BLASTX nr result
ID: Alisma22_contig00027020
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00027020
(421 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAT07563.1 putative polyprotein [Oryza sativa Japonica Group] AA... 89 6e-29
ABF95616.1 retrotransposon protein, putative, Ty1-copia subclass... 90 4e-28
AAK09230.1 putative copia-like retrotransposon Hopscotch polypro... 86 5e-28
AAK55460.1 putative gag-pol polyprotein [Oryza sativa Japonica G... 89 5e-28
ABA97008.1 retrotransposon protein, putative, Ty1-copia subclass... 89 7e-28
EEC80484.1 hypothetical protein OsI_22718 [Oryza sativa Indica G... 89 9e-28
XP_015619124.1 PREDICTED: uncharacterized protein LOC107279618 [... 94 2e-27
ABA95367.1 retrotransposon protein, putative, Ty1-copia subclass... 95 2e-27
BAG98101.1 unnamed protein product [Oryza sativa Japonica Group]... 94 3e-26
EEE57553.1 hypothetical protein OsJ_07890 [Oryza sativa Japonica... 94 3e-26
AAV44026.1 hypothetical protein [Oryza sativa Japonica Group] 91 4e-26
AAU90262.1 integrase core domain containing protein [Oryza sativ... 86 8e-26
ABG00000.1 retrotransposon protein, putative, Ty1-copia subclass... 81 3e-25
ABA97279.2 retrotransposon protein, putative, Ty1-copia subclass... 87 3e-25
BAB90546.1 putative rice retrotransposon retrofit gag/pol polypr... 88 4e-25
ACV42639.1 gag/pol [Oryza sativa Japonica Group] 88 4e-25
AAB82754.1 retrofit [Oryza longistaminata] 88 4e-25
ACY72569.1 unknown [Oryza sativa Japonica Group] 89 7e-25
ABA98286.2 retrotransposon protein, putative, Ty1-copia subclass... 86 2e-24
ABA98049.1 retrotransposon protein, putative, Ty1-copia subclass... 86 2e-24
>AAT07563.1 putative polyprotein [Oryza sativa Japonica Group] AAT07631.1
putative polyprotein [Oryza sativa Japonica Group]
Length = 1431
Score = 89.4 bits (220), Expect(2) = 6e-29
Identities = 42/76 (55%), Positives = 55/76 (72%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K G+VA C+HR+D SY +E AAT + GVDTNWY D+GATDHIT +LDK+
Sbjct: 273 QVCHKRGHVASDCWHRYDDSYVPDEK--LGGAATYAYGVDTNWYVDTGATDHITGQLDKL 330
Query: 239 TVQEKYQGKDQVQTGA 192
T +E+Y+G DQ+ T +
Sbjct: 331 TTKERYKGTDQIHTAS 346
Score = 65.5 bits (158), Expect(2) = 6e-29
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I H+G +P SH L+LKN+LHVP A +NL+S+HKL DN AF+E H YF
Sbjct: 352 IKHVGHAIVPTPSHPLHLKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYF 403
>ABF95616.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 89.7 bits (221), Expect(2) = 4e-28
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K G+VA +C+HR+D +Y +E AA AA G+DTNWY D+GATDHIT ELDK+
Sbjct: 271 QVCLKRGHVAAECWHRYDETYVPDERSAAAAAAY---GIDTNWYLDTGATDHITNELDKL 327
Query: 239 TVQEKYQGKDQVQTGA 192
V+EKY+G D++ T +
Sbjct: 328 DVREKYKGGDKIHTAS 343
Score = 62.4 bits (150), Expect(2) = 4e-28
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I H+G + I + L+LKNILHVP A +NLIS H+LAMDN AF+E H YF
Sbjct: 349 IKHIGDSVIHTPTRELHLKNILHVPQAKKNLISAHRLAMDNFAFLEVHSNYF 400
>AAK09230.1 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group] AAK72882.1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 85.9 bits (211), Expect(2) = 5e-28
