BLASTX nr result
ID: Alisma22_contig00023520
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00023520
(580 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAU85822.1 Retrovirus-related Pol polyprotein from transposon TN... 94 4e-21
ABA91402.1 retrotransposon protein, putative, Ty1-copia subclass... 93 6e-20
CAE01581.2 OSJNBa0068L06.7 [Oryza sativa Japonica Group] 92 6e-20
AAM22635.1 Gag and Pol [Zea mays] 92 1e-19
AAP54013.1 retrotransposon protein, putative, Ty1-copia subclass... 90 2e-19
CAE04541.2 OSJNBa0040D17.9 [Oryza sativa Japonica Group] 92 2e-19
CAD40744.2 OSJNBa0072D21.4 [Oryza sativa Japonica Group] 92 2e-19
ABA99836.1 retrotransposon protein, putative, Ty1-copia subclass... 92 2e-19
AAX95047.1 retrotransposon protein, putative, Ty1-copia sub-clas... 91 2e-19
ABG22406.1 retrotransposon protein, putative, Ty1-copia subclass... 91 2e-19
ABF96702.1 retrotransposon protein, putative, Ty1-copia subclass... 91 2e-19
AAU44026.2 putative polyprotein [Oryza sativa Japonica Group] 91 2e-19
CAE02325.2 OSJNBb0112E13.7 [Oryza sativa Japonica Group] 91 2e-19
CAE01299.2 OSJNBa0020P07.16 [Oryza sativa Japonica Group] 91 2e-19
CAD40198.2 OSJNBb0043H09.7 [Oryza sativa Japonica Group] 91 2e-19
AAR01682.1 putative gag and pol protein [Oryza sativa Japonica G... 91 2e-19
AAP20858.1 retrotransposon protein, putative, Ty1-copia sub-clas... 91 2e-19
ABF94929.1 retrotransposon protein, putative, Ty1-copia subclass... 91 2e-19
CAE03764.2 OSJNBa0013K16.13 [Oryza sativa Japonica Group] 91 2e-19
AAT58846.1 putative polyprotein [Oryza sativa Japonica Group] 91 2e-19
>JAU85822.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Noccaea caerulescens]
Length = 157
Score = 94.4 bits (233), Expect = 4e-21
Identities = 58/136 (42%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Frame = -2
Query: 525 EAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRRHI 346
E+E ALD+ E EWL + +PM +K + A+ VHCDS IA+ S+ YN K RHI
Sbjct: 2 ESEFIALDKAAEEAEWLRNFLEDIPMWEKPVPALRVHCDSQSAIARALSNLYNGKS-RHI 60
Query: 345 *VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPLIIRRQ*Q- 169
K++R L + + DN ADPFTKGL+ VEKS GMGLKP R++ +
Sbjct: 61 RRRHKTIRHLVSTGVITIDYIRSADNLADPFTKGLSRDQVEKSSKGMGLKP---RKKDEV 117
Query: 168 ---PYPTECRSHKLGS 130
P+ E RSH++GS
Sbjct: 118 WWKPHLPEWRSHEVGS 133
>ABA91402.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2027
Score = 93.2 bits (230), Expect(2) = 6e-20
Identities = 49/116 (42%), Positives = 70/116 (60%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1384 TMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 1443
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPLII 184
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+++
Sbjct: 1444 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPMLV 1499
Score = 31.6 bits (70), Expect(2) = 6e-20
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1367 GGAVSWRSCKQTILTR 1382
>CAE01581.2 OSJNBa0068L06.7 [Oryza sativa Japonica Group]
Length = 873
Score = 92.0 bits (227), Expect(2) = 6e-20
Identities = 48/114 (42%), Positives = 69/114 (60%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EW+ L+ LP+V+K + AI ++CD+ I K+ S+K N K R
Sbjct: 760 TMEAELTALDTATVEAEWMRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSYKDNMKSSR 819
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 820 HVKRRLKSVRKLRNFGVITLDYIQTAKNLADPFTKGLSRNVIDNASKEMGLRPM 873
Score = 32.7 bits (73), Expect(2) = 6e-20
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 743 GGAVSWRSSKQTILTR 758
>AAM22635.1 Gag and Pol [Zea mays]
Length = 1264
Score = 92.4 bits (228), Expect(2) = 1e-19
Identities = 50/113 (44%), Positives = 67/113 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ IAK+ S K N K R
Sbjct: 1151 TMEAELAALDTATVEAEWLRELLMDLPVVEKPIPAILMNCDNQTVIAKVTSSKDNGKSSR 1210
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKP 193
H+ LKSVR+L + T N ADPFTKGL ++E + MG++P
Sbjct: 1211 HVKRRLKSVRKLRNSGVISVTYISTDKNLADPFTKGLPRNVIEIASREMGMRP 1263
Score = 31.6 bits (70), Expect(2) = 1e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1134 GGAVSWRSCKQTILTR 1149
>AAP54013.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 144
Score = 89.7 bits (221), Expect = 2e-19
Identities = 48/117 (41%), Positives = 69/117 (58%)
Frame = -2
Query: 525 EAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRRHI 346
EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K RH+
Sbjct: 2 EAELTALDTATVEAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIIKVNSSKDNMKSSRHV 61
Query: 345 *VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPLIIRRQ 175
LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+ ++
Sbjct: 62 KRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNMIDNASKEMGLRPIAFLKE 118
>CAE04541.2 OSJNBa0040D17.9 [Oryza sativa Japonica Group]
Length = 1319
Score = 91.7 bits (226), Expect(2) = 2e-19
Identities = 49/119 (41%), Positives = 70/119 (58%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1189 TMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 1248
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPLIIRRQ 175
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+ ++
Sbjct: 1249 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPIAFLKE 1307
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1172 GGAVSWRSCKQTILTR 1187
>CAD40744.2 OSJNBa0072D21.4 [Oryza sativa Japonica Group]
Length = 1319
Score = 91.7 bits (226), Expect(2) = 2e-19
Identities = 49/119 (41%), Positives = 70/119 (58%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1189 TMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 1248
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPLIIRRQ 175
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+ ++
Sbjct: 1249 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPIAFLKE 1307
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1172 GGAVSWRSCKQTILTR 1187
>ABA99836.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1302
