BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00022048
         (632 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAA22288.1 polyprotein [Oryza australiensis]                          228   7e-78
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]    225   8e-76
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass...   222   1e-75
AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]         222   1e-75
AAM74249.1 Putative retroelement [Oryza sativa Japonica Group]        220   7e-75
AAP52343.2 retrotransposon protein, putative, Ty1-copia subclass...   220   7e-75
AAV85747.1 Integrase core domain, putative [Oryza sativa Japonic...   221   9e-75
ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass...   220   9e-75
AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]         220   9e-75
ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass...   217   9e-75
AAR06328.1 putative polyprotein [Oryza sativa Japonica Group]         217   9e-75
ABA97705.1 retrotransposon protein, putative, Ty1-copia subclass...   217   6e-74
EXX50149.1 gag-pol fusion protein [Rhizophagus irregularis DAOM ...   217   6e-73
AAL83352.1 Putative polyprotein [Oryza sativa Japonica Group] AA...   211   5e-72
ADB85411.1 putative retrotransposon protein [Phyllostachys edulis]    223   1e-71
AAC26250.1 contains similarity to reverse transcriptase (Pfam: r...   214   1e-70
KYP68472.1 Retrovirus-related Pol polyprotein from transposon TN...   216   1e-70
ABA99022.2 retrotransposon protein, putative, Ty1-copia subclass...   204   2e-69
AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-clas...   232   2e-67
AAK52163.1 putative polyprotein [Oryza sativa Japonica Group]         226   5e-67

>BAA22288.1 polyprotein [Oryza australiensis]
          Length = 1317

 Score =  228 bits (582), Expect(2) = 7e-78
 Identities = 108/148 (72%), Positives = 132/148 (89%)
 Frame = +1

Query: 187  VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
            VKT FLNGNL EDVYM QP+GF++P+   K+CKLQ+SIYGLKQAS+SWN+ FD+V+K FG
Sbjct: 907  VKTAFLNGNLSEDVYMIQPQGFVDPESPGKICKLQKSIYGLKQASRSWNIRFDEVIKGFG 966

Query: 367  FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
            F +NE+E C+YKKV+GS +VFLILYVDDILL+ NDIP LE+VK  L N+FS+KDLG+A+Y
Sbjct: 967  FIKNEEEACVYKKVSGSAIVFLILYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAY 1026

Query: 547  ILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
            ILGI+IYRDRS+RL+GLSQSTYIDKVLK
Sbjct: 1027 ILGIRIYRDRSKRLIGLSQSTYIDKVLK 1054



 Score = 90.5 bits (223), Expect(2) = 7e-78
 Identities = 44/64 (68%), Positives = 51/64 (79%)
 Frame = +2

Query: 2    FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
            FKK  DMDGNV  YK RL+AKGF +IQGVD D+TFS V M+KSI IILAIA Y DY+IWQ
Sbjct: 845  FKKKADMDGNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQ 904

Query: 182  IMLK 193
            + +K
Sbjct: 905  MDVK 908


>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  225 bits (574), Expect(2) = 8e-76
 Identities = 109/147 (74%), Positives = 130/147 (88%)
 Frame = +1

Query: 187  VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
            VKT FLNG L EDVYMTQPEGF++P  A+KVCKLQ+SIYGLKQAS+SWN+ FD+ +K FG
Sbjct: 903  VKTAFLNGKLSEDVYMTQPEGFVDPNNASKVCKLQKSIYGLKQASRSWNIRFDEEIKRFG 962

Query: 367  FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
            F +N++E C+Y KV+GST+V LILYVDDILL+ NDIP LE+VK  L N+FS+KDLG+A+Y
Sbjct: 963  FVKNKEEPCVYMKVSGSTLVILILYVDDILLIGNDIPMLESVKASLKNSFSMKDLGEAAY 1022

Query: 547  ILGIKIYRDRSRRLLGLSQSTYIDKVL 627
            ILGIKIYRDRSRRL+GLSQSTYIDKVL
Sbjct: 1023 ILGIKIYRDRSRRLIGLSQSTYIDKVL 1049



 Score = 86.7 bits (213), Expect(2) = 8e-76
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = +2