Identities = 40/76 (52%), Positives = 53/76 (69%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K G+V C+HR+D +Y +E AAT + GVDTNWY D+ ATDHIT +LDK+
Sbjct: 274 QVCHKKGHVVADCWHRYDENYVPDEK--LGGAATHAYGVDTNWYVDTEATDHITGQLDKL 331
Query: 239 TVQEKYQGKDQVQTGA 192
T +EKY+G DQ+ T +
Sbjct: 332 TTREKYKGTDQIHTAS 347
Score = 65.9 bits (159), Expect(2) = 5e-28
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I H+G +++P S L+LKNILHVP A +NLIS+H+L DN AF+E H YF
Sbjct: 353 IQHIGHSYVPTSSRPLHLKNILHVPKASKNLISVHRLVADNYAFLEIHQKYF 404
>AAK55460.1 putative gag-pol polyprotein [Oryza sativa Japonica Group]
AAP54977.1 retrotransposon protein, putative, Ty1-copia
subclass [Oryza sativa Japonica Group]
Length = 1031
Score = 89.4 bits (220), Expect(2) = 5e-28
Identities = 42/76 (55%), Positives = 55/76 (72%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K G+VA C+HR+D SY +E AAT + GVDTNWY D+GATDHIT +LDK+
Sbjct: 282 QVCHKRGHVASDCWHRYDDSYVPDEK--LGGAATYAYGVDTNWYVDTGATDHITGQLDKL 339
Query: 239 TVQEKYQGKDQVQTGA 192
T +E+Y+G DQ+ T +
Sbjct: 340 TTKERYKGTDQIHTAS 355
Score = 62.4 bits (150), Expect(2) = 5e-28
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I H+G +P S L+LKN+LHVP A +NL+S+HKL DN AF+E H YF
Sbjct: 361 IKHVGHAIVPTPSRPLHLKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYF 412
>ABA97008.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 89.0 bits (219), Expect(2) = 7e-28
Identities = 41/76 (53%), Positives = 55/76 (72%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K G+VA C+HR+D SY +E AAT + G+DTNWY D+GATDHIT +LDK+
Sbjct: 282 QVCHKRGHVASDCWHRYDDSYVPDEK--LGGAATYAYGIDTNWYVDTGATDHITGQLDKL 339
Query: 239 TVQEKYQGKDQVQTGA 192
T +E+Y+G DQ+ T +
Sbjct: 340 TTKERYKGTDQIHTAS 355
Score = 62.4 bits (150), Expect(2) = 7e-28
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I H+G +P S L+LKN+LHVP A +NL+S+HKL DN AF+E H YF
Sbjct: 361 IKHVGHAIVPTPSRPLHLKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYF 412
>EEC80484.1 hypothetical protein OsI_22718 [Oryza sativa Indica Group]
Length = 506
Score = 88.6 bits (218), Expect(2) = 9e-28
Identities = 42/76 (55%), Positives = 55/76 (72%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K G+VA +C+HR+D +Y +E AA AA G+DTNWY D+GATDHIT ELDK+
Sbjct: 271 QVCLKRGHVAAECWHRYDETYVPDERSAAAAAAY---GIDTNWYLDTGATDHITNELDKL 327
Query: 239 TVQEKYQGKDQVQTGA 192
V EKY+G D++ T +
Sbjct: 328 DVWEKYKGGDKIHTAS 343
Score = 62.4 bits (150), Expect(2) = 9e-28
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I H+G + I + L+LKNILHVP A +NLIS H+LAMDN AF+E H YF
Sbjct: 349 IKHIGDSVIHTPTRELHLKNILHVPQAKKNLISAHRLAMDNFAFLEVHSNYF 400
>XP_015619124.1 PREDICTED: uncharacterized protein LOC107279618 [Oryza sativa
Japonica Group] ABA95720.1 retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 358
Score = 94.0 bits (232), Expect(2) = 2e-27
Identities = 46/78 (58%), Positives = 56/78 (71%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
Q+C K G+ KC+ RFD SY EE +AA AT S GVDTNWY D+GATDHIT EL+K+
Sbjct: 224 QLCGKIGHTVVKCWKRFDTSYSGEEKSVAA--ATNSYGVDTNWYIDTGATDHITGELEKL 281
Query: 239 TVQEKYQGKDQVQTGANT 186
TV++KY G DQV T + T
Sbjct: 282 TVRDKYTGGDQVHTASGT 299
