BLASTX nr result

ID: Alisma22_contig00024161 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00024161
         (376 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP54686.1 Retrovirus-related Pol polyprotein from transposon TN...   179   2e-53
KYP54694.1 Retrovirus-related Pol polyprotein from transposon TN...   177   1e-52
KYP57127.1 Retrovirus-related Pol polyprotein from transposon TN...   176   2e-52
KYP48238.1 Retrovirus-related Pol polyprotein from transposon TN...   174   3e-52
KYP56020.1 Retrovirus-related Pol polyprotein from transposon TN...   168   2e-50
KYP74059.1 Retrovirus-related Pol polyprotein from transposon TN...   175   2e-50
KYP53960.1 Retrovirus-related Pol polyprotein from transposon TN...   169   2e-48
KYP60252.1 Retrovirus-related Pol polyprotein from transposon TN...   162   7e-48
KYP59243.1 Copia protein [Cajanus cajan]                              167   8e-48
KYP32635.1 Retrovirus-related Pol polyprotein from transposon TN...   165   1e-47
KYP58030.1 Retrovirus-related Pol polyprotein from transposon TN...   166   5e-47
KYP78651.1 Retrovirus-related Pol polyprotein from transposon TN...   162   9e-47
KYP30912.1 Retrovirus-related Pol polyprotein from transposon TN...   169   9e-47
ABD32582.1 Integrase, catalytic region; Zinc finger, CCHC-type; ...   170   1e-46
CAN64243.1 hypothetical protein VITISV_038459 [Vitis vinifera]        166   1e-46
KYP59259.1 Retrovirus-related Pol polyprotein from transposon TN...   162   2e-46
CAN74951.1 hypothetical protein VITISV_030567, partial [Vitis vi...   169   3e-46
KYP31061.1 Retrovirus-related Pol polyprotein from transposon TN...   163   3e-46
KYP79135.1 Retrovirus-related Pol polyprotein from transposon TN...   160   3e-46
KYP46043.1 Retrovirus-related Pol polyprotein from transposon TN...   157   5e-46

>KYP54686.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan] KYP54690.1 Retrovirus-related
           Pol polyprotein from transposon TNT 1-94, partial
           [Cajanus cajan]
          Length = 319

 Score =  179 bits (453), Expect = 2e-53
 Identities = 79/122 (64%), Positives = 98/122 (80%)
 Frame = +3

Query: 9   KSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQQ 188
           K ++  VF  FCK+V+NE    I SIRSDHGGEFEN+ F+ FCE++G  HNFS+PRT Q+
Sbjct: 101 KDESFKVFYVFCKKVQNEKGISIASIRSDHGGEFENEQFQDFCEENGIKHNFSTPRTLQE 160

Query: 189 NGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRGR 368
           NGVVERKNRSLQEMART+L ++  PK FWAEAV+TSC++QNR++  P  KKTPYELW+GR
Sbjct: 161 NGVVERKNRSLQEMARTLLNDFSNPKHFWAEAVNTSCYIQNRIYIRPILKKTPYELWKGR 220

Query: 369 KP 374
            P
Sbjct: 221 AP 222


>KYP54694.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 319

 Score =  177 bits (448), Expect = 1e-52
 Identities = 78/120 (65%), Positives = 97/120 (80%)
 Frame = +3

Query: 15  DTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQQNG 194
           ++  VF  FCK+V+NE    I SIRSDHGGEFEN+ F+ FCE++G  HNFS+PRT Q+NG
Sbjct: 103 ESFKVFYVFCKKVQNEKGISIASIRSDHGGEFENEQFQDFCEENGIKHNFSTPRTLQENG 162

Query: 195 VVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRGRKP 374
           VVERKNRSLQEMART+L ++  PK FWAEAV+TSC++QNR++  P  KKTPYELW+GR P
Sbjct: 163 VVERKNRSLQEMARTLLNDFSNPKHFWAEAVNTSCYIQNRIYIRPILKKTPYELWKGRAP 222


>KYP57127.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 319

 Score =  176 bits (446), Expect = 2e-52
 Identities = 78/122 (63%), Positives = 99/122 (81%)
 Frame = +3

