BLASTX nr result
ID: Alisma22_contig00026287
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00026287
(311 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP_001150785.1 UBiQuitin family member [Zea mays] ACG40371.1 UBi... 88 5e-20
XP_002462809.1 hypothetical protein SORBIDRAFT_02g032360 [Sorghu... 82 1e-17
XP_004957594.1 PREDICTED: ubiquitin-like [Setaria italica] KQL25... 80 5e-17
CBL53160.1 ubiquitin [Psammechinus miliaris] 79 7e-17
XP_010233081.2 PREDICTED: ubiquitin-like [Brachypodium distachyo... 79 9e-17
AGO58887.1 60S ribosomal protein L40, partial [Carassius auratus] 77 2e-16
3J3B_MM Chain m, Structure Of The Human 60s Ribosomal Proteins A... 76 2e-16
EDL16044.1 mCG13235 [Mus musculus] 78 2e-16
3J61_MM Chain m, Localization Of The Large Subunit Ribosomal Pro... 76 2e-16
AAA56987.1 ubiquitin [synthetic construct] 76 2e-16
XP_009880925.1 PREDICTED: ubiquitin-60S ribosomal protein L40, p... 76 3e-16
P62985.2 RecName: Full=Ubiquitin-60S ribosomal protein L40; AltN... 76 3e-16
KGL86306.1 Ubiquitin-60S ribosomal protein L40, partial [Charadr... 76 3e-16
XP_016048116.1 PREDICTED: ubiquitin-60S ribosomal protein L40 is... 77 4e-16
ELK19195.1 60S ribosomal protein L40 [Pteropus alecto] 76 4e-16
XP_016408481.1 PREDICTED: ubiquitin-60S ribosomal protein L40, p... 77 4e-16
XP_007236014.2 PREDICTED: ubiquitin-60S ribosomal protein L40, p... 77 4e-16
XP_005029159.1 PREDICTED: ubiquitin-60S ribosomal protein L40, p... 76 5e-16
EOA94618.1 60S ribosomal protein L40, partial [Anas platyrhynchos] 76 5e-16
XP_011661735.1 PREDICTED: ubiquitin isoform X1 [Strongylocentrot... 77 5e-16
>NP_001150785.1 UBiQuitin family member [Zea mays] ACG40371.1 UBiQuitin family
member [Zea mays]
Length = 144
Score = 87.8 bits (216), Expect = 5e-20
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +1
Query: 46 PPSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKKPFLSKFG 207
PPSLRELAQK+ E K +CR CYAR PRA NCRK+KCGHS+ELR KK F+SK G
Sbjct: 89 PPSLRELAQKYNENKMVCRKCYARLPPRATNCRKKKCGHSNELRSKKRFMSKIG 142
>XP_002462809.1 hypothetical protein SORBIDRAFT_02g032360 [Sorghum bicolor]
EER99330.1 hypothetical protein SORBI_002G292500
[Sorghum bicolor]
Length = 143
Score = 81.6 bits (200), Expect = 1e-17
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKKPFLSKFG 207
PSLRELAQK+ E K +CR CYAR PRA NCRK+KCGH++ LR KK F+SK G
Sbjct: 87 PSLRELAQKYNENKMVCRKCYARLPPRATNCRKKKCGHTNALRSKKRFMSKIG 139
>XP_004957594.1 PREDICTED: ubiquitin-like [Setaria italica] KQL25646.1 hypothetical
protein SETIT_031449mg [Setaria italica]
Length = 141
Score = 80.1 bits (196), Expect = 5e-17
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKKPFLSKFG 207
PSLRELAQK+ E K++CR CYAR RA NCRK+KCGH++ELR KK F+SK G
Sbjct: 87 PSLRELAQKYNENKRVCRKCYARLPLRATNCRKKKCGHTNELRSKKRFMSKNG 139
>CBL53160.1 ubiquitin [Psammechinus miliaris]
Length = 128
Score = 79.3 bits (194), Expect = 7e-17
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR LAQK+ + K+ICR CYAR HPRA NCRK+KCGHS++LRPKK
Sbjct: 80 PSLRILAQKYNQDKQICRKCYARLHPRATNCRKKKCGHSNDLRPKK 125
>XP_010233081.2 PREDICTED: ubiquitin-like [Brachypodium distachyon] KQK04204.1
hypothetical protein BRADI_2g12326 [Brachypodium
distachyon]
Length = 142
Score = 79.3 bits (194), Expect = 9e-17
Identities = 36/57 (63%), Positives = 44/57 (77%)
Frame = +1
Query: 40 NYPPSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKKPFLSKFGS 210
N P+LR LAQK+ E K +CR CYAR RA +CRK+KCGHS++LR KK F+SKFGS
Sbjct: 84 NLEPNLRILAQKYNENKMVCRKCYARLPLRATHCRKKKCGHSNQLREKKRFMSKFGS 140
>AGO58887.1 60S ribosomal protein L40, partial [Carassius auratus]
Length = 72
Score = 76.6 bits (187), Expect = 2e-16
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR+LAQK+ +K ICR CYAR HPRA NCRK+KCGH++ LRPKK
Sbjct: 24 PSLRQLAQKYNCEKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK 69
>3J3B_MM Chain m, Structure Of The Human 60s Ribosomal Proteins AAC52495.1
ubiquitin/60S ribosomal subunit protein, partial [Rattus
norvegicus] prf||2210249A ubiquitin fusion protein
Length = 52
Score = 75.9 bits (185), Expect = 2e-16
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR+LAQK+ K ICR CYAR HPRA NCRK+KCGH++ LRPKK
Sbjct: 4 PSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK 49