Query: 2    FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
            +KK  DMDGNV  +K RL+AKGF ++QGVD D+TFS V M+KSI IILAIA Y DY+IWQ
Sbjct: 841  YKKKIDMDGNVHIHKARLVAKGFRQVQGVDYDETFSLVAMLKSIRIILAIAAYFDYEIWQ 900

Query: 182  IMLK 193
            + +K
Sbjct: 901  MDVK 904


>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  222 bits (566), Expect(2) = 1e-75
 Identities = 107/148 (72%), Positives = 131/148 (88%)
 Frame = +1

Query: 187  VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
            VKT FLNGNL EDVYMTQP+GF++P+ A K+CKLQ+SIY LKQAS+SWN+ FD+VVK  G
Sbjct: 856  VKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYRLKQASRSWNIRFDEVVKALG 915

Query: 367  FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
            F +NE+E C+YKK++GS +VFLILYVDDILL+ NDIP LE+VK  L  +FS+KDLG+A+Y
Sbjct: 916  FVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAY 975

Query: 547  ILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
            ILGI+IYRDRS+RL+GLSQSTYIDKVLK
Sbjct: 976  ILGIRIYRDRSKRLIGLSQSTYIDKVLK 1003



 Score = 89.0 bits (219), Expect(2) = 1e-75
 Identities = 42/64 (65%), Positives = 51/64 (79%)
 Frame = +2

Query: 2   FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
           FKKMTD+DG V  Y  RL+AKGF +IQGVD D+TFS V M+KSI I+LAIA Y DY+IWQ
Sbjct: 794 FKKMTDVDGTVHIYNARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQ 853

Query: 182 IMLK 193
           + +K
Sbjct: 854 MDVK 857


>AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  222 bits (566), Expect(2) = 1e-75
 Identities = 107/148 (72%), Positives = 131/148 (88%)
 Frame = +1

Query: 187  VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
            VKT FLNGNL EDVYMTQP+GF++P+ A K+CKLQ+SIY LKQAS+SWN+ FD+VVK  G
Sbjct: 769  VKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYRLKQASRSWNIRFDEVVKALG 828

Query: 367  FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
            F +NE+E C+YKK++GS +VFLILYVDDILL+ NDIP LE+VK  L  +FS+KDLG+A+Y
Sbjct: 829  FVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAY 888

Query: 547  ILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
            ILGI+IYRDRS+RL+GLSQSTYIDKVLK
Sbjct: 889  ILGIRIYRDRSKRLIGLSQSTYIDKVLK 916



 Score = 89.0 bits (219), Expect(2) = 1e-75
 Identities = 42/64 (65%), Positives = 51/64 (79%)
 Frame = +2

Query: 2   FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
           FKKMTD+DG V  Y  RL+AKGF +IQGVD D+TFS V M+KSI I+LAIA Y DY+IWQ
Sbjct: 707 FKKMTDVDGTVHIYNARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQ 766

Query: 182 IMLK 193
           + +K
Sbjct: 767 MDVK 770


>AAM74249.1 Putative retroelement [Oryza sativa Japonica Group]
          Length = 700

 Score =  220 bits (560), Expect(2) = 7e-75
 Identities = 103/145 (71%), Positives = 130/145 (89%)
 Frame = +1

Query: 187 VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
           VKT FL+GNL EDVYMTQP+GF++P+ A K+CKLQ+SIYGLKQAS+SWN+ FD+V+K  G
Sbjct: 461 VKTAFLSGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVIKALG 520

Query: 367 FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
           F +NE+E C+YKK+NGS ++FLILYVDDILL+ NDIP LE+VK  L N+FS+KDLG+A+Y
Sbjct: 521 FVKNEEEPCVYKKINGSALMFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAY 580

Query: 547 ILGIKIYRDRSRRLLGLSQSTYIDK 621
           ILGI+IYRDRS+RL+GLSQSTYI+K
Sbjct: 581 ILGIRIYRDRSKRLIGLSQSTYINK 605



 Score = 89.0 bits (219), Expect(2) = 7e-75
 Identities = 42/64 (65%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
           FKK TD+DGNV  YK RL+AKGF +IQGV+ D+TFS V M+KSI I+LAIA Y DY+IWQ
Sbjct: 399 FKKKTDVDGNVHIYKARLVAKGFRQIQGVNYDETFSPVAMLKSIRIVLAIAAYFDYEIWQ 458