Query: 9   KSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQQ 188
           K ++  VF  FCKRV+NE    I SIRSDH GEFEN+ F+ FCE++G  HNFS+PRTPQ+
Sbjct: 68  KDESFKVFYVFCKRVQNEKGISIASIRSDHEGEFENEQFQEFCEENGIKHNFSTPRTPQK 127

Query: 189 NGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRGR 368
           NGVVERKNRSLQEMA+T+L ++ TPK F A+AV+TSC++QNR++  P  KKTPYELW+GR
Sbjct: 128 NGVVERKNRSLQEMAKTLLNDFSTPKHFLAKAVNTSCYIQNRIYIRPILKKTPYELWKGR 187

Query: 369 KP 374
           +P
Sbjct: 188 EP 189


>KYP48238.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 250

 Score =  174 bits (440), Expect = 3e-52
 Identities = 79/123 (64%), Positives = 96/123 (78%), Gaps = 1/123 (0%)
 Frame = +3

Query: 9   KSDTLDVFSSFCKRVENEASCQIVSIRSDHGG-EFENDLFERFCEKSGYSHNFSSPRTPQ 185
           K ++  VF  FCKRV+NE    I  IRSDHGG EFE + F+ FCE++G  HNFS+PRTPQ
Sbjct: 103 KDESFKVFHVFCKRVQNEKGISIAFIRSDHGGGEFEKEQFQEFCEENGIKHNFSTPRTPQ 162

Query: 186 QNGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRG 365
           QNGVVERKNRSL+EMART+L ++ TPK  W EAV+TSC+VQNR++  P  KKTPYELW+G
Sbjct: 163 QNGVVERKNRSLKEMARTLLNDFSTPKHLWVEAVNTSCYVQNRIYIRPLLKKTPYELWKG 222

Query: 366 RKP 374
           R P
Sbjct: 223 RAP 225


>KYP56020.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 222

 Score =  168 bits (426), Expect = 2e-50
 Identities = 76/122 (62%), Positives = 94/122 (77%)
 Frame = +3

Query: 9   KSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQQ 188
           K ++  VF  FCKRV+NE    I SIRS+HGGEFEN+ F+ FCE +G +HNFS+PRTPQQ
Sbjct: 16  KDESFRVFHVFCKRVQNEKGISIASIRSNHGGEFENEQFQEFCEDNGITHNFSTPRTPQQ 75

Query: 189 NGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRGR 368
           NGVVERKN SLQEM R +L ++ TPK FWAEAV+TSC++QNR++  P  KK  YEL +GR
Sbjct: 76  NGVVERKNHSLQEMERNLLNDFSTPKHFWAEAVNTSCYIQNRIYIRPLLKKPLYELGKGR 135

Query: 369 KP 374
            P
Sbjct: 136 AP 137


>KYP74059.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 470

 Score =  175 bits (443), Expect = 2e-50
 Identities = 79/122 (64%), Positives = 96/122 (78%)
 Frame = +3

Query: 9   KSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQQ 188
           K ++  VF  FCKRV+NE    I SIRS HGGEFEN+ F+ FCE++   HNFS+PRTPQQ
Sbjct: 230 KDESFKVFHVFCKRVQNEKGISIASIRSYHGGEFENEQFQEFCEENEIKHNFSTPRTPQQ 289

Query: 189 NGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRGR 368
           NGVVERKN SLQE+ART+L ++ TPK FWAEAV+TSC +QNR++  P  KKTPYELW+GR
Sbjct: 290 NGVVERKNWSLQEIARTLLNDFSTPKHFWAEAVNTSCSIQNRIYLRPIMKKTPYELWKGR 349

Query: 369 KP 374
            P
Sbjct: 350 AP 351


>KYP53960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 468

 Score =  169 bits (429), Expect = 2e-48
 Identities = 75/122 (61%), Positives = 95/122 (77%)
 Frame = +3

Query: 9   KSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQQ 188
           K ++  VF  FCKRV+NE    I SIRSDHGGEFEN+ F+ FCE++   HNFS+P+TPQQ
Sbjct: 262 KDESFKVFYVFCKRVQNEKGISIASIRSDHGGEFENEQFQDFCEENRIKHNFSTPKTPQQ 321

Query: 189 NGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRGR 368
           NGV+ERKNRSLQEMART+L ++ TPK FW + V+ S ++QNR++  P  KKTPYELW+GR
Sbjct: 322 NGVLERKNRSLQEMARTLLNDFSTPKHFWEKTVNISYYIQNRIYIKPILKKTPYELWKGR 381

