BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00021132
         (1108 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP30912.1 Retrovirus-related Pol polyprotein from transposon TN...   300   e-115
KYP46031.1 Retrovirus-related Pol polyprotein from transposon TN...   302   e-112
KYP38726.1 Retrovirus-related Pol polyprotein from transposon TN...   299   e-112
KYP32982.1 Retrovirus-related Pol polyprotein from transposon TN...   299   e-111
KYP78729.1 Retrovirus-related Pol polyprotein from transposon TN...   297   e-111
CAN64335.1 hypothetical protein VITISV_001808 [Vitis vinifera]        284   e-110
KYP47407.1 Retrovirus-related Pol polyprotein from transposon TN...   295   e-110
KYP33441.1 Retrovirus-related Pol polyprotein from transposon TN...   296   e-109
KYP50151.1 Retrovirus-related Pol polyprotein from transposon TN...   300   e-109
KYP36435.1 Retrovirus-related Pol polyprotein from transposon TN...   296   e-109
KYP33249.1 Retrovirus-related Pol polyprotein from transposon TN...   294   e-109
KYP35263.1 Retrovirus-related Pol polyprotein from transposon TN...   292   e-108
KYP33754.1 Retrovirus-related Pol polyprotein from transposon TN...   290   e-107
KYP64004.1 Retrovirus-related Pol polyprotein from transposon TN...   288   e-106
KYP53827.1 Retrovirus-related Pol polyprotein from transposon TN...   285   e-105
KYP66812.1 Retrovirus-related Pol polyprotein from transposon TN...   283   e-105
AAO73529.1 gag-pol polyprotein [Glycine max]                          286   e-101
KYP70668.1 Retrovirus-related Pol polyprotein from transposon TN...   286   e-101
AAO73523.1 gag-pol polyprotein [Glycine max]                          286   e-101
AAO73521.1 gag-pol polyprotein [Glycine max]                          286   e-101

>KYP30912.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 766

 Score =  300 bits (769), Expect(2) = e-115
 Identities = 160/275 (58%), Positives = 200/275 (72%), Gaps = 17/275 (6%)
 Frame = +3

Query: 324  SIHITFHEELQYENLEIVDLTHQFENLNI-PNDSEKDTT----------NNNQAETQPIP 470
            SIH+ F+++ + +  E+ DL   F  + +  +DS KD             N +++T  IP
Sbjct: 199  SIHVKFNDKKETDR-ELSDLEDDFAGMELNTHDSRKDEQVSEASSEPLQTNVESQTDMIP 257

Query: 471  ------RLIKDHPQELIIGNPNDKVKTRSSFKDVANMAFVSIIEPKKISEALKDDYWIIA 632
                  R    HP+E IIG+ ++ VKTRS F+ + ++A +S IEPK I EAL D+ WI+A
Sbjct: 258  PHKSEWRYKSHHPKEQIIGSTSEGVKTRSKFRHLNSLALLSEIEPKSIDEALHDEGWILA 317

Query: 633  MQEELNQFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGI 812
            MQEELNQF ++DVW LVPKP  KTIIGTKWVFRNKL+E G+VIRNKARLVAQGYNQQEGI
Sbjct: 318  MQEELNQFARSDVWTLVPKPHGKTIIGTKWVFRNKLSEEGKVIRNKARLVAQGYNQQEGI 377

Query: 813  DFDETYAPVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEK 992
            DF ET+APVARLEAIR+LL+ A +  IKLYQMDVKSAFLNG+I+EEV+V QPPGFE    
Sbjct: 378  DFTETFAPVARLEAIRILLSYAVNNGIKLYQMDVKSAFLNGLIEEEVFVRQPPGFEDVAF 437

Query: 993  GDYVYKLKKALYGLKQAPRNWYERLKTYLFDNGFS 1097
             ++V KLKKALYGLKQAPR WY+RL ++L  N FS
Sbjct: 438  PEHVCKLKKALYGLKQAPRAWYDRLSSFLATNEFS 472



 Score =  144 bits (364), Expect(2) = e-115
 Identities = 65/109 (59%), Positives = 84/109 (77%)
 Frame = +1

Query: 1   LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
           LQEM RTM+   N P++FWAEA+NTACY+ NR+ V   LK+TPYE+   +KP + YFH F
Sbjct: 92  LQEMGRTMLNSCNLPRSFWAEAINTACYLQNRILVRPILKRTPYELWKGRKPNISYFHPF 151

Query: 181 GSTCYILNTKDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
           G  C+ILNTKDD +KFD+KS K FF+GYS +SKA+RVYN+ +  VEES+
Sbjct: 152 GCECFILNTKDDLEKFDAKSDKGFFIGYSETSKAYRVYNSRTLVVEESI 200