Query: 182 IMLK 193
           + +K
Sbjct: 459 MDVK 462


>AAP52343.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 655

 Score =  220 bits (560), Expect(2) = 7e-75
 Identities = 103/145 (71%), Positives = 130/145 (89%)
 Frame = +1

Query: 187 VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
           VKT FL+GNL EDVYMTQP+GF++P+ A K+CKLQ+SIYGLKQAS+SWN+ FD+V+K  G
Sbjct: 416 VKTAFLSGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVIKALG 475

Query: 367 FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
           F +NE+E C+YKK+NGS ++FLILYVDDILL+ NDIP LE+VK  L N+FS+KDLG+A+Y
Sbjct: 476 FVKNEEEPCVYKKINGSALMFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAY 535

Query: 547 ILGIKIYRDRSRRLLGLSQSTYIDK 621
           ILGI+IYRDRS+RL+GLSQSTYI+K
Sbjct: 536 ILGIRIYRDRSKRLIGLSQSTYINK 560



 Score = 89.0 bits (219), Expect(2) = 7e-75
 Identities = 42/64 (65%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
           FKK TD+DGNV  YK RL+AKGF +IQGV+ D+TFS V M+KSI I+LAIA Y DY+IWQ
Sbjct: 354 FKKKTDVDGNVHIYKARLVAKGFRQIQGVNYDETFSPVAMLKSIRIVLAIAAYFDYEIWQ 413

Query: 182 IMLK 193
           + +K
Sbjct: 414 MDVK 417


>AAV85747.1 Integrase core domain, putative [Oryza sativa Japonica Group]
            AAX92956.1 retrotransposon protein, putative, Ty1-copia
            sub-class [Oryza sativa Japonica Group] ABA92827.2
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1184

 Score =  221 bits (564), Expect(2) = 9e-75
 Identities = 107/149 (71%), Positives = 131/149 (87%)
 Frame = +1

Query: 184  HVKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*F 363
            +VKT FLNGNL EDVYMTQP+GF +P+ A K+CKL +SIYGLKQAS+SWN+ FD+VVK  
Sbjct: 777  YVKTAFLNGNLDEDVYMTQPKGFDDPQSAKKICKLHQSIYGLKQASRSWNIRFDEVVKAL 836

Query: 364  GFNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKAS 543
            GF +NE+E C+YKK++GS +VFLILYVDDILL+ NDI  LE+VK  L N+FS+KDLG+A+
Sbjct: 837  GFVRNEEEPCVYKKISGSALVFLILYVDDILLIGNDISMLESVKTSLKNSFSMKDLGEAA 896

Query: 544  YILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
            YILGI+IYRDRS+RL+GLSQSTYIDKVLK
Sbjct: 897  YILGIRIYRDRSKRLIGLSQSTYIDKVLK 925



 Score = 87.0 bits (214), Expect(2) = 9e-75
 Identities = 41/63 (65%), Positives = 50/63 (79%)
 Frame = +2

Query: 5   KKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQI 184
           KK TD+DGNV  YK RL+AKGF +IQGVD D+TFS V M+K I I+LAIA Y DY+IWQ+
Sbjct: 717 KKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKFIWIVLAIAAYFDYEIWQM 776

Query: 185 MLK 193
            +K
Sbjct: 777 YVK 779


>ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  220 bits (560), Expect(2) = 9e-75
 Identities = 105/148 (70%), Positives = 130/148 (87%)
 Frame = +1

Query: 187  VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
            VKT FLNGNL EDVYMTQP+GF++P+ A K+CKLQ+SIYGLKQAS+SWN+ FD+VVK  G
Sbjct: 830  VKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKALG 889

Query: 367  FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
            F +NE+  C+YKK++GS +VFLILYVDDILL+ NDIP LE+V   L N+FS+KDLG+A+Y
Sbjct: 890  FVKNEEVPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVNISLKNSFSMKDLGEAAY 949

Query: 547  ILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
            ILGI+IYRD S+RL+GLS+STYIDKVLK
Sbjct: 950  ILGIRIYRDGSKRLIGLSESTYIDKVLK 977



 Score = 88.6 bits (218), Expect(2) = 9e-75
 Identities = 42/64 (65%), Positives = 51/64 (79%)
 Frame = +2