Query: 369 KP 374
            P
Sbjct: 382 AP 383


>KYP60252.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 237

 Score =  162 bits (410), Expect = 7e-48
 Identities = 73/123 (59%), Positives = 95/123 (77%)
 Frame = +3

Query: 6   SKSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQ 185
           +KS+  + F  F K V+NE +  I SIRSDHGGEF+N LF++FCE++G +HNFS+PRTPQ
Sbjct: 5   NKSEAFNAFKKFSKLVQNEKNTNITSIRSDHGGEFQNVLFQKFCEENGINHNFSTPRTPQ 64

Query: 186 QNGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRG 365
           QNGVVERKNRSL+E+ RTML E   PK FWA+A++T+C V N+V      K+TPYE++ G
Sbjct: 65  QNGVVERKNRSLEELTRTMLNETKLPKYFWADAINTACHVLNKVIIRSVLKRTPYEIYNG 124

Query: 366 RKP 374
           RKP
Sbjct: 125 RKP 127


>KYP59243.1 Copia protein [Cajanus cajan]
          Length = 445

 Score =  167 bits (424), Expect = 8e-48
 Identities = 78/123 (63%), Positives = 95/123 (77%)
 Frame = +3

Query: 6   SKSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQ 185
           +KSDT  VF  F K ++N+ + +IVSIRSDHG EFEN  F+ FCE++G  HNFS+PRTPQ
Sbjct: 221 NKSDTFSVFRKFAKLIQNKKNLKIVSIRSDHGKEFENKDFDLFCEENGIEHNFSAPRTPQ 280

Query: 186 QNGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRG 365
           QNGVVERKNRSL+E+ARTML +   PK FWAEAV+T+C+  NR    P  KKTPYEL+ G
Sbjct: 281 QNGVVERKNRSLEELARTMLNDSKLPKYFWAEAVNTACYTMNRALIRPILKKTPYELFNG 340

Query: 366 RKP 374
           RKP
Sbjct: 341 RKP 343


>KYP32635.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 375

 Score =  165 bits (418), Expect = 1e-47
 Identities = 76/124 (61%), Positives = 95/124 (76%)
 Frame = +3

Query: 3   VSKSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTP 182
           V+K++  + F  F K V+NE +  I SIRSDHGGEF+  LF++FCE+ G SHNFS+PRTP
Sbjct: 233 VNKNEAFNAFKKFSKLVQNEKNLNITSIRSDHGGEFQKILFQKFCEEHGISHNFSAPRTP 292

Query: 183 QQNGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWR 362
           QQNGVVERKNRSL+E+ARTML E   PK FW +A+ST+C V N+V   P  KKTPYE++ 
Sbjct: 293 QQNGVVERKNRSLEELARTMLNETKLPKYFWVDAISTACHVLNKVLIWPILKKTPYEIYN 352

Query: 363 GRKP 374
           GRKP
Sbjct: 353 GRKP 356


>KYP58030.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 446

 Score =  166 bits (419), Expect = 5e-47
 Identities = 75/123 (60%), Positives = 95/123 (77%)
 Frame = +3

Query: 6   SKSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQ 185
           +K+D  + F  F K V+NE S  I SIRSDHGGEF+N +F++FCE+ G +HNFS+PRTPQ
Sbjct: 234 NKNDAFNAFRKFAKLVQNEKSSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTPQ 293

Query: 186 QNGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRG 365
           QNGVVERKNRSL+E+ARTML E   PK  WA+A++T+C V N+V   P  KKTPYE++ G
Sbjct: 294 QNGVVERKNRSLEELARTMLNETKLPKYLWADAINTACHVLNKVLIRPILKKTPYEIYNG 353

Query: 366 RKP 374
           RKP
Sbjct: 354 RKP 356


>KYP78651.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 348

 Score =  162 bits (411), Expect = 9e-47
 Identities = 74/122 (60%), Positives = 93/122 (76%)
 Frame = +3

Query: 9   KSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQQ 188
           KS+  + F  F K V+NE +  I SIRSDHGGEF+N LF +FCE+ G +HNFS+PRTPQQ
Sbjct: 225 KSEAFNAFKKFAKLVQNEKNINITSIRSDHGGEFQNVLFRKFCEEHGINHNFSTPRTPQQ 284

