

Query: 344 GPAPNFIQKAVLSSDPLLNPGDWILMVIVGEFGRLCYTRAGEEWALIGDIHNGCARPEEC 165
           GP    IQK VLS DPLL+P +++++VI   +GR+ + R  +E  +  D+       ++ 
Sbjct: 121 GPYTYKIQKVVLSDDPLLHPNNFVVVVIYSVYGRVAFYRPCQENWIYMDVDE-----DQS 175

Query: 164 LLMDIVHHRGNLYAATESGMVSVCDINSIQ-------PNFRPISDPIMEENCSLFKKYLV 6
           L+ DI+ H+G +YA  E   +   D+N ++       P    +   I++    L K YLV
Sbjct: 176 LISDILFHKGLVYAIGEYNNLVSFDVNGVEDDESSKPPKLNTLVPKILKLENYLHKVYLV 235


>XP_004309073.1 PREDICTED: uncharacterized protein LOC101294028 [Fragaria vesca
           subsp. vesca]
          Length = 278

 Score = 56.6 bits (135), Expect = 6e-07
 Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = -3

Query: 329 FIQKAVLSSDPLLNPGDWILMVIVGEFGRLCYTRAGE-EWALIGDIHNGCARPEECLLMD 153
           ++ K VLS+DP+L+P D+++ V+ G + +L + + G+  W L+    +     ++  + D
Sbjct: 158 YVAKVVLSADPILSPDDYVVAVLCGVYAKLAFIKKGQTSWTLVPAKDDD---GDDLYMKD 214

Query: 152 IVHHRGNLYAATESGMVSVCDINSIQPN 69
           +V HRG LY   + G++   D N    N
Sbjct: 215 LVFHRGKLYTVGDGGLMMAVDYNDHSSN 242


>XP_008810445.1 PREDICTED: F-box protein At2g26160-like [Phoenix dactylifera]
          Length = 390

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = -3

Query: 320 KAVLSSDPLLNPGDWILMVIVGEFGRLCYTRAGE-EWALIGDIHNGCARPEECLLMDIVH 144
           KAVLS+DP+++P   I+M I G  G+L + R G+  W +I D +         +  D++H
Sbjct: 146 KAVLSADPVVDPTGCIIMAINGATGKLTFCRPGDARWTVINDPYG--------IYSDLIH 197

Query: 143 HRGNLYAATESGMVSVCDINSIQP 72
           + G  YAA     V VCD+ S  P
Sbjct: 198 YNGRFYAAPADPAVVVCDLASPVP 221


>XP_017255078.1 PREDICTED: F-box protein SKIP23-like [Daucus carota subsp. sativus]
           KZM89634.1 hypothetical protein DCAR_023003 [Daucus
           carota subsp. sativus]
          Length = 397

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = -3

Query: 332 NFIQKAVLSSDPLLNPGDWILMVIVGEFGRLCYTRAG-EEWALIGDIHNGCARPEECLLM 156
           ++I+K +LS+ P  +  D+I++ I+ + G L Y +     W  I + H  C         
Sbjct: 164 SYIKKVILSASPA-SCSDYIVVAIINQTGDLAYCKNDVPTWKFIDEAHGYCE-------- 214

Query: 155 DIVHHRGNLYAATESGMVSVCDINSIQPNFRPISDP 48
           D+V+H G   A  ++G ++VCD+NS +PN   I+ P
Sbjct: 215 DVVYHNGMFMAVNKNGEIAVCDLNSDKPNVSFINTP 250


>XP_006342093.1 PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
           XP_006342094.1 PREDICTED: F-box protein SKIP23-like
           [Solanum tuberosum]
          Length = 402

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
 Frame = -3

Query: 332 NFIQKAVLSSDPLLNPGDWILMVIVGEFGRLCYTRAGEE-WALIGDIHNGCARPEECLLM 156
           +FI+KAV+SS P  +P ++I MVI+ E G L Y + GE  W  I D     AR  +    
Sbjct: 167 SFIRKAVISSSPSRDP-NFITMVILNETGELAYCKNGEHSWKFIDD-----ARFYD---E 217

Query: 155 DIVHHRGNLYAATESGMVSVCDINSIQPNFRPISDP 48
           D+++  G  YA  +SG ++VCD++   P+   I  P
Sbjct: 218 DVIYFEGLFYAVHKSGEIAVCDVSGDTPSVSFIETP 253


>KVH88705.1 Protein of unknown function DUF295 [Cynara cardunculus var.
           scolymus]
          Length = 406

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
 Frame = -3

Query: 332 NFIQKAVLSSDPLLNPGDWILMVIVGEFGRLCYTRAGEE-WALIGDIHNGCARPEECLLM 156
           +FI+K V SS P     D+  + I+ + G L Y + G+  W  I +  + C         
Sbjct: 166 SFIKKVVFSSSPSDEDSDYFALAILNQTGDLAYCKKGDSLWKFIDNAQSYCE-------- 217

Query: 155 DIVHHRGNLYAATESGMVSVCDINSIQPNFRPISDP 48
           D+V+H+G  YA ++ G ++VCDI+   P+   I  P
Sbjct: 218 DVVYHKGCFYAVSKYGTIAVCDISGPLPDVSFIPTP 253


>XP_016684143.1 PREDICTED: uncharacterized protein LOC107902479 [Gossypium
           hirsutum]
          Length = 329

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
 Frame = -3

Query: 344 GPAPNFIQKAVLSSDPLLNPGDWILMVIVGEFGRLCYTRAGEEWALIGDIHNGCARPEEC 165
           GP    IQK VLS  PLL+P +++++VI   +GR+ + R  +E  +  D+       ++ 
Sbjct: 78  GPYTYKIQKVVLSDGPLLHPNNFVVVVIYSVYGRVAFYRPCQENWIYMDVDE-----DQS 132

Query: 164 LLMDIVHHRGNLYAATESGMVSVCDINSI-------QPNFRPISDPIMEENCSLFKKYLV 6
           L+ DI+ H+G +YA  E   +   D+N +        P    +   I++    L + YLV
Sbjct: 133 LISDILFHKGLVYAIGEYNNLVSFDVNGVGDDESSKPPKLNTLVPKILKLENYLHRVYLV 192


>XP_004298361.1 PREDICTED: putative F-box protein At5g55150 [Fragaria vesca subsp.
           vesca]
          Length = 220

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
 Frame = -3

Query: 335 PNFIQKAVLSSDPLLNPGDWILMVIVGEFGRLCYTRAGE-EWALIGDIHNGCARPEECLL 159
           P +++K +LS+DP LNP +++++ I     +L + RAG+ +W  +          E  + 
Sbjct: 35  PYYVRKVILSADPSLNPDNYVVVAIYDICCKLAFIRAGQRDWTYL---------DEPYMF 85

Query: 158 MDIVHHRGNLYAATESGMVSVCDINSI-QPNFRPIS------DPIMEEN--CSLFKKYLV 6
            D + +R  +YA  + G + + D+NS   P+  PI+       PI+     C   K YLV
Sbjct: 86  SDAIFYRSQIYAVGQGGKIVLLDVNSSNDPSRPPIAKRLTPFGPILHPQFPCKADKAYLV 145

Query: 5   M 3
           +
Sbjct: 146 V 146


Top