Score = 55.8 bits (133), Expect(2) = 2e-27
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = -1
Query: 184 HLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
H+G+T I + L+N+LHVP A ++L+S H L DN+AF+E HP++F
Sbjct: 305 HVGRTVIRTPVRDVVLRNVLHVPDAQKSLVSAHHLTKDNHAFMEVHPFFF 354
>ABA95367.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 94.7 bits (234), Expect(3) = 2e-27
Identities = 45/74 (60%), Positives = 57/74 (77%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K G+VA KC+HRFD +Y +E +AA AA + VDTNWY DSGATDHIT ELDK+
Sbjct: 249 QVCYKRGHVAAKCWHRFDENYVPDERHVAA-AAQAAYAVDTNWYIDSGATDHITSELDKL 307
Query: 239 TVQEKYQGKDQVQT 198
TV+EKY+G +++ T
Sbjct: 308 TVREKYKGTEKIHT 321
Score = 52.8 bits (125), Expect(3) = 2e-27
Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = -1
Query: 190 ILHLGKT--HIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I H+G H P +H L+LKN+LHVP A +NLIS +LA DN F+E H YF
Sbjct: 329 IKHIGHALVHTPD-NHTLHLKNVLHVPHATKNLISASRLAEDNYVFLEIHSKYF 381
Score = 22.3 bits (46), Expect(3) = 2e-27
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2
Query: 36 FLIKDRAMKKIL 1
FL+KDRAM+ I+
Sbjct: 381 FLVKDRAMRNII 392
>BAG98101.1 unnamed protein product [Oryza sativa Japonica Group] BAS80237.1
Os02g0671800 [Oryza sativa Japonica Group]
Length = 572
Score = 93.6 bits (231), Expect(2) = 3e-26
Identities = 45/78 (57%), Positives = 55/78 (70%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
Q+C K G+ KCY RFD S+ EE +A AAT S GV TNWY D+GATDHIT +LDK+
Sbjct: 228 QLCDKLGHTVVKCYKRFDASFTGEEK--SAAAATSSYGVGTNWYIDTGATDHITSDLDKL 285
Query: 239 TVQEKYQGKDQVQTGANT 186
TV+EKY G DQV T + +
Sbjct: 286 TVREKYNGGDQVHTASGS 303
Score = 52.4 bits (124), Expect(2) = 3e-26
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I +G++ + L LKNIL+VP A+++LIS H+LA DN AF+E P YF
Sbjct: 307 INQIGQSIVRTQHRDLILKNILYVPEANKSLISAHRLAFDNQAFLELFPRYF 358
>EEE57553.1 hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
Length = 499
Score = 93.6 bits (231), Expect(2) = 3e-26
Identities = 45/78 (57%), Positives = 55/78 (70%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
Q+C K G+ KCY RFD S+ EE +A AAT S GV TNWY D+GATDHIT +LDK+
Sbjct: 155 QLCDKLGHTVVKCYKRFDASFTGEEK--SAAAATSSYGVGTNWYIDTGATDHITSDLDKL 212
Query: 239 TVQEKYQGKDQVQTGANT 186
TV+EKY G DQV T + +
Sbjct: 213 TVREKYNGGDQVHTASGS 230
Score = 52.4 bits (124), Expect(2) = 3e-26
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I +G++ + L LKNIL+VP A+++LIS H+LA DN AF+E P YF
Sbjct: 234 INQIGQSIVRTQHRDLILKNILYVPEANKSLISAHRLAFDNQAFLELFPRYF 285
>AAV44026.1 hypothetical protein [Oryza sativa Japonica Group]
Length = 760
Score = 90.9 bits (224), Expect(2) = 4e-26
Identities = 44/78 (56%), Positives = 53/78 (67%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
Q+C K G+ KCY RFD S+ EE AA AT S G+DTNWY D+GATDHIT ELDK+
Sbjct: 202 QLCGKLGHTVIKCYKRFDTSFTGEEK--AANTATTSYGIDTNWYVDTGATDHITGELDKL 259
Query: 239 TVQEKYQGKDQVQTGANT 186
TV++KY G +QV T
Sbjct: 260 TVRDKYTGNEQVHAANGT 277
Score = 54.7 bits (130), Expect(2) = 4e-26
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I H+ +P S +L LKN+L+VP A ++L+S +LA DN+AF+E HP +F