Query: 189 NGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRGR 368
           NGVVERKNRSL+E+ARTML E   PK FWA+A++T+C V N+V   P  K+TPY ++ GR
Sbjct: 285 NGVVERKNRSLEELARTMLNETKLPKYFWADAINTACHVLNKVLIRPILKRTPYVIYNGR 344

Query: 369 KP 374
           KP
Sbjct: 345 KP 346


>KYP30912.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 766

 Score =  169 bits (429), Expect = 9e-47
 Identities = 77/123 (62%), Positives = 95/123 (77%)
 Frame = +3

Query: 6   SKSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQ 185
           SK +T   F+ FCK+V+NE    I  I+SDHGGEFEN  FE FC+++G SHNFS  RTPQ
Sbjct: 21  SKDETFKNFTIFCKKVQNEKGFCISVIKSDHGGEFENANFEMFCDENGISHNFSVARTPQ 80

Query: 186 QNGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRG 365
           QNGVVERKNRSLQEM RTML   + P+ FWAEA++T+C++QNR+   P  K+TPYELW+G
Sbjct: 81  QNGVVERKNRSLQEMGRTMLNSCNLPRSFWAEAINTACYLQNRILVRPILKRTPYELWKG 140

Query: 366 RKP 374
           RKP
Sbjct: 141 RKP 143


>ABD32582.1 Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score =  170 bits (431), Expect = 1e-46
 Identities = 77/123 (62%), Positives = 98/123 (79%)
 Frame = +3

Query: 6    SKSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQ 185
            SK    +VFSSFC ++++E   +I+ +RSDHGGEFEN+ FE FCEK G  H FSSPRTPQ
Sbjct: 900  SKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQ 959

Query: 186  QNGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRG 365
            QNGVVERKNR+LQEMARTM+ E +  K FWAEAV+TSC++QNR++  P  +KT YEL++G
Sbjct: 960  QNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKG 1019

Query: 366  RKP 374
            R+P
Sbjct: 1020 RRP 1022


>CAN64243.1 hypothetical protein VITISV_038459 [Vitis vinifera]
          Length = 497

 Score =  166 bits (419), Expect = 1e-46
 Identities = 76/122 (62%), Positives = 93/122 (76%)
 Frame = +3

Query: 9   KSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQQ 188
           K++    FS FC +V+NE S  I  IRSDHG EFEN  FE +C ++G +HNFS+PRTPQQ
Sbjct: 140 KNEAFYEFSKFCNKVQNEKSFTITCIRSDHGREFENIDFEYYCNENGINHNFSAPRTPQQ 199

Query: 189 NGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRGR 368
           NGV ERKNR+LQEMARTML E + PK FW EAV+TSC+V N++   P FKKTPYELW+ +
Sbjct: 200 NGVAERKNRTLQEMARTMLNENNLPKYFWVEAVNTSCYVLNKILLRPIFKKTPYELWKNK 259

Query: 369 KP 374
           KP
Sbjct: 260 KP 261


>KYP59259.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 368

 Score =  162 bits (410), Expect = 2e-46
 Identities = 73/123 (59%), Positives = 94/123 (76%)
 Frame = +3

Query: 6   SKSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQ 185
           +KS+  + F  F K V+NE +  I SIRSDHGGEF+N LF++FCE+ G +HNFS+PRTPQ
Sbjct: 126 NKSEAFNAFKKFAKLVQNEKNTNITSIRSDHGGEFQNILFQKFCEEHGINHNFSAPRTPQ 185

Query: 186 QNGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRG 365
           QNGVVE KNRSL+E+ARTML E   PK FWA+A++ +C V N+V   P  K+TPYE++ G
Sbjct: 186 QNGVVEMKNRSLEELARTMLNETKLPKYFWADAINAACHVLNKVLIRPILKRTPYEIYNG 245

Query: 366 RKP 374
           RKP
Sbjct: 246 RKP 248


>CAN74951.1 hypothetical protein VITISV_030567, partial [Vitis vinifera]
          Length = 2203

 Score =  169 bits (428), Expect = 3e-46
 Identities = 79/122 (64%), Positives = 92/122 (75%)
 Frame = +3