Query: 2   FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
           FKK TD+DGNV  YK RL+AKGF +IQGVD D+TF  V M+KSI I+LAIA Y DY+IWQ
Sbjct: 768 FKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYEIWQ 827

Query: 182 IMLK 193
           + +K
Sbjct: 828 MDVK 831


>AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  220 bits (560), Expect(2) = 9e-75
 Identities = 105/148 (70%), Positives = 130/148 (87%)
 Frame = +1

Query: 187  VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
            VKT FLNGNL EDVYMTQP+GF++P+ A K+CKLQ+SIYGLKQAS+SWN+ FD+VVK  G
Sbjct: 772  VKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKALG 831

Query: 367  FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
            F +NE+  C+YKK++GS +VFLILYVDDILL+ NDIP LE+V   L N+FS+KDLG+A+Y
Sbjct: 832  FVKNEEVPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVNISLKNSFSMKDLGEAAY 891

Query: 547  ILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
            ILGI+IYRD S+RL+GLS+STYIDKVLK
Sbjct: 892  ILGIRIYRDGSKRLIGLSESTYIDKVLK 919



 Score = 88.6 bits (218), Expect(2) = 9e-75
 Identities = 42/64 (65%), Positives = 51/64 (79%)
 Frame = +2

Query: 2   FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
           FKK TD+DGNV  YK RL+AKGF +IQGVD D+TF  V M+KSI I+LAIA Y DY+IWQ
Sbjct: 710 FKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYEIWQ 769

Query: 182 IMLK 193
           + +K
Sbjct: 770 MDVK 773


>ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1073

 Score =  217 bits (553), Expect(2) = 9e-75
 Identities = 104/148 (70%), Positives = 130/148 (87%)
 Frame = +1

Query: 187  VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
            VKT FLNGN  EDVYMTQP+GF++ + A  +CKLQ+SIYGLKQAS+SWN+ FD++VK  G
Sbjct: 837  VKTAFLNGNHDEDVYMTQPKGFVDLQSAKMICKLQKSIYGLKQASRSWNIRFDELVKALG 896

Query: 367  FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
            F +NE+E C+YKK++GS +VFLILYVDDILL+ NDIP LE+VK  L N+FS+KDLG+A+Y
Sbjct: 897  FLKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAY 956

Query: 547  ILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
            ILGI+IYRDRS+RL+GLSQSTYIDK+LK
Sbjct: 957  ILGIRIYRDRSKRLIGLSQSTYIDKMLK 984



 Score = 91.3 bits (225), Expect(2) = 9e-75
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
           FKK TD+DGNV  YK RL+AKGF +IQGVD D+TFS V M+KSI I+LAIA Y DY+IWQ
Sbjct: 775 FKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQ 834

Query: 182 IMLK 193
           + +K
Sbjct: 835 MEVK 838


>AAR06328.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  217 bits (553), Expect(2) = 9e-75
 Identities = 104/148 (70%), Positives = 130/148 (87%)
 Frame = +1

Query: 187  VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
            VKT FLNGN  EDVYMTQP+GF++ + A  +CKLQ+SIYGLKQAS+SWN+ FD++VK  G
Sbjct: 827  VKTAFLNGNHDEDVYMTQPKGFVDLQSAKMICKLQKSIYGLKQASRSWNIRFDELVKALG 886

Query: 367  FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
            F +NE+E C+YKK++GS +VFLILYVDDILL+ NDIP LE+VK  L N+FS+KDLG+A+Y
Sbjct: 887  FLKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAY 946

Query: 547  ILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
            ILGI+IYRDRS+RL+GLSQSTYIDK+LK
Sbjct: 947  ILGIRIYRDRSKRLIGLSQSTYIDKMLK 974



 Score = 91.3 bits (225), Expect(2) = 9e-75
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
           FKK TD+DGNV  YK RL+AKGF +IQGVD D+TFS V M+KSI I+LAIA Y DY+IWQ
Sbjct: 765 FKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQ 824

Query: 182 IMLK 193
           + +K
Sbjct: 825 MEVK 828


>ABA97705.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 810

 Score =  217 bits (552), Expect(2) = 6e-74
 Identities = 104/148 (70%), Positives = 129/148 (87%)
 Frame = +1