>KYP46031.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 772

 Score =  302 bits (774), Expect(2) = e-112
 Identities = 157/271 (57%), Positives = 204/271 (75%), Gaps = 11/271 (4%)
 Frame = +3

Query: 324  SIHITFHEELQYEN--LEIVDLTHQFENL---NIPNDSEKDTTNNNQAET--QPIP---R 473
            S+H+ F E  + E    EI DLT   +     N PN+  K++ ++ +A+   + +P   R
Sbjct: 403  SVHVVFDESNKQETRQTEIEDLTELLDQSLLENEPNEVPKESESHEKAKETCEQLPKEWR 462

Query: 474  LIKDHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQEELN 650
              +D   + IIGN    V TRS+ K++ N MAFVS +EPK I EALKD++W++AMQEELN
Sbjct: 463  TSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAMQEELN 522

Query: 651  QFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETY 830
            QF +N+VWDLVP P+D  IIGTKWVFRNKL+E+G ++RNKARLVA+GYNQ+EGID+DET+
Sbjct: 523  QFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGIDYDETF 582

Query: 831  APVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYK 1010
            APVAR+EAIR+LLA ++ KN KLYQMDVKSAFLNG+IQEEVYV QPPGF   +  ++VYK
Sbjct: 583  APVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNPNHVYK 642

Query: 1011 LKKALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            LKKALYGLKQAPR+WY+RL  +L +N +  G
Sbjct: 643  LKKALYGLKQAPRSWYDRLSKFLIENDYERG 673



 Score =  134 bits (336), Expect(2) = e-112
 Identities = 62/110 (56%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
           L+E+ARTM+ E N PK FWA+A+NTAC+VLN+V +   LKKTPYEI + +KP + YF  F
Sbjct: 295 LEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIYNGRKPNISYFRVF 354

Query: 181 GSTCYILNT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
           G  CY+LN  K+   KFD+K+ +A FLGYST+SKA+R+YN  +  VEES+
Sbjct: 355 GCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESV 404


>KYP38726.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 749

 Score =  299 bits (766), Expect(2) = e-112
 Identities = 156/271 (57%), Positives = 203/271 (74%), Gaps = 11/271 (4%)
 Frame = +3

Query: 324  SIHITFHEELQYEN--LEIVDLTHQFENL---NIPNDSEKDTTNNNQAET--QPIPRLIK 482
            S+H+ F E  + E    EI DL    +     N PN+  K++ ++ +A+   + +P+  K
Sbjct: 142  SVHVVFDESNKQETRQTEIEDLNELLDQSLLENEPNEVPKESESHEKAKETCEQLPKEWK 201

Query: 483  ---DHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQEELN 650
               D   + IIGN    V TRS+ K++ N MAFVS +EPK I EALKD++W++AMQEELN
Sbjct: 202  TSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAMQEELN 261

Query: 651  QFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETY 830
            QF +N+VWDLVP P+D  IIGTKWVFRNKL+E+G ++RNKARLVA+GYNQ+EGID+DET+
Sbjct: 262  QFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGIDYDETF 321

Query: 831  APVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYK 1010
            APVAR+EAIR+LLA ++ KN KLYQMDVKSAFLNG+IQEEVYV QPPGF   +  ++VYK
Sbjct: 322  APVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNPNHVYK 381

Query: 1011 LKKALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            LKKALYGLKQAPR+WY+RL  +L +N +  G
Sbjct: 382  LKKALYGLKQAPRSWYDRLSKFLIENDYERG 412



 Score =  134 bits (337), Expect(2) = e-112
 Identities = 63/110 (57%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
           L+E+ARTM+ E N PK FWA+A+NTAC+VLN+V +   LKKTPYEI   KKP + YF  F
Sbjct: 34  LEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIYKGKKPNISYFRVF 93

Query: 181 GSTCYILNT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
           G  CY+LN  K+   KFD+K+ +A FLGYST+SKA+R+YN  +  VEES+
Sbjct: 94  GCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESV 143


>KYP32982.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1533

 Score =  299 bits (765), Expect(2) = e-111
 Identities = 156/271 (57%), Positives = 203/271 (74%), Gaps = 11/271 (4%)
 Frame = +3

Query: 324  SIHITFHEELQYEN--LEIVDLTHQFENL---NIPNDSEKDTTNN-NQAET-QPIPR--- 473
            S+H+ F E  + E    E+ DLT   +     N PND  K++ ++  Q ET + +P+   
Sbjct: 926  SVHVVFDESNKQETRQTEVEDLTELLDQSLLENEPNDVSKESESHVKQKETCEQLPKEWK 985