>EDL16044.1 mCG13235 [Mus musculus]
Length = 134
Score = 78.2 bits (191), Expect = 2e-16
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR+LAQK+ K ICR CYAR HPRA NCRKRKCGHS+ LRPKK
Sbjct: 86 PSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKRKCGHSNNLRPKK 131
>3J61_MM Chain m, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome
Length = 53
Score = 75.9 bits (185), Expect = 2e-16
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSL+ LA+K+ + K ICR CYAR HPRA NCRK+KCGHS++LRPKK
Sbjct: 4 PSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 49
>AAA56987.1 ubiquitin [synthetic construct]
Length = 53
Score = 75.9 bits (185), Expect = 2e-16
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR+LAQK+ K ICR CYAR HPRA NCRK+KCGH++ LRPKK
Sbjct: 5 PSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK 50
>XP_009880925.1 PREDICTED: ubiquitin-60S ribosomal protein L40, partial [Charadrius
vociferus]
Length = 68
Score = 75.9 bits (185), Expect = 3e-16
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR+LAQK+ K ICR CYAR HPRA NCRK+KCGH++ LRPKK
Sbjct: 20 PSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK 65
>P62985.2 RecName: Full=Ubiquitin-60S ribosomal protein L40; AltName:
Full=Ubiquitin A-52 residue ribosomal protein fusion
product 1; Contains: RecName: Full=Ubiquitin; Contains:
RecName: Full=60S ribosomal protein L40; AltName:
Full=CEP52; Flags: Precursor CAA31848.1 ubiquitin-fusion
protein (69 AA), partial [Gallus gallus]
Length = 69
Score = 75.9 bits (185), Expect = 3e-16
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR+LAQK+ K ICR CYAR HPRA NCRK+KCGH++ LRPKK
Sbjct: 21 PSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK 66
>KGL86306.1 Ubiquitin-60S ribosomal protein L40, partial [Charadrius vociferus]
Length = 70
Score = 75.9 bits (185), Expect = 3e-16
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR+LAQK+ K ICR CYAR HPRA NCRK+KCGH++ LRPKK
Sbjct: 22 PSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK 67
>XP_016048116.1 PREDICTED: ubiquitin-60S ribosomal protein L40 isoform X2
[Erinaceus europaeus]
Length = 99
Score = 76.6 bits (187), Expect = 4e-16
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR+LAQK+ +K ICR CYAR HPRA NCRK+KCGH++ LRPKK
Sbjct: 51 PSLRQLAQKYNCEKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK 96
>ELK19195.1 60S ribosomal protein L40 [Pteropus alecto]
Length = 74
Score = 75.9 bits (185), Expect = 4e-16
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR+LAQK+ K ICR CYAR HPRA NCRK+KCGH++ LRPKK
Sbjct: 26 PSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK 71
>XP_016408481.1 PREDICTED: ubiquitin-60S ribosomal protein L40, partial
[Sinocyclocheilus rhinocerous]
Length = 103
Score = 76.6 bits (187), Expect = 4e-16
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR+LAQK+ +K ICR CYAR HPRA NCRK+KCGH++ LRPKK
Sbjct: 55 PSLRQLAQKYNCEKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK 100
>XP_007236014.2 PREDICTED: ubiquitin-60S ribosomal protein L40, partial [Astyanax
mexicanus]
Length = 103
Score = 76.6 bits (187), Expect = 4e-16
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR+LAQK+ +K ICR CYAR HPRA NCRK+KCGH++ LRPKK
Sbjct: 55 PSLRQLAQKYNCEKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK 100
>XP_005029159.1 PREDICTED: ubiquitin-60S ribosomal protein L40, partial [Anas
platyrhynchos]
Length = 82
Score = 75.9 bits (185), Expect = 5e-16
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR+LAQK+ K ICR CYAR HPRA NCRK+KCGH++ LRPKK
Sbjct: 34 PSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK 79
>EOA94618.1 60S ribosomal protein L40, partial [Anas platyrhynchos]
Length = 83
Score = 75.9 bits (185), Expect = 5e-16
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR+LAQK+ K ICR CYAR HPRA NCRK+KCGH++ LRPKK
Sbjct: 35 PSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK 80
>XP_011661735.1 PREDICTED: ubiquitin isoform X1 [Strongylocentrotus purpuratus]
Length = 128
Score = 77.0 bits (188), Expect = 5e-16
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = +1
Query: 49 PSLRELAQKFREKKKICRVCYARNHPRAENCRKRKCGHSSELRPKK 186
PSLR LAQK+ K+ICR CYAR HPRA NCRK+KCGHS++LRPKK
Sbjct: 80 PSLRLLAQKYNCDKQICRKCYARLHPRATNCRKKKCGHSNDLRPKK 125