Query: 187  VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
            VKT  LNGNL EDVYMTQP+GF++P+ A K+CKLQ+SIYGLK+AS+SWN+ FDKVVK  G
Sbjct: 613  VKTALLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKKASRSWNIRFDKVVKALG 672

Query: 367  FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
            F +NE+E C+YKK++GS +VFLILYVD+ILL+ NDIP LE+VK  L N+F +KDLG+ + 
Sbjct: 673  FVKNEEEPCVYKKISGSALVFLILYVDEILLIGNDIPMLESVKTSLKNSFLMKDLGEPTC 732

Query: 547  ILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
            ILGI+IYRDRS+RL+GLSQSTYIDKVLK
Sbjct: 733  ILGIRIYRDRSKRLIGLSQSTYIDKVLK 760



 Score = 89.0 bits (219), Expect(2) = 6e-74
 Identities = 42/64 (65%), Positives = 51/64 (79%)
 Frame = +2

Query: 2   FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
           FKK TD+DGNV  YK RL+AKGF +IQGVD D+TFS V M+KSI I+L IA Y DY+IWQ
Sbjct: 551 FKKNTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLTIAAYFDYEIWQ 610

Query: 182 IMLK 193
           + +K
Sbjct: 611 MDVK 614


>EXX50149.1 gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
          Length = 1303

 Score =  217 bits (552), Expect(2) = 6e-73
 Identities = 103/148 (69%), Positives = 124/148 (83%)
 Frame = +1

Query: 187  VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
            VKT FLNG L EDVYM QPEGF++ K  NKVCKL+RSIYGLKQAS+SWNL F + VK FG
Sbjct: 890  VKTAFLNGKLTEDVYMNQPEGFVDAKYPNKVCKLERSIYGLKQASRSWNLCFHEKVKEFG 949

Query: 367  FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
            F+++EDE C+Y K +GS V FL+LYVDDILLM NDIPTL+ VK WLG  F++KDLG+A+Y
Sbjct: 950  FSRSEDESCVYVKASGSIVTFLVLYVDDILLMGNDIPTLQDVKAWLGKCFAMKDLGEAAY 1009

Query: 547  ILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
            ILGI+I RDR +RL+GLSQ TY++KVLK
Sbjct: 1010 ILGIRILRDRKKRLIGLSQGTYLEKVLK 1037



 Score = 85.5 bits (210), Expect(2) = 6e-73
 Identities = 40/64 (62%), Positives = 50/64 (78%)
 Frame = +2

Query: 2    FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
            FKK TDMDG V T+K RL+AKGF +  GVD D+TFS V  +KSI I+LAIA +HDY+IWQ
Sbjct: 828  FKKKTDMDGKVHTFKARLVAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQ 887

Query: 182  IMLK 193
            + +K
Sbjct: 888  MDVK 891


>AAL83352.1 Putative polyprotein [Oryza sativa Japonica Group] AAN04499.1
           Putative polyprotein [Oryza sativa Japonica Group]
           AAP51930.1 retrotransposon protein, putative, Ty1-copia
           subclass [Oryza sativa Japonica Group]
          Length = 309

 Score =  211 bits (537), Expect(2) = 5e-72
 Identities = 103/149 (69%), Positives = 129/149 (86%)
 Frame = +1

Query: 184 HVKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*F 363
           +VK  FLNG+L EDVYMTQP+GF +P+ A K+CKL +SIYGLKQAS SW++ FD+VVK  
Sbjct: 93  NVKIAFLNGDLNEDVYMTQPKGFGDPQSAKKICKLHKSIYGLKQASWSWDIRFDEVVKAL 152

Query: 364 GFNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKAS 543
           GF +NE+E  +YKK++G+ +VFLILYVDDILL+ NDIP LE+VK  L N+FS+KDLG+A+
Sbjct: 153 GFVKNEEEPRVYKKISGNALVFLILYVDDILLIGNDIPMLESVKTSLKNSFSVKDLGEAA 212

Query: 544 YILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
           YILGI+IYRDRS+RL+GLSQSTYIDKVLK
Sbjct: 213 YILGIRIYRDRSKRLIGLSQSTYIDKVLK 241



 Score = 88.2 bits (217), Expect(2) = 5e-72
 Identities = 41/64 (64%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
           FKK TD+DGN+Q YK RL+AKGF +IQGVD D+TFS V M+KSI I+LAIA Y +Y+IW 
Sbjct: 32  FKKKTDVDGNIQIYKTRLVAKGFRQIQGVDYDETFSPVTMLKSIQIVLAIAAYFNYEIWL 91