Sbjct: 281 ISHIDHATVPISSGNLVLKNVLYVPEATKSLVSASRLAFDNDAFVELHPNHF 332
>AAU90262.1 integrase core domain containing protein [Oryza sativa Japonica
Group] ABF97857.1 retrotransposon protein, putative,
Ty1-copia subclass, expressed [Oryza sativa Japonica
Group]
Length = 1021
Score = 85.9 bits (211), Expect(2) = 8e-26
Identities = 41/75 (54%), Positives = 55/75 (73%)
Frame = -3
Query: 416 VCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKMT 237
+C K G+V C++R+D ++ EN++AA A S GVDTNWY D+GATDHIT ELDK+T
Sbjct: 279 LCGKTGHVVADCWYRYDENF-VPENKIAAAA---SYGVDTNWYVDTGATDHITGELDKLT 334
Query: 236 VQEKYQGKDQVQTGA 192
+EKY GKDQ+ T +
Sbjct: 335 TREKYNGKDQIYTAS 349
Score = 58.5 bits (140), Expect(2) = 8e-26
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYFF--NQGSS 17
I H+G + I + ++ LKNILHVP A +NL+ H+LA+DN+AF+E H +F +Q S
Sbjct: 355 IKHIGHSVICTPTRNIYLKNILHVPKAKKNLLFAHRLALDNHAFVEVHSRFFAIKDQAKS 414
Query: 16 HE 11
H+
Sbjct: 415 HQ 416
>ABG00000.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 81.3 bits (199), Expect(2) = 3e-25
Identities = 38/76 (50%), Positives = 51/76 (67%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
Q+C K G+V C++R+D ++ + AA S GVDTNWY D+GATDHIT ELDK+
Sbjct: 1243 QLCGKIGHVVADCWYRYDENFIPDSK----TAAAASYGVDTNWYMDTGATDHITGELDKL 1298
Query: 239 TVQEKYQGKDQVQTGA 192
T EKY GK+Q+ T +
Sbjct: 1299 TTHEKYNGKEQIHTAS 1314
Score = 61.2 bits (147), Expect(2) = 3e-25
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I H+G + I ++ LKNILHVP A +NLIS H+LA+DN+AF+E HP +F
Sbjct: 1320 IKHVGHSIIHTPICNIQLKNILHVPKAEKNLISAHRLAVDNHAFVEVHPRFF 1371
>ABA97279.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 297
Score = 87.4 bits (215), Expect(2) = 3e-25
Identities = 42/78 (53%), Positives = 55/78 (70%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K GY+A C++R+D Y + +AA AAT S GVD NWY D+GATDHI ELDK+
Sbjct: 123 QVCFKRGYMATDCWYRYDEDYVPDPKYIAA-AATSSYGVDANWYIDTGATDHIIGELDKL 181
Query: 239 TVQEKYQGKDQVQTGANT 186
TV+EKY G +++ T + T
Sbjct: 182 TVKEKYNGGERIHTASGT 199
Score = 55.1 bits (131), Expect(2) = 3e-25
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYFF 32
I H+G T + + +++LK +L+VP ++LIS+H+L DN+AF+E H YFF
Sbjct: 203 ISHIGHTTVHTPNRNIHLKKVLYVPQTKKSLISVHRLVDDNSAFLELHRNYFF 255
>BAB90546.1 putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 88.2 bits (217), Expect(2) = 4e-25
Identities = 42/76 (55%), Positives = 55/76 (72%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K G+ A C++RFD Y A+E +AA AT S G+DTNWY D+GATDHIT EL+K+
Sbjct: 285 QVCFKRGHTAADCWYRFDEDYVADEKLVAA--ATNSYGIDTNWYIDTGATDHITGELEKL 342
Query: 239 TVQEKYQGKDQVQTGA 192
T +EKY G +Q+ T +
Sbjct: 343 TTKEKYNGGEQIHTAS 358
Score = 53.9 bits (128), Expect(2) = 4e-25
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I H+G T + S +++L N+L+VP A +NLIS +LA DN+AF+E H +F
Sbjct: 364 ISHIGHTIVHTPSRNIHLNNVLYVPQAKKNLISASQLAADNSAFLELHSKFF 415
>ACV42639.1 gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 88.2 bits (217), Expect(2) = 4e-25
Identities = 42/76 (55%), Positives = 55/76 (72%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K G+ A C++RFD Y A+E +AA AT S G+DTNWY D+GATDHIT EL+K+