Query: 474  LIKDHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQEELN 650
              +D   + IIG+    V TRS+ K++ N MAFVS +EPK I EALKD++W++AMQEELN
Sbjct: 986  TTRDLSMDNIIGSIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAMQEELN 1045

Query: 651  QFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETY 830
            QF +N+VWDLVP P+D  IIGTKWVFRNKL+E+G ++RNKARLVA+GYNQ+EGID+DET+
Sbjct: 1046 QFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGIDYDETF 1105

Query: 831  APVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYK 1010
            APVAR+EAIR+LLA +  +N KLYQMDVKSAFLNG+IQEEVYV QPPGF   +  ++VYK
Sbjct: 1106 APVARIEAIRLLLAYSTIRNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNPNHVYK 1165

Query: 1011 LKKALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            LKKALYGLKQAPR+WY+RL  +L +N +  G
Sbjct: 1166 LKKALYGLKQAPRSWYDRLSKFLIENDYERG 1196



 Score =  134 bits (337), Expect(2) = e-111
 Identities = 63/110 (57%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1    LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
            L+E+ARTM+ E N PK FWA+A+NTAC+VLN+V +   LKKTPYEI   KKP + YF  F
Sbjct: 818  LEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIYKGKKPNISYFRVF 877

Query: 181  GSTCYILNT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
            G  CY+LN  K+   KFD+K+ +A FLGYST+SKA+R+YN  +  VEES+
Sbjct: 878  GCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESV 927


>KYP78729.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1564

 Score =  297 bits (761), Expect(2) = e-111
 Identities = 156/271 (57%), Positives = 201/271 (74%), Gaps = 11/271 (4%)
 Frame = +3

Query: 324  SIHITFHEELQYEN--LEIVDLTHQFENL---NIPNDSEKDTTNNNQAET--QPIPRLIK 482
            S+H+ F E  + E    EI DL    +     N PN+  K++ +  +A+   + +P+  K
Sbjct: 957  SVHVVFDESNKQETRQTEIEDLNELLDQSLLENEPNEVPKESESLEKAKETCEQLPKEWK 1016

Query: 483  ---DHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQEELN 650
               D   + IIGN    V TRS+ K++ N MAFVS +EPK I EALKD++W++AMQEELN
Sbjct: 1017 TSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAMQEELN 1076

Query: 651  QFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETY 830
            QF +N+VWDLVP P+D  IIGTKWVFRNKL+E+G ++RNKARLVA+GYNQ+EGID+DET+
Sbjct: 1077 QFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGIDYDETF 1136

Query: 831  APVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYK 1010
            APVAR+EAIR+LLA ++ KN KLYQMDVKSAFLNG IQEEVYV QPPGF   +  ++VYK
Sbjct: 1137 APVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGFIQEEVYVEQPPGFVDYKNPNHVYK 1196

Query: 1011 LKKALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            LKKALYGLKQAPR+WY+RL  +L +N +  G
Sbjct: 1197 LKKALYGLKQAPRSWYDRLSKFLIENDYERG 1227



 Score =  134 bits (337), Expect(2) = e-111
 Identities = 63/110 (57%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1    LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
            L+E+ARTM+ E N PK FWA+A+NTAC+VLN+V +   LKKTPYEI   KKP + YF  F
Sbjct: 849  LEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIYKGKKPNISYFRVF 908

Query: 181  GSTCYILNT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
            G  CY+LN  K+   KFD+K+ +A FLGYST+SKA+R+YN  +  VEES+
Sbjct: 909  GCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESV 958


>CAN64335.1 hypothetical protein VITISV_001808 [Vitis vinifera]
          Length = 1885

 Score =  284 bits (726), Expect(2) = e-110
 Identities = 140/248 (56%), Positives = 186/248 (75%), Gaps = 16/248 (6%)
 Frame = +3

Query: 408  IPNDSEKDTTNNNQAETQPIPR---------------LIKDHPQELIIGNPNDKVKTRSS 542
            +P ++ K  T +N+ + + IPR                + +HPQ+ IIGNP   V+TRSS
Sbjct: 888  LPWENCKLRTKDNKKKVERIPRKKNHLWHYLLLNKCKFVINHPQDQIIGNPLSGVRTRSS 947

Query: 543  FKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQEELNQFTKNDVWDLVPKPQDKTIIGTK 719
             +++ N +AF+S IEPK I +A+ D+ W+IAMQ+ELNQF +++VW+LVP+P ++++IGTK
Sbjct: 948  LRNICNNLAFISQIEPKNIKDAIVDENWMIAMQKELNQFERSEVWELVPRPSNQSVIGTK 1007