Query: 9    KSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQQ 188
            KS+    FS FC +V+NE    I  IRSDHG EFEN  FE +C K G +HNFS+PRTPQQ
Sbjct: 1136 KSEAFYEFSKFCNKVQNEKGFSITCIRSDHGREFENFDFEEYCNKHGINHNFSAPRTPQQ 1195

Query: 189  NGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRGR 368
            NGVVERKNR+LQEMARTML E + PK FWAEAV+TSC+V NR+   P  KKTPYELW+ +
Sbjct: 1196 NGVVERKNRTLQEMARTMLNENNLPKYFWAEAVNTSCYVLNRILLRPILKKTPYELWKNK 1255

Query: 369  KP 374
            KP
Sbjct: 1256 KP 1257



 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 40/116 (34%), Positives = 59/116 (50%)
 Frame = +3

Query: 9   KSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQQ 188
           KS    +   F   V+ +   ++  +++D GGEF     +   +K G       P   QQ
Sbjct: 543 KSQATSIVLQFIALVDRKFPTKLKCLQTDWGGEFHP--LQSLLQKKGILFRHPCPHVHQQ 600

Query: 189 NGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYEL 356
           NG VERK+RS+ E+  T+L +   P  FW  A ST+ ++ NR+ T     KTPYEL
Sbjct: 601 NGKVERKHRSIVEIGLTLLAKSQLPFTFWWHAFSTATYLLNRLPTPVLHCKTPYEL 656


>KYP31061.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 413

 Score =  163 bits (412), Expect = 3e-46
 Identities = 74/123 (60%), Positives = 95/123 (77%)
 Frame = +3

Query: 6   SKSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQ 185
           +K +  + F  F K V+NE +  I SIRSDHGGEF+N LF++FCE+ G +HN+S+PRTPQ
Sbjct: 224 NKIEAFNGFKKFAKLVQNEKNTNITSIRSDHGGEFQNILFQKFCEEHGINHNYSTPRTPQ 283

Query: 186 QNGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRG 365
           QNGVVERKNRSL+E+ARTML E   PK FWA+A++T+C V N+V   P  KKTPYE++ G
Sbjct: 284 QNGVVERKNRSLEELARTMLNETKLPKYFWADAINTACHVLNKVLIRPILKKTPYEIYNG 343

Query: 366 RKP 374
           RKP
Sbjct: 344 RKP 346


>KYP79135.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 318

 Score =  160 bits (405), Expect = 3e-46
 Identities = 74/123 (60%), Positives = 93/123 (75%)
 Frame = +3

Query: 6   SKSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQ 185
           +K++    F  F K V+NE +  I SIRSDHGGEF+N LF++FCE  G +HNFS+PRTPQ
Sbjct: 127 NKNEAFHAFKKFAKLVQNEKNSNITSIRSDHGGEFQNILFQKFCEVLGINHNFSAPRTPQ 186

Query: 186 QNGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRG 365
           QNGVVERKNRSL+E+ARTML E   PK FWA+A++T+C V N+V   P  KKTPYE++  
Sbjct: 187 QNGVVERKNRSLEELARTMLNETKLPKYFWADAINTACHVLNKVLIRPILKKTPYEVYNV 246

Query: 366 RKP 374
           RKP
Sbjct: 247 RKP 249


>KYP46043.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 241

 Score =  157 bits (398), Expect = 5e-46
 Identities = 71/122 (58%), Positives = 91/122 (74%)
 Frame = +3

Query: 9   KSDTLDVFSSFCKRVENEASCQIVSIRSDHGGEFENDLFERFCEKSGYSHNFSSPRTPQQ 188
           KSD  + F  F K V+NE +  I SIRSDH GEF+  LF++FCE+ G  HNFS+PRTPQQ
Sbjct: 6   KSDAFNAFKKFAKLVQNEKNTNITSIRSDHEGEFQKVLFQKFCEECGIDHNFSAPRTPQQ 65

Query: 189 NGVVERKNRSLQEMARTMLLEYDTPKKFWAEAVSTSCFVQNRVFTHPSFKKTPYELWRGR 368
           NGVVERKNRSL+E+ARTML E + PK FW +A++T+C V N+    P  K+TPYE+++G 
Sbjct: 66  NGVVERKNRSLEELARTMLNETNLPKYFWVDAINTTCHVLNKFLIRPILKRTPYEIYKGM 125

Query: 369 KP 374
           KP
Sbjct: 126 KP 127


Top