Sbjct: 285 QVCFKRGHTAADCWYRFDEDYVADEKLVAA--ATNSYGIDTNWYIDTGATDHITGELEKL 342
Query: 239 TVQEKYQGKDQVQTGA 192
T +EKY G +Q+ T +
Sbjct: 343 TTKEKYNGGEQIHTAS 358
Score = 53.9 bits (128), Expect(2) = 4e-25
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I H+G T + S +++L N+L+VP A +NLIS +LA DN+AF+E H +F
Sbjct: 364 ISHIGHTIVHTPSRNIHLNNVLYVPQAKKNLISASQLAADNSAFLELHSKFF 415
>AAB82754.1 retrofit [Oryza longistaminata]
Length = 1445
Score = 88.2 bits (217), Expect(2) = 4e-25
Identities = 42/76 (55%), Positives = 55/76 (72%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K G+ A C++RFD Y A+E +AA AT S G+DTNWY D+GATDHIT EL+K+
Sbjct: 281 QVCFKRGHTAADCWYRFDEDYVADEKLVAA--ATNSYGIDTNWYIDTGATDHITGELEKL 338
Query: 239 TVQEKYQGKDQVQTGA 192
T +EKY G +Q+ T +
Sbjct: 339 TTKEKYNGGEQIHTAS 354
Score = 53.9 bits (128), Expect(2) = 4e-25
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I H+G T + S +++L N+L+VP A +NLIS +LA DN+AF+E H +F
Sbjct: 360 ISHIGHTIVHTPSRNIHLNNVLYVPQAKKNLISASQLAADNSAFLELHSKFF 411
>ACY72569.1 unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 89.0 bits (219), Expect(2) = 7e-25
Identities = 42/76 (55%), Positives = 54/76 (71%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K G+ A C++RFD Y A+E A AAT S G+DTNWY D+GATDHIT EL+K+
Sbjct: 282 QVCFKRGHTAADCWYRFDEDYVADEK--LAAAATNSYGIDTNWYIDTGATDHITGELEKL 339
Query: 239 TVQEKYQGKDQVQTGA 192
T +EKY G +Q+ T +
Sbjct: 340 TTKEKYNGNEQIHTAS 355
Score = 52.4 bits (124), Expect(2) = 7e-25
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = -1
Query: 190 ILHLGKTHIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYF 35
I H+G T + S +++L N+L+VP A ++LIS +LA DN+AF+E H +F
Sbjct: 361 ISHIGHTTVHTPSRNIHLNNVLYVPQAKKSLISASQLATDNSAFLELHSKFF 412
>ABA98286.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 85.5 bits (210), Expect(2) = 2e-24
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K G+ A C++R+D Y + +AA AA S GVDTNWY D+GATDH+T ELDK+
Sbjct: 395 QVCFKRGHTAADCWYRYDEDYVPDAKHVAA-AAVNSYGVDTNWYIDTGATDHVTGELDKL 453
Query: 239 TVQEKYQGKDQVQTGA 192
T++EKY G +Q+ T +
Sbjct: 454 TMKEKYNGGEQIHTAS 469
Score = 54.3 bits (129), Expect(2) = 2e-24
Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Frame = -1
Query: 190 ILHLGKT--HIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYFF 32
I H+G H P S +++L+N+L+VP A +NL+S+H+L DN+AF+E H YFF
Sbjct: 475 ISHIGHAIVHNPN-SRNIHLRNVLYVPQAKKNLVSVHRLVNDNSAFLELHRDYFF 528
>ABA98049.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 85.5 bits (210), Expect(2) = 2e-24
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = -3
Query: 419 QVCQKPGYVA*KCYHRFDLSYQAEENRLAAVAATPSCGVDTNWYTDSGATDHITVELDKM 240
QVC K G+ A C++R+D Y + +AA AA S GVDTNWY D+GATDH+T ELDK+
Sbjct: 279 QVCFKRGHTAADCWYRYDEDYVPDAKHVAA-AAVNSYGVDTNWYIDTGATDHVTGELDKL 337
Query: 239 TVQEKYQGKDQVQTGA 192
T++EKY G +Q+ T +
Sbjct: 338 TMKEKYNGGEQIHTAS 353
Score = 54.3 bits (129), Expect(2) = 2e-24
Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Frame = -1
Query: 190 ILHLGKT--HIPAISHHLNLKNILHVPSAHRNLISLHKLAMDNNAFIEFHPYYFF 32
I H+G H P S +++L+N+L+VP A +NL+S+H+L DN+AF+E H YFF
Sbjct: 359 ISHIGHAIVHNPN-SRNIHLRNVLYVPQAKKNLVSVHRLVNDNSAFLELHRDYFF 412