BLASTX nr result
ID: Alisma22_contig00027385
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00027385
(428 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010270361.1 PREDICTED: F-box protein SKP2A-like [Nelumbo nuci... 75 3e-13
CBI19930.3 unnamed protein product, partial [Vitis vinifera] 72 7e-12
XP_013650071.1 PREDICTED: F-box protein SKP2B isoform X1 [Brassi... 70 1e-11
ONK56710.1 uncharacterized protein A4U43_C10F11930 [Asparagus of... 70 1e-11
XP_013650075.1 PREDICTED: F-box protein SKP2B isoform X3 [Brassi... 70 2e-11
XP_013737910.1 PREDICTED: F-box protein SKP2B-like isoform X2 [B... 70 2e-11
XP_013669584.1 PREDICTED: F-box protein SKP2B-like [Brassica napus] 68 2e-11
XP_010260457.1 PREDICTED: F-box protein SKP2A-like isoform X1 [N... 70 3e-11
XP_009106367.1 PREDICTED: F-box protein SKP2B-like isoform X1 [B... 69 5e-11
XP_019072288.1 PREDICTED: F-box protein SKP2A isoform X2 [Vitis ... 68 6e-11
XP_010260458.1 PREDICTED: F-box protein SKP2A-like isoform X2 [N... 68 9e-11
XP_013650072.1 PREDICTED: F-box protein SKP2B isoform X2 [Brassi... 68 9e-11
XP_019072286.1 PREDICTED: F-box protein SKP2B isoform X1 [Vitis ... 68 1e-10
ONK73271.1 uncharacterized protein A4U43_C04F29200 [Asparagus of... 68 1e-10
XP_013737908.1 PREDICTED: F-box protein SKP2B-like isoform X1 [B... 68 1e-10
XP_013588567.1 PREDICTED: F-box protein SKP2B-like [Brassica ole... 68 1e-10
XP_020095504.1 F-box protein SKP2A [Ananas comosus] OAY83252.1 F... 68 1e-10
XP_013626492.1 PREDICTED: F-box protein SKP2A-like isoform X2 [B... 64 2e-10
JAT54287.1 F-box protein SKP2A, partial [Anthurium amnicola] 67 2e-10
XP_013626491.1 PREDICTED: F-box protein SKP2A-like isoform X1 [B... 64 2e-10
>XP_010270361.1 PREDICTED: F-box protein SKP2A-like [Nelumbo nucifera]
XP_010270362.1 PREDICTED: F-box protein SKP2A-like
[Nelumbo nucifera]
Length = 368
Score = 75.1 bits (183), Expect = 3e-13
Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 11/66 (16%)
Frame = -1
Query: 167 ATGLEFCFMALAV---SREN--------GWKDLPMELLVKIIAITDDRTAILASGVCTGW 21
A LE CF L V RE GWKDLPMELL++I+++ DDRTAI+ASGVCTGW
Sbjct: 8 AEDLELCFQKLVVFGGGREKMGGGAVMTGWKDLPMELLLRIVSLVDDRTAIIASGVCTGW 67
Query: 20 RDAISL 3
RDAI L
Sbjct: 68 RDAICL 73
>CBI19930.3 unnamed protein product, partial [Vitis vinifera]
Length = 428
Score = 71.6 bits (174), Expect = 7e-12
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 14/97 (14%)
Frame = -1
Query: 251 SALRAESQLILSLSGSVFGLPPSEMV-TNATGLEFCFMALAVSRENG------------- 114
S L +S+L VFG EMV LEFCF L + +
Sbjct: 39 SCLAEDSRLCFLKDNLVFGT--MEMVGQGGEELEFCFERLVMGGDGRGGMDGGGVGVITE 96
Query: 113 WKDLPMELLVKIIAITDDRTAILASGVCTGWRDAISL 3
WKD+PMELL++I+A+ DDRT I+ASGVC+GWRDAI L
Sbjct: 97 WKDVPMELLLRIVALVDDRTVIMASGVCSGWRDAICL 133
>XP_013650071.1 PREDICTED: F-box protein SKP2B isoform X1 [Brassica napus]
Length = 366
