BLASTX nr result

ID: Alisma22_contig00023751 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00023751
         (521 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_008808984.1 PREDICTED: polyadenylation and cleavage factor ho...   192   1e-53
XP_008808980.1 PREDICTED: polyadenylation and cleavage factor ho...   192   1e-53
XP_018837816.1 PREDICTED: polyadenylation and cleavage factor ho...   173   1e-52
XP_010909642.1 PREDICTED: polyadenylation and cleavage factor ho...   189   2e-52
ERN19518.1 hypothetical protein AMTR_s00062p00031880 [Amborella ...   188   4e-52
XP_011628430.1 PREDICTED: polyadenylation and cleavage factor ho...   188   4e-52
XP_018683567.1 PREDICTED: polyadenylation and cleavage factor ho...   186   9e-52
XP_009404994.1 PREDICTED: polyadenylation and cleavage factor ho...   186   2e-51
XP_009404993.1 PREDICTED: polyadenylation and cleavage factor ho...   186   2e-51
XP_009404992.1 PREDICTED: polyadenylation and cleavage factor ho...   186   2e-51
XP_013611159.1 PREDICTED: polyadenylation and cleavage factor ho...   184   4e-51
XP_013611158.1 PREDICTED: polyadenylation and cleavage factor ho...   184   4e-51
XP_010931817.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a...   185   5e-51
CDY16640.1 BnaA09g20180D [Brassica napus]                             183   8e-51
XP_009399217.1 PREDICTED: polyadenylation and cleavage factor ho...   184   8e-51
XP_009399215.1 PREDICTED: polyadenylation and cleavage factor ho...   184   9e-51
XP_008784554.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a...   184   1e-50
XP_011000684.1 PREDICTED: polyadenylation and cleavage factor ho...   182   3e-50
XP_009114539.1 PREDICTED: polyadenylation and cleavage factor ho...   181   4e-50
XP_009114538.1 PREDICTED: polyadenylation and cleavage factor ho...   181   4e-50

>XP_008808984.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X2 [Phoenix dactylifera]
          Length = 977

 Score =  192 bits (488), Expect = 1e-53
 Identities = 90/121 (74%), Positives = 99/121 (81%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ KN KQKPSRKWFVSAKEWLSGAETLG D  PGFL  ET+TE+RED EM
Sbjct: 847  HMDWHVTKNRMSKNRKQKPSRKWFVSAKEWLSGAETLGNDVVPGFLPTETVTEKREDKEM 906

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD NQ  CALCGE FEDF+SDEA+EWMY+ AVYL +++       RS LGPIVHAKC
Sbjct: 907  AVPADENQNVCALCGEPFEDFYSDEAEEWMYRGAVYLYARDGYTEGLDRSQLGPIVHAKC 966

Query: 361  R 363
            R
Sbjct: 967  R 967


>XP_008808980.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Phoenix dactylifera] XP_008808981.1 PREDICTED:
            polyadenylation and cleavage factor homolog 4-like
            isoform X1 [Phoenix dactylifera] XP_008808982.1
            PREDICTED: polyadenylation and cleavage factor homolog
            4-like isoform X1 [Phoenix dactylifera] XP_008808983.1
            PREDICTED: polyadenylation and cleavage factor homolog
            4-like isoform X1 [Phoenix dactylifera]
          Length = 1065

 Score =  192 bits (488), Expect = 1e-53
 Identities = 90/121 (74%), Positives = 99/121 (81%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ KN KQKPSRKWFVSAKEWLSGAETLG D  PGFL  ET+TE+RED EM
Sbjct: 935  HMDWHVTKNRMSKNRKQKPSRKWFVSAKEWLSGAETLGNDVVPGFLPTETVTEKREDKEM 994

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD NQ  CALCGE FEDF+SDEA+EWMY+ AVYL +++       RS LGPIVHAKC
Sbjct: 995  AVPADENQNVCALCGEPFEDFYSDEAEEWMYRGAVYLYARDGYTEGLDRSQLGPIVHAKC 1054

Query: 361  R 363
            R
Sbjct: 1055 R 1055


>XP_018837816.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           [Juglans regia]
          Length = 151