Score = 91.7 bits (226), Expect(2) = 2e-19
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1189 TMEAELTALDTATVEAEWLRDLLMDLPVVEKPVSAILMNCDNQTVIVKVNSSKDNMKSSR 1248
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 1249 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPM 1302
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1172 GGAVSWRSCKQTILTR 1187
>AAX95047.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 2266
Score = 91.3 bits (225), Expect(2) = 2e-19
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 692 TMEAELTALDTATVEAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 751
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 752 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 805
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 675 GGAVSWRSCKQTILTR 690
>ABG22406.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2188
Score = 91.3 bits (225), Expect(2) = 2e-19
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 614 TMEAELTALDTATVEAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 673
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 674 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 727
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 597 GGAVSWRSCKQTILTR 612
>ABF96702.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1518
Score = 91.3 bits (225), Expect(2) = 2e-19
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1405 TMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 1464
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 1465 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPM 1518
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1388 GGAVSWRSCKQTILTR 1403
>AAU44026.2 putative polyprotein [Oryza sativa Japonica Group]
Length = 1391
Score = 91.3 bits (225), Expect(2) = 2e-19
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1278 TMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 1337
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 1338 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPM 1391
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1261 GGAVSWRSCKQTILTR 1276
>CAE02325.2 OSJNBb0112E13.7 [Oryza sativa Japonica Group]
Length = 1342
Score = 91.3 bits (225), Expect(2) = 2e-19
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1189 TMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 1248
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 1249 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 1302
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1172 GGAVSWRSCKQTILTR 1187
>CAE01299.2 OSJNBa0020P07.16 [Oryza sativa Japonica Group]
Length = 1314
Score = 91.3 bits (225), Expect(2) = 2e-19
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1161 TMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 1220
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 1221 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 1274
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1144 GGAVSWRSCKQTILTR 1159
>CAD40198.2 OSJNBb0043H09.7 [Oryza sativa Japonica Group]
Length = 1302
Score = 91.3 bits (225), Expect(2) = 2e-19
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1189 TMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 1248
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 1249 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPM 1302
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1172 GGAVSWRSCKQTILTR 1187
>AAR01682.1 putative gag and pol protein [Oryza sativa Japonica Group]
Length = 1302
Score = 91.3 bits (225), Expect(2) = 2e-19
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1189 TMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 1248
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 1249 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPM 1302
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1172 GGAVSWRSCKQTILTR 1187
>AAP20858.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1302
Score = 91.3 bits (225), Expect(2) = 2e-19
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1189 TMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 1248
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 1249 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPM 1302
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1172 GGAVSWRSCKQTILTR 1187
>ABF94929.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1284
Score = 91.3 bits (225), Expect(2) = 2e-19
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1084 TMEAELTALDTATVEAEWLRDLLMDLPIVEKPVPAIVMNCDNQTVIVKVNSSKDNMKSSR 1143
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 1144 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 1197
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1067 GGAVSWRSCKQTILTR 1082
>CAE03764.2 OSJNBa0013K16.13 [Oryza sativa Japonica Group]
Length = 1264
Score = 91.3 bits (225), Expect(2) = 2e-19
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1151 TMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 1210
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 1211 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPM 1264
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1134 GGAVSWRSCKQTILTR 1149
>AAT58846.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1229
Score = 91.3 bits (225), Expect(2) = 2e-19
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = -2
Query: 531 TFEAELCALDETGLEVEWLHGLMSSLPMVKKSLLAISVHCDSTITIAKIKSHKYNNKQRR 352
T EAEL ALD +E EWL L+ LP+V+K + AI ++CD+ I K+ S K N K R
Sbjct: 1116 TMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSR 1175
Query: 351 HI*VILKSVRELXXXXXXXXXXVGTKDNTADPFTKGLTLALVEKSKLGMGLKPL 190
H+ LKSVR+L + T N ADPFTKGL+ +++ + MGL+P+
Sbjct: 1176 HVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPM 1229
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 580 GGAVSWRSKKQTILSR 533
GGAVSWRS KQTIL+R
Sbjct: 1099 GGAVSWRSCKQTILTR 1114