Query: 182 IMLK 193
           + +K
Sbjct: 92  VNVK 95


>ADB85411.1 putative retrotransposon protein [Phyllostachys edulis]
          Length = 566

 Score =  223 bits (568), Expect(2) = 1e-71
 Identities = 110/148 (74%), Positives = 128/148 (86%)
 Frame = +1

Query: 187 VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
           VK  FLNGNL EDVYMTQPE F++ KEA KVCKL +SIYGLKQAS+SWN+ FD+VVK F 
Sbjct: 368 VKMAFLNGNLSEDVYMTQPESFVDLKEARKVCKLNKSIYGLKQASRSWNIRFDEVVKGFD 427

Query: 367 FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
           F +NE+E C+YKKV+GS +VFLILYVDDILL+ENDIP LE+VK  L N+FS+KDLG ASY
Sbjct: 428 FIKNEEEPCVYKKVSGSKLVFLILYVDDILLVENDIPMLESVKTSLRNSFSIKDLGDASY 487

Query: 547 ILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
           ILGI+IYRDRS+RL+GLSQ  YIDKVLK
Sbjct: 488 ILGIRIYRDRSKRLIGLSQDMYIDKVLK 515



 Score = 75.1 bits (183), Expect(2) = 1e-71
 Identities = 37/63 (58%), Positives = 47/63 (74%)
 Frame = +2

Query: 5   KKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQI 184
           +K  DMD NV  +K RL+AKGF +IQ VD D+ FS V M++SI IILAIA Y DY+IWQ+
Sbjct: 307 RKTIDMDENVHVHKARLVAKGFKQIQCVDYDEAFSPVAMLESIPIILAIAAYFDYEIWQM 366

Query: 185 MLK 193
            +K
Sbjct: 367 DVK 369


>AAC26250.1 contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] CAB80804.1 putative
           retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  214 bits (545), Expect(2) = 1e-70
 Identities = 101/147 (68%), Positives = 123/147 (83%)
 Frame = +1

Query: 187 VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
           VKT FLNGNL E VYMTQPEGF  P+ A KVCKL RSIYGLKQAS+SWNL F++ +K F 
Sbjct: 554 VKTAFLNGNLEEHVYMTQPEGFTVPEAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFD 613

Query: 367 FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
           F +NE+E C+YKK +GS V FL+LYVDDILL+ NDIP L++VK WLG+ FS+KD+G+A+Y
Sbjct: 614 FIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAY 673

Query: 547 ILGIKIYRDRSRRLLGLSQSTYIDKVL 627
           ILGI+IYRDR  +++GLSQ TYIDKVL
Sbjct: 674 ILGIRIYRDRLNKIIGLSQDTYIDKVL 700



 Score = 80.5 bits (197), Expect(2) = 1e-70
 Identities = 35/64 (54%), Positives = 50/64 (78%)
 Frame = +2

Query: 2   FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
           FKK  DMDGN+Q YK  L+AKG+ ++ G+D D+T+S V M+KSI I+LA A ++DY+IWQ
Sbjct: 492 FKKKIDMDGNIQIYKAGLVAKGYKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQ 551

Query: 182 IMLK 193
           + +K
Sbjct: 552 MDVK 555


>KYP68472.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 676

 Score =  216 bits (549), Expect(2) = 1e-70
 Identities = 101/148 (68%), Positives = 127/148 (85%)
 Frame = +1

Query: 187 VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
           VKTTFLNG L EDVYMTQPEGFI   + +KVCKL+RSIYGLKQAS+SWN+ F+K +K F 
Sbjct: 453 VKTTFLNGELKEDVYMTQPEGFITSSDHHKVCKLERSIYGLKQASRSWNIQFNKTIKNFD 512

Query: 367 FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
           F + E+E C+YK+V+GST++FL+LYVDDILL+ NDIP+L++ K WL   FS+KDLG+A+Y
Sbjct: 513 FVRCEEEPCVYKRVSGSTIIFLMLYVDDILLIGNDIPSLQSTKIWLSEQFSMKDLGEAAY 572