 Score =  173 bits (439), Expect = 1e-52
 Identities = 83/124 (66%), Positives = 92/124 (74%)
 Frame = +1

Query: 4   MDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEMA 183
           MDWHVTKNR+ KN KQKPSRKWFVSA  WLSGAE LG +  PGFL  E I E+++D EMA
Sbjct: 1   MDWHVTKNRMSKNRKQKPSRKWFVSASMWLSGAEALGSEAVPGFLPTEVIVEKKDDEEMA 60

Query: 184 VPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKCR 363
           VPAD +Q  CALCGE F+DF+SDE +EWMYK AVYLN          RS LGPIVHAKCR
Sbjct: 61  VPADDDQNACALCGEPFDDFYSDETEEWMYKGAVYLNMPSGLTAGMDRSQLGPIVHAKCR 120

Query: 364 PISS 375
             SS
Sbjct: 121 SESS 124


>XP_010909642.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like [Elaeis
            guineensis]
          Length = 1053

 Score =  189 bits (480), Expect = 2e-52
 Identities = 88/121 (72%), Positives = 97/121 (80%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNRV KN KQKPSRKWFVSAKEWLSGAETLG D  PGFL  ET+T++RED EM
Sbjct: 923  HMDWHVTKNRVSKNRKQKPSRKWFVSAKEWLSGAETLGNDVVPGFLPTETVTDKREDKEM 982

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD NQ  CALCGE FEDF+SDE +EWMY+  VYL +++       RS LGPIVHAKC
Sbjct: 983  AVPADENQNVCALCGEPFEDFYSDETEEWMYRGTVYLYARDGYTEGLDRSQLGPIVHAKC 1042

Query: 361  R 363
            R
Sbjct: 1043 R 1043


>ERN19518.1 hypothetical protein AMTR_s00062p00031880 [Amborella trichopoda]
          Length = 1045

 Score =  188 bits (477), Expect = 4e-52
 Identities = 86/125 (68%), Positives = 98/125 (78%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ KN KQ PSRKWFVSAKEWLSG ETLG +P PGFL  ET+ E++ED EM
Sbjct: 903  HMDWHVTKNRMSKNRKQNPSRKWFVSAKEWLSGTETLGSEPVPGFLPVETVPEKKEDEEM 962

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD NQ  CALCGE F+DF+SDE +EWMYK AVYLN+    +    +S LGPIVHAKC
Sbjct: 963  AVPADENQSVCALCGEPFDDFYSDETEEWMYKGAVYLNAPAGSIEGMDKSQLGPIVHAKC 1022

Query: 361  RPISS 375
            R  S+
Sbjct: 1023 RSEST 1027


>XP_011628430.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Amborella
            trichopoda] XP_011628431.1 PREDICTED: polyadenylation and
            cleavage factor homolog 4 [Amborella trichopoda]
          Length = 1054

 Score =  188 bits (477), Expect = 4e-52
 Identities = 86/125 (68%), Positives = 98/125 (78%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ KN KQ PSRKWFVSAKEWLSG ETLG +P PGFL  ET+ E++ED EM
Sbjct: 903  HMDWHVTKNRMSKNRKQNPSRKWFVSAKEWLSGTETLGSEPVPGFLPVETVPEKKEDEEM 962

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD NQ  CALCGE F+DF+SDE +EWMYK AVYLN+    +    +S LGPIVHAKC
Sbjct: 963  AVPADENQSVCALCGEPFDDFYSDETEEWMYKGAVYLNAPAGSIEGMDKSQLGPIVHAKC 1022

Query: 361  RPISS 375
            R  S+
Sbjct: 1023 RSEST 1027


>XP_018683567.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X4 [Musa acuminata subsp. malaccensis]
          Length = 838

 Score =  186 bits (472), Expect = 9e-52
 Identities = 86/125 (68%), Positives = 100/125 (80%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ KN KQKPSRKW+VSAKEWLSGAE LG D  PGFL  E+++E++ED E+
Sbjct: 708  HMDWHVTKNRISKNRKQKPSRKWYVSAKEWLSGAEILGNDVVPGFLPTESVSEKKEDIEV 767

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD NQ  CALCGE FEDF+SDE +EWMYK AVYLN+ +  +    RS LGPIVHAKC
Sbjct: 768  AVPADENQNVCALCGELFEDFYSDETEEWMYKGAVYLNAPDGYIEGLDRSQLGPIVHAKC 827