Score = 70.5 bits (171), Expect = 1e-11
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -1
Query: 185 SEMVTNATGLEFCFMALAVSRENGWKDLPMELLVKIIAITDDRTAILASGVCTGWRDAIS 6
+EM++ L CF + + WKD+P+ELL++I+ + DDRT I+ASGVC+GWRDAIS
Sbjct: 10 TEMMSEGGSLNLCFKKMEGNMITEWKDIPVELLMRILNLVDDRTVIIASGVCSGWRDAIS 69
>ONK56710.1 uncharacterized protein A4U43_C10F11930 [Asparagus officinalis]
Length = 369
Score = 70.5 bits (171), Expect = 1e-11
Identities = 29/38 (76%), Positives = 37/38 (97%)
Frame = -1
Query: 119 NGWKDLPMELLVKIIAITDDRTAILASGVCTGWRDAIS 6
+GWKDLPMELL++I++++DDRT I+ASGVCTGWRDAIS
Sbjct: 33 SGWKDLPMELLLRIVSLSDDRTVIVASGVCTGWRDAIS 70
>XP_013650075.1 PREDICTED: F-box protein SKP2B isoform X3 [Brassica napus]
Length = 384
Score = 70.5 bits (171), Expect = 2e-11
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -1
Query: 185 SEMVTNATGLEFCFMALAVSRENGWKDLPMELLVKIIAITDDRTAILASGVCTGWRDAIS 6
+EM++ L CF + + WKD+P+ELL++I+ + DDRT I+ASGVC+GWRDAIS
Sbjct: 28 TEMMSEGGSLNLCFKKMEGNMITEWKDIPVELLMRILNLVDDRTVIIASGVCSGWRDAIS 87
>XP_013737910.1 PREDICTED: F-box protein SKP2B-like isoform X2 [Brassica napus]
XP_013672883.1 PREDICTED: F-box protein SKP2B-like
isoform X2 [Brassica napus]
Length = 384
Score = 70.1 bits (170), Expect = 2e-11
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -1
Query: 185 SEMVTNATGLEFCFMALAVSRENGWKDLPMELLVKIIAITDDRTAILASGVCTGWRDAIS 6
+EM++ L CF + + WKD+P+ELL++I+ + DDRT I+ASGVC+GWRDAIS
Sbjct: 28 TEMMSEGGSLNLCFEKMEGNMITEWKDIPVELLMRILNLVDDRTVIIASGVCSGWRDAIS 87
>XP_013669584.1 PREDICTED: F-box protein SKP2B-like [Brassica napus]
Length = 202
Score = 68.2 bits (165), Expect = 2e-11
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = -1
Query: 179 MVTNATGLEFCFMALAVSRENGWKDLPMELLVKIIAITDDRTAILASGVCTGWRDAIS 6
M++ L CF + + WKD+P+ELL++I+ + DDRT I+ASGVC+GWRDAIS
Sbjct: 1 MMSEGGSLNLCFKKMEGNMITEWKDIPVELLMRILNLVDDRTVIIASGVCSGWRDAIS 58
>XP_010260457.1 PREDICTED: F-box protein SKP2A-like isoform X1 [Nelumbo nucifera]
Length = 368
Score = 69.7 bits (169), Expect = 3e-11
Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 11/63 (17%)
Frame = -1
Query: 158 LEFCFMALAV-----------SRENGWKDLPMELLVKIIAITDDRTAILASGVCTGWRDA 12
LE CF L V + GWKDLPMELL++I+++ DDRTAI+A+GVCTGWRD
Sbjct: 11 LELCFQKLLVLGGGGGKMEGGAVMTGWKDLPMELLLRIVSLVDDRTAIVAAGVCTGWRDV 70
Query: 11 ISL 3
I L
Sbjct: 71 ICL 73
>XP_009106367.1 PREDICTED: F-box protein SKP2B-like isoform X1 [Brassica rapa]
Length = 384
Score = 68.9 bits (167), Expect = 5e-11
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -1
Query: 185 SEMVTNATGLEFCFMALAVSRENGWKDLPMELLVKIIAITDDRTAILASGVCTGWRDAIS 6
+EM++ L CF + + WKD+P+ELL++I+ + DDRT I+ASGVC+GWRDAIS
Sbjct: 28 TEMMSEGGSLNRCFEKMEGNMITEWKDIPVELLMRILNLVDDRTVIIASGVCSGWRDAIS 87
>XP_019072288.1 PREDICTED: F-box protein SKP2A isoform X2 [Vitis vinifera]
Length = 272
Score = 68.2 bits (165), Expect = 6e-11