Query: 547 ILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
           ILGIKIYRDRS+R+LGLSQS YI+ +LK
Sbjct: 573 ILGIKIYRDRSKRMLGLSQSMYINTILK 600



 Score = 79.0 bits (193), Expect(2) = 1e-70
 Identities = 35/64 (54%), Positives = 50/64 (78%)
 Frame = +2

Query: 2   FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
           +KK    DG V+TYK RL+AKG+ + +G+D D+TFS + M+KSI I+LAIA Y+DY+IWQ
Sbjct: 391 YKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPMAMLKSIRILLAIAAYYDYEIWQ 450

Query: 182 IMLK 193
           + +K
Sbjct: 451 MDVK 454


>ABA99022.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 829

 Score =  204 bits (518), Expect(2) = 2e-69
 Identities = 98/138 (71%), Positives = 121/138 (87%)
 Frame = +1

Query: 187  VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
            VKTTFLNGNL EDVYMTQP+GF++P+ A K+CKLQ+SIYGLKQAS+SWN+ FD+VVK   
Sbjct: 692  VKTTFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKALR 751

Query: 367  FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
            F +NE+E C+YKK++GS +VFLILYVDDILL+ NDI  LE+VK  L N FS+KDLG+A+Y
Sbjct: 752  FVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDILMLESVKTSLKNRFSMKDLGEAAY 811

Query: 547  ILGIKIYRDRSRRLLGLS 600
            ILGI+IYRDRS+RL+GLS
Sbjct: 812  ILGIRIYRDRSKRLIGLS 829



 Score = 87.0 bits (214), Expect(2) = 2e-69
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = +2

Query: 2   FKKMTDMDGNVQTYKGRLIAKGFHKIQGVDSDKTFSQVVMVKSIGIILAIAFYHDYKIWQ 181
           FKK TD+DGNV  YK RL+AKGF +IQGVD D+TFS   M+KSI I+LAIA Y +Y+IWQ
Sbjct: 630 FKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPFAMLKSIRIVLAIAAYFNYEIWQ 689

Query: 182 IMLK 193
           + +K
Sbjct: 690 MDVK 693


>AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] ABA93176.1 retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 938

 Score =  232 bits (591), Expect = 2e-67
 Identities = 109/148 (73%), Positives = 134/148 (90%)
 Frame = +1

Query: 187  VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
            VKT FLNGNL EDVYMTQP+GF++P+ A K+CKLQ+SIYGLKQAS+SWN+HFD++VK  G
Sbjct: 626  VKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIHFDEIVKALG 685

Query: 367  FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
            F +NE E C+YKK++GS +VFLILYVDDILL+ENDIP LE+VK  L N+FS+KDLG+A+Y
Sbjct: 686  FVKNEQEPCVYKKISGSALVFLILYVDDILLIENDIPMLESVKTSLKNSFSMKDLGEAAY 745

Query: 547  ILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
            ILGI+IY+DRS+RL+GLSQSTYIDKVLK
Sbjct: 746  ILGIRIYKDRSKRLIGLSQSTYIDKVLK 773


>AAK52163.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 637

 Score =  226 bits (575), Expect = 5e-67
 Identities = 108/148 (72%), Positives = 133/148 (89%)
 Frame = +1

Query: 187 VKTTFLNGNLLEDVYMTQPEGFINPKEANKVCKLQRSIYGLKQASQSWNLHFDKVVK*FG 366
           VKT FLNGNL EDVYMTQP+GF++P+ A ++CKLQ+SIYGLKQAS+SW + FD+VVK  G
Sbjct: 272 VKTAFLNGNLDEDVYMTQPKGFVDPQSAKRICKLQKSIYGLKQASRSWKICFDEVVKVLG 331

Query: 367 FNQNEDEHCIYKKVNGSTVVFLILYVDDILLMENDIPTLETVKCWLGNTFSLKDLGKASY 546
           F +NE+E C+YKK++GST+VFLILYVDDILL+ NDIP LE+VK  L N+FS+KDLG+A+Y
Sbjct: 332 FVKNEEEPCVYKKISGSTLVFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAY 391

Query: 547 ILGIKIYRDRSRRLLGLSQSTYIDKVLK 630
           ILGI+IYRDRS+RL+GLSQSTYIDKVLK
Sbjct: 392 ILGIRIYRDRSKRLIGLSQSTYIDKVLK 419