BLASTX nr result

ID: Alisma22_contig00023948 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00023948
         (293 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

JAT42878.1 F-box protein At3g62230 [Anthurium amnicola]                56   5e-07
XP_020092880.1 F-box/LRR-repeat protein At3g26922-like [Ananas c...    54   4e-06
CDM82615.1 unnamed protein product [Triticum aestivum]                 53   7e-06

>JAT42878.1 F-box protein At3g62230 [Anthurium amnicola]
          Length = 499

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
 Frame = +3

Query: 3   IFIRLPVTL----ILTAVHRDIDPPE-LQFDHLKALKVTNFFGTEPELELVLYFLEHAPL 167
           +FIRLP  L    + +A H  I+ P+ + F+HLK +K+TNF G+  ELELV + L  A  
Sbjct: 355 LFIRLPKVLEDPTLSSAKHEVIEGPQSVSFEHLKTVKMTNFKGSHSELELVKFLLARATN 414

Query: 168 LEKLVLVTSRSPSPLAPDRVALKERLDFQISIASS 272
           LE +VLV    P  L  DR  L E L  +  I ++
Sbjct: 415 LEYMVLVAPPIPM-LDDDRSKLVEYLKSESRIVAN 448


>XP_020092880.1 F-box/LRR-repeat protein At3g26922-like [Ananas comosus]
          Length = 508

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 37/79 (46%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
 Frame = +3

Query: 3   IFIRLPVTL-----ILTAVHRDIDPPELQFDHLKALKVTNFFGTEPELELVLYFLEHAPL 167
           +FI+LP  L     I      D D P + F+HLK +KVTNF G   EL LV + LE A +
Sbjct: 363 LFIQLPGELNELIDITYGAFIDEDSPGVLFNHLKVIKVTNFRGFVNELRLVKFLLEKAVV 422

Query: 168 LEKLVLVTSRSPSPLAPDR 224
           LE LVLVT     PL  DR
Sbjct: 423 LESLVLVT-----PLDVDR 436


>CDM82615.1 unnamed protein product [Triticum aestivum]
          Length = 508

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
 Frame = +3

Query: 3   IFIRLPVTLILTAVHRD----IDPPELQFDHLKALKVTNFFGTEPELELVLYFLEHAPLL 170
           +FIRLP  L  TAV  +    +   E+  DHL  LKV NF GT  EL L+ + L  AP+L
Sbjct: 377 LFIRLPDALGGTAVTGEGADIVLEYEIALDHLTFLKVVNFRGTRRELRLLRFVLRRAPVL 436

Query: 171 EKLVLVT 191
           E+LVLVT
Sbjct: 437 EQLVLVT 443


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