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 13/65 (20%)
Frame = -1
Query: 158 LEFCFMALAVSRENG-------------WKDLPMELLVKIIAITDDRTAILASGVCTGWR 18
LEFCF L + + WKD+PMELL++I+A+ DDRT I+ASGVC+GWR
Sbjct: 11 LEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRTVIMASGVCSGWR 70
Query: 17 DAISL 3
DAI L
Sbjct: 71 DAICL 75
>XP_010260458.1 PREDICTED: F-box protein SKP2A-like isoform X2 [Nelumbo nucifera]
XP_010260459.1 PREDICTED: F-box protein SKP2A-like
isoform X2 [Nelumbo nucifera]
Length = 341
Score = 68.2 bits (165), Expect = 9e-11
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = -1
Query: 116 GWKDLPMELLVKIIAITDDRTAILASGVCTGWRDAISL 3
GWKDLPMELL++I+++ DDRTAI+A+GVCTGWRD I L
Sbjct: 9 GWKDLPMELLLRIVSLVDDRTAIVAAGVCTGWRDVICL 46
>XP_013650072.1 PREDICTED: F-box protein SKP2B isoform X2 [Brassica napus]
XP_013650073.1 PREDICTED: F-box protein SKP2B isoform X2
[Brassica napus] CDX87549.1 BnaA07g33240D [Brassica
napus]
Length = 355
Score = 68.2 bits (165), Expect = 9e-11
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = -1
Query: 179 MVTNATGLEFCFMALAVSRENGWKDLPMELLVKIIAITDDRTAILASGVCTGWRDAIS 6
M++ L CF + + WKD+P+ELL++I+ + DDRT I+ASGVC+GWRDAIS
Sbjct: 1 MMSEGGSLNLCFKKMEGNMITEWKDIPVELLMRILNLVDDRTVIIASGVCSGWRDAIS 58
>XP_019072286.1 PREDICTED: F-box protein SKP2B isoform X1 [Vitis vinifera]
XP_019072287.1 PREDICTED: F-box protein SKP2B isoform X1
[Vitis vinifera]
Length = 370
Score = 68.2 bits (165), Expect = 1e-10
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 13/65 (20%)
Frame = -1
Query: 158 LEFCFMALAVSRENG-------------WKDLPMELLVKIIAITDDRTAILASGVCTGWR 18
LEFCF L + + WKD+PMELL++I+A+ DDRT I+ASGVC+GWR
Sbjct: 11 LEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRTVIMASGVCSGWR 70
Query: 17 DAISL 3
DAI L
Sbjct: 71 DAICL 75
>ONK73271.1 uncharacterized protein A4U43_C04F29200 [Asparagus officinalis]
Length = 372
Score = 68.2 bits (165), Expect = 1e-10
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = -1
Query: 119 NGWKDLPMELLVKIIAITDDRTAILASGVCTGWRDAI 9
NGWKDLPMELL++I+++ DDRT I+ SGVCTGWRDAI
Sbjct: 33 NGWKDLPMELLLRIVSLGDDRTVIVVSGVCTGWRDAI 69
>XP_013737908.1 PREDICTED: F-box protein SKP2B-like isoform X1 [Brassica napus]
XP_013737909.1 PREDICTED: F-box protein SKP2B-like
isoform X1 [Brassica napus] XP_013672881.1 PREDICTED:
F-box protein SKP2B-like isoform X1 [Brassica napus]
XP_013672882.1 PREDICTED: F-box protein SKP2B-like
isoform X1 [Brassica napus]
Length = 355
Score = 67.8 bits (164), Expect = 1e-10
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = -1
Query: 179 MVTNATGLEFCFMALAVSRENGWKDLPMELLVKIIAITDDRTAILASGVCTGWRDAIS 6
M++ L CF + + WKD+P+ELL++I+ + DDRT I+ASGVC+GWRDAIS
Sbjct: 1 MMSEGGSLNLCFEKMEGNMITEWKDIPVELLMRILNLVDDRTVIIASGVCSGWRDAIS 58
>XP_013588567.1 PREDICTED: F-box protein SKP2B-like [Brassica oleracea var.