Query: 361  RPISS 375
            R  S+
Sbjct: 828  RSESN 832


>XP_009404994.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X3 [Musa acuminata subsp. malaccensis]
          Length = 956

 Score =  186 bits (472), Expect = 2e-51
 Identities = 86/125 (68%), Positives = 100/125 (80%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ KN KQKPSRKW+VSAKEWLSGAE LG D  PGFL  E+++E++ED E+
Sbjct: 826  HMDWHVTKNRISKNRKQKPSRKWYVSAKEWLSGAEILGNDVVPGFLPTESVSEKKEDIEV 885

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD NQ  CALCGE FEDF+SDE +EWMYK AVYLN+ +  +    RS LGPIVHAKC
Sbjct: 886  AVPADENQNVCALCGELFEDFYSDETEEWMYKGAVYLNAPDGYIEGLDRSQLGPIVHAKC 945

Query: 361  RPISS 375
            R  S+
Sbjct: 946  RSESN 950


>XP_009404993.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X2 [Musa acuminata subsp. malaccensis]
          Length = 956

 Score =  186 bits (472), Expect = 2e-51
 Identities = 86/125 (68%), Positives = 100/125 (80%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ KN KQKPSRKW+VSAKEWLSGAE LG D  PGFL  E+++E++ED E+
Sbjct: 826  HMDWHVTKNRISKNRKQKPSRKWYVSAKEWLSGAEILGNDVVPGFLPTESVSEKKEDIEV 885

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD NQ  CALCGE FEDF+SDE +EWMYK AVYLN+ +  +    RS LGPIVHAKC
Sbjct: 886  AVPADENQNVCALCGELFEDFYSDETEEWMYKGAVYLNAPDGYIEGLDRSQLGPIVHAKC 945

Query: 361  RPISS 375
            R  S+
Sbjct: 946  RSESN 950


>XP_009404992.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Musa acuminata subsp. malaccensis]
          Length = 991

 Score =  186 bits (472), Expect = 2e-51
 Identities = 86/125 (68%), Positives = 100/125 (80%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ KN KQKPSRKW+VSAKEWLSGAE LG D  PGFL  E+++E++ED E+
Sbjct: 861  HMDWHVTKNRISKNRKQKPSRKWYVSAKEWLSGAEILGNDVVPGFLPTESVSEKKEDIEV 920

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD NQ  CALCGE FEDF+SDE +EWMYK AVYLN+ +  +    RS LGPIVHAKC
Sbjct: 921  AVPADENQNVCALCGELFEDFYSDETEEWMYKGAVYLNAPDGYIEGLDRSQLGPIVHAKC 980

Query: 361  RPISS 375
            R  S+
Sbjct: 981  RSESN 985


>XP_013611159.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
            [Brassica oleracea var. oleracea] XP_013711336.1
            PREDICTED: polyadenylation and cleavage factor homolog
            4-like isoform X2 [Brassica napus]
          Length = 773

 Score =  184 bits (466), Expect = 4e-51
 Identities = 84/125 (67%), Positives = 98/125 (78%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ KN KQKPSRKWFVS   WLSGAE LG +  PGFL  E  TE+++D EM
Sbjct: 634  HMDWHVTKNRMSKNHKQKPSRKWFVSGSMWLSGAEALGAEAVPGFLPVEPTTEKKDDEEM 693

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD +Q  CALCGEAFEDF+SDE +EWMYK AVY+N+ +    +  +SLLGPIVHAKC
Sbjct: 694  AVPADEDQTSCALCGEAFEDFYSDETEEWMYKGAVYMNAPDGSTTDVDKSLLGPIVHAKC 753

Query: 361  RPISS 375
            RP S+
Sbjct: 754  RPESN 758


>XP_013611158.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
            [Brassica oleracea var. oleracea] XP_013711335.1
            PREDICTED: polyadenylation and cleavage factor homolog
            4-like isoform X1 [Brassica napus]
          Length = 774

