BLASTX nr result

ID: Alisma22_contig00022545 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00022545
         (535 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

JAT59611.1 Carboxy-terminal domain RNA polymerase II polypeptide...    59   6e-07
CDP02804.1 unnamed protein product [Coffea canephora] CDP01667.1...    54   1e-06
XP_010922553.1 PREDICTED: CTD small phosphatase-like protein 2 [...    55   6e-06
CDM84840.1 unnamed protein product [Triticum aestivum]                 55   8e-06
CDP14017.1 unnamed protein product [Coffea canephora]                  55   8e-06

>JAT59611.1 Carboxy-terminal domain RNA polymerase II polypeptide A small
           phosphatase 1, partial [Anthurium amnicola]
          Length = 365

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 37/73 (50%), Positives = 45/73 (61%)
 Frame = -2

Query: 330 MAELAQAEVLAAPGRQQRSGGGKTLQAWRAVLNCVAFXXXXXXXXLRGTPSSLAQLLSYL 151
           MAELAQ+EV A  GRQ      KTLQ WR +LN V+F        LRGTP S AQ+LSY+
Sbjct: 56  MAELAQSEVYAPAGRQN-----KTLQLWRTLLNWVSFLFQILLQILRGTP-SWAQVLSYV 109

Query: 150 GFRYPAAALCSSP 112
           G R+ +    +SP
Sbjct: 110 GLRHTSLLSPASP 122


>CDP02804.1 unnamed protein product [Coffea canephora] CDP01667.1 unnamed
           protein product [Coffea canephora]
          Length = 88

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 34/74 (45%), Positives = 44/74 (59%)
 Frame = -2

Query: 330 MAELAQAEVLAAPGRQQRSGGGKTLQAWRAVLNCVAFXXXXXXXXLRGTPSSLAQLLSYL 151
           MAELAQ+  + AP         KT+Q WRA+LN +AF        +RGT SSL Q+LSY+
Sbjct: 1   MAELAQSADVYAP---------KTIQVWRALLNWLAFFFQIFVQIIRGT-SSLTQVLSYV 50

Query: 150 GFRYPAAALCSSPQ 109
           G R+ +    SSPQ
Sbjct: 51  GLRHSSLLSSSSPQ 64


>XP_010922553.1 PREDICTED: CTD small phosphatase-like protein 2 [Elaeis guineensis]
          Length = 302

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 35/72 (48%), Positives = 44/72 (61%)
 Frame = -2

Query: 330 MAELAQAEVLAAPGRQQRSGGGKTLQAWRAVLNCVAFXXXXXXXXLRGTPSSLAQLLSYL 151
           MAELA AEV AA GR+ ++G     QAWR VL  + F        LRGTP S AQ+LS++
Sbjct: 1   MAELAAAEVYAAAGRRTKTG-----QAWRTVLGWLGFLFQILLQILRGTP-SWAQVLSFV 54

Query: 150 GFRYPAAALCSS 115
           G R+P  +  SS
Sbjct: 55  GLRHPLLSSSSS 66


>CDM84840.1 unnamed protein product [Triticum aestivum]
          Length = 313

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
 Frame = -2

Query: 321 LAQAEVL---AAPGRQQRSGGGKTLQAWRAVLNCVAFXXXXXXXXLRGTPSSLAQLLSYL 151
           +A AEV    AA   Q +  G    QAW+AV+  + F        LRGTPS  AQLLS++
Sbjct: 1   MAAAEVYSPTAAAAAQHQQRGKAATQAWQAVVGWIGFLLQVLLQILRGTPSC-AQLLSFV 59

Query: 150 GFRYPAAALCSSPQVSTDDIAF 85
           GFRYP  +  ++P   + ++AF
Sbjct: 60  GFRYPLLSATAAPDQPSPEVAF 81


>CDP14017.1 unnamed protein product [Coffea canephora]
          Length = 317

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 34/74 (45%), Positives = 44/74 (59%)
 Frame = -2

Query: 330 MAELAQAEVLAAPGRQQRSGGGKTLQAWRAVLNCVAFXXXXXXXXLRGTPSSLAQLLSYL 151
           MAELAQ+  + AP         KT+Q WRA+LN +AF        +RGTP SL Q+LSY+
Sbjct: 1   MAELAQSADVYAP---------KTIQVWRALLNWLAFFFQIFVQIIRGTP-SLTQVLSYV 50

Query: 150 GFRYPAAALCSSPQ 109
           G R+ +    SSPQ
Sbjct: 51  GLRHSSLLSSSSPQ 64


Top