oleracea]
Length = 355
Score = 67.8 bits (164), Expect = 1e-10
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = -1
Query: 179 MVTNATGLEFCFMALAVSRENGWKDLPMELLVKIIAITDDRTAILASGVCTGWRDAIS 6
M++ L CF + + WKD+P+ELL++I+ + DDRT I+ASGVC+GWRDAIS
Sbjct: 1 MMSEGGSLNLCFEKMEGNMITEWKDIPVELLMRILNLVDDRTVIIASGVCSGWRDAIS 58
>XP_020095504.1 F-box protein SKP2A [Ananas comosus] OAY83252.1 F-box protein SKP2A
[Ananas comosus]
Length = 379
Score = 67.8 bits (164), Expect = 1e-10
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 11/64 (17%)
Frame = -1
Query: 161 GLEFCFMALAVSRENG-----------WKDLPMELLVKIIAITDDRTAILASGVCTGWRD 15
GL+ F L V+ E G WKDLPMELL++I+++ DD+T I+ASGVCTGWRD
Sbjct: 11 GLDVWFKNLMVAGEGGKMERAGPVMAGWKDLPMELLLRIVSLVDDKTVIVASGVCTGWRD 70
Query: 14 AISL 3
A+ L
Sbjct: 71 ALCL 74
>XP_013626492.1 PREDICTED: F-box protein SKP2A-like isoform X2 [Brassica oleracea
var. oleracea]
Length = 127
Score = 64.3 bits (155), Expect = 2e-10
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 6/65 (9%)
Frame = -1
Query: 179 MVTNATGLEF--CFMALAVSREN----GWKDLPMELLVKIIAITDDRTAILASGVCTGWR 18
MV T +E CF ++ E WKD+P+ELL++I+ + DDR I ASGVC+GWR
Sbjct: 3 MVVGETSMELDQCFQMTMMNMEGVSIKEWKDIPVELLMRILPLVDDRNVIAASGVCSGWR 62
Query: 17 DAISL 3
DAISL
Sbjct: 63 DAISL 67
>JAT54287.1 F-box protein SKP2A, partial [Anthurium amnicola]
Length = 337
Score = 67.4 bits (163), Expect = 2e-10
Identities = 27/35 (77%), Positives = 34/35 (97%)
Frame = -1
Query: 113 WKDLPMELLVKIIAITDDRTAILASGVCTGWRDAI 9
WKDLPMELL++I+++TDDRT I+ASGVCTGWRDA+
Sbjct: 37 WKDLPMELLLRIVSLTDDRTVIVASGVCTGWRDAV 71
>XP_013626491.1 PREDICTED: F-box protein SKP2A-like isoform X1 [Brassica oleracea
var. oleracea]
Length = 136
Score = 64.3 bits (155), Expect = 2e-10
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 6/65 (9%)
Frame = -1
Query: 179 MVTNATGLEF--CFMALAVSREN----GWKDLPMELLVKIIAITDDRTAILASGVCTGWR 18
MV T +E CF ++ E WKD+P+ELL++I+ + DDR I ASGVC+GWR
Sbjct: 3 MVVGETSMELDQCFQMTMMNMEGVSIKEWKDIPVELLMRILPLVDDRNVIAASGVCSGWR 62
Query: 17 DAISL 3
DAISL
Sbjct: 63 DAISL 67