 Score =  184 bits (466), Expect = 4e-51
 Identities = 84/125 (67%), Positives = 98/125 (78%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ KN KQKPSRKWFVS   WLSGAE LG +  PGFL  E  TE+++D EM
Sbjct: 635  HMDWHVTKNRMSKNHKQKPSRKWFVSGSMWLSGAEALGAEAVPGFLPVEPTTEKKDDEEM 694

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD +Q  CALCGEAFEDF+SDE +EWMYK AVY+N+ +    +  +SLLGPIVHAKC
Sbjct: 695  AVPADEDQTSCALCGEAFEDFYSDETEEWMYKGAVYMNAPDGSTTDVDKSLLGPIVHAKC 754

Query: 361  RPISS 375
            RP S+
Sbjct: 755  RPESN 759


>XP_010931817.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
            homolog 4 [Elaeis guineensis]
          Length = 1070

 Score =  185 bits (469), Expect = 5e-51
 Identities = 87/125 (69%), Positives = 97/125 (77%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ K  KQKPSR+WFVSAKEWLSGAE LG D  PGFL  E +TE++ED EM
Sbjct: 940  HMDWHVTKNRISKYRKQKPSRRWFVSAKEWLSGAEALGNDVVPGFLPTEAVTEKKEDKEM 999

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD NQ  CALCGE FEDF+SD+ +EWMYK AVYLN+ E       RS LGPIVHAKC
Sbjct: 1000 AVPADENQTVCALCGEPFEDFYSDDTEEWMYKGAVYLNAPEGYSEGLDRSQLGPIVHAKC 1059

Query: 361  RPISS 375
            R  S+
Sbjct: 1060 RSEST 1064


>CDY16640.1 BnaA09g20180D [Brassica napus]
          Length = 774

 Score =  183 bits (464), Expect = 8e-51
 Identities = 83/122 (68%), Positives = 96/122 (78%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ KN KQKPSRKWFVS   WLSGAE LG +  PGFL  E  TE+++D EM
Sbjct: 635  HMDWHVTKNRMSKNHKQKPSRKWFVSGSMWLSGAEALGAEAVPGFLPVEPTTEKKDDEEM 694

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD +Q  CALCGEAFEDF+SDE +EWMYK AVY+N+ +    +  +SLLGPIVHAKC
Sbjct: 695  AVPADEDQTSCALCGEAFEDFYSDETEEWMYKGAVYMNAPDGSTTDVDKSLLGPIVHAKC 754

Query: 361  RP 366
            RP
Sbjct: 755  RP 756


>XP_009399217.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X2 [Musa acuminata subsp. malaccensis]
          Length = 1000

 Score =  184 bits (467), Expect = 8e-51
 Identities = 83/121 (68%), Positives = 97/121 (80%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ +N KQKPSRKWFVSAKEWLSGAE LG D  PGFL  E++ E++ED E+
Sbjct: 870  HMDWHVTKNRISRNRKQKPSRKWFVSAKEWLSGAEILGNDVVPGFLPTESVAEKKEDKEV 929

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD NQ  CALCGE FEDF+SDE +EWMY+ AVYLN+ +  +    RS LGPIVH+KC
Sbjct: 930  AVPADENQNVCALCGEPFEDFYSDETEEWMYRGAVYLNAPDGNLEGLDRSQLGPIVHSKC 989

Query: 361  R 363
            R
Sbjct: 990  R 990


>XP_009399215.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Musa acuminata subsp. malaccensis] XP_009399216.1
            PREDICTED: polyadenylation and cleavage factor homolog
            4-like isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 1039

 Score =  184 bits (467), Expect = 9e-51
 Identities = 83/121 (68%), Positives = 97/121 (80%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ +N KQKPSRKWFVSAKEWLSGAE LG D  PGFL  E++ E++ED E+
Sbjct: 909  HMDWHVTKNRISRNRKQKPSRKWFVSAKEWLSGAEILGNDVVPGFLPTESVAEKKEDKEV 968

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD NQ  CALCGE FEDF+SDE +EWMY+ AVYLN+ +  +    RS LGPIVH+KC
Sbjct: 969  AVPADENQNVCALCGEPFEDFYSDETEEWMYRGAVYLNAPDGNLEGLDRSQLGPIVHSKC 1028

Query: 361  R 363
            R
Sbjct: 1029 R 1029


>XP_008784554.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
            homolog 4-like [Phoenix dactylifera]
          Length = 1063

 Score =  184 bits (466), Expect = 1e-50
 Identities = 87/125 (69%), Positives = 97/125 (77%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ K  KQKPSRKWFVSAKEWLSGAE LG D  PGFL  E +TE++ED E+
Sbjct: 933  HMDWHVTKNRISKYRKQKPSRKWFVSAKEWLSGAEALGNDVVPGFLPTEDVTEKKEDKEL 992

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD NQ  CALCGE FEDF+SD+A+EWMYK AVYLN+ E       R  LGPIVHAKC
Sbjct: 993  AVPADENQTVCALCGEPFEDFYSDDAEEWMYKGAVYLNAPEGYSEGLDRLQLGPIVHAKC 1052

Query: 361  RPISS 375
            R  S+
Sbjct: 1053 RSEST 1057


>XP_011000684.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
            [Populus euphratica]
          Length = 980

 Score =  182 bits (463), Expect = 3e-50
 Identities = 85/125 (68%), Positives = 96/125 (76%)
 Frame = +1

Query: 1    HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
            HMDWHVTKNR+ KN KQ PSRKWFVSA  WLSGAE LG D  PGFL  ETI E+++D+EM
Sbjct: 831  HMDWHVTKNRMSKNRKQNPSRKWFVSASMWLSGAEALGTDAVPGFLPTETIVEKKDDDEM 890

Query: 181  AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
            AVPAD  Q  CALCGE F+DF+SDE +EWMYK AVYLN+ +    +  RS LGPIVHAKC
Sbjct: 891  AVPADEEQSTCALCGEPFDDFYSDETEEWMYKGAVYLNASDGSTADMDRSQLGPIVHAKC 950

Query: 361  RPISS 375
            R  SS
Sbjct: 951  RSDSS 955


>XP_009114539.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Brassica rapa] XP_013662004.1 PREDICTED:
           polyadenylation and cleavage factor homolog 4-like
           isoform X2 [Brassica napus]
          Length = 772

 Score =  181 bits (459), Expect = 4e-50
 Identities = 82/122 (67%), Positives = 95/122 (77%)
 Frame = +1

Query: 1   HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
           HMDWHVTKNR+ KN KQKPSRKWFVS   WLSGAE LG +  PGFL  E  TE+++D EM
Sbjct: 633 HMDWHVTKNRMSKNHKQKPSRKWFVSGSMWLSGAEALGAEAVPGFLPVEPTTEKKDDEEM 692

Query: 181 AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
           AVPAD +Q  CALCGE FEDF+SDE +EWMYK AVY+N+ +    +  +SLLGPIVHAKC
Sbjct: 693 AVPADEDQTSCALCGEPFEDFYSDETEEWMYKGAVYMNAPDGSTTDVDKSLLGPIVHAKC 752

Query: 361 RP 366
           RP
Sbjct: 753 RP 754


>XP_009114538.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Brassica rapa] XP_013662003.1 PREDICTED:
           polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Brassica napus]
          Length = 773

 Score =  181 bits (459), Expect = 4e-50
 Identities = 82/122 (67%), Positives = 95/122 (77%)
 Frame = +1

Query: 1   HMDWHVTKNRVLKNCKQKPSRKWFVSAKEWLSGAETLGIDPAPGFLTAETITERREDNEM 180
           HMDWHVTKNR+ KN KQKPSRKWFVS   WLSGAE LG +  PGFL  E  TE+++D EM
Sbjct: 634 HMDWHVTKNRMSKNHKQKPSRKWFVSGSMWLSGAEALGAEAVPGFLPVEPTTEKKDDEEM 693

Query: 181 AVPADVNQKFCALCGEAFEDFFSDEADEWMYKEAVYLNSQERRVHEYGRSLLGPIVHAKC 360
           AVPAD +Q  CALCGE FEDF+SDE +EWMYK AVY+N+ +    +  +SLLGPIVHAKC
Sbjct: 694 AVPADEDQTSCALCGEPFEDFYSDETEEWMYKGAVYMNAPDGSTTDVDKSLLGPIVHAKC 753

Query: 361 RP 366
           RP
Sbjct: 754 RP 755


Top