Query: 720  WVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETYAPVARLEAIRMLLAIAAHKNIKL 899
            WVFRNK++E G ++RNKARLVAQGYNQ+EGID++ET+APVARLEAIRMLLA A  K+  L
Sbjct: 1008 WVFRNKMDENGIIVRNKARLVAQGYNQEEGIDYEETFAPVARLEAIRMLLAFACFKDFIL 1067

Query: 900  YQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYKLKKALYGLKQAPRNWYERLKTYL 1079
            YQMDVKSAFLNG I EE+YV QPPGF+     ++V+KLKKALYGLKQAPR WYERL  +L
Sbjct: 1068 YQMDVKSAFLNGFINEEIYVEQPPGFQSFNFPNHVFKLKKALYGLKQAPRAWYERLSKFL 1127

Query: 1080 FDNGFSIG 1103
                F +G
Sbjct: 1128 LKKSFKMG 1135



 Score =  145 bits (367), Expect(2) = e-110
 Identities = 69/109 (63%), Positives = 84/109 (77%)
 Frame = +1

Query: 1    LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
            LQEMARTM+ E+N PK FWAEA+NT+CYVLNR+ +   LKKTPYE+  +KKP + YF  F
Sbjct: 775  LQEMARTMLNENNLPKYFWAEAINTSCYVLNRILLRPILKKTPYELWKNKKPNISYFKVF 834

Query: 181  GSTCYILNTKDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
            G  C+ILNTKD+  KFD+KS    FLGYSTSSKAFRV+N  +  VEES+
Sbjct: 835  GCKCFILNTKDNLGKFDAKSDVGIFLGYSTSSKAFRVFNKRTMVVEESI 883


>KYP47407.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1569

 Score =  295 bits (756), Expect(2) = e-110
 Identities = 153/271 (56%), Positives = 202/271 (74%), Gaps = 11/271 (4%)
 Frame = +3

Query: 324  SIHITFHEELQYEN--LEIVDLTHQFENLNI---PNDSEKDTTNNNQAET--QPIPRLIK 482
            S+H+ F E  + E    EI DL    +   +   PN+  K++ ++ + +   + +P+  K
Sbjct: 962  SVHVVFDESNKQETRQTEIEDLNELLDQPLLESEPNEKSKESVSHEKEKVTCEQLPKEWK 1021

Query: 483  DHPQ---ELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQEELN 650
               +   + IIGN    V TRS+ K++ N MAFVS +EPK I EALKD++W++AMQEELN
Sbjct: 1022 TSRELSIDNIIGNIGKGVTTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAMQEELN 1081

Query: 651  QFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETY 830
            QF +N+VWDLVP P+D  IIGTKWVFRNKL+E+G ++RNKARLVA+GYNQ+EGID+DET+
Sbjct: 1082 QFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGIDYDETF 1141

Query: 831  APVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYK 1010
            APVAR+EAIR+LLA ++ KN KLYQMDVKSAFLNG+IQEEVYV QPPGF   +  ++VYK
Sbjct: 1142 APVARIEAIRLLLAYSSIKNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNPNHVYK 1201

Query: 1011 LKKALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            LKKALYGLKQAPR+WY+RL  +L +N +  G
Sbjct: 1202 LKKALYGLKQAPRSWYDRLSKFLIENDYERG 1232



 Score =  134 bits (337), Expect(2) = e-110
 Identities = 63/110 (57%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1    LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
            L+E+ARTM+ E N PK FWA+A+NTAC+VLNRV +   LKKTPYEI   KKP + YF  F
Sbjct: 854  LEELARTMLNETNLPKYFWADAINTACHVLNRVLIRPILKKTPYEIYKGKKPNISYFRVF 913

Query: 181  GSTCYILNT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
            G  CY+LN  K+   KFD+K+ +A FLGYST+SK++R+YN  +  VEES+
Sbjct: 914  GCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKSYRIYNKRTLVVEESV 963


>KYP33441.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1470

 Score =  296 bits (759), Expect(2) = e-109
 Identities = 157/271 (57%), Positives = 196/271 (72%), Gaps = 11/271 (4%)
 Frame = +3

Query: 324  SIHITFHEELQYEN--LEIVDLTH-------QFENLNIPNDSEKDTTNNNQAETQPIP-R 473
            S+H+ F E  + E    EI DLT        + E  N P +SE        +E  P   +
Sbjct: 957  SVHVVFDESNKQETRQTEIEDLTDLLDQPLLESETNNKPKESESHENTKETSEQLPKEWK 1016

Query: 474  LIKDHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQEELN 650
              +D   + IIGN    V TRS+ K++ N MAFVS +EPK I EALKD++W++AMQEELN
Sbjct: 1017 TSRDLSIDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAMQEELN 1076

Query: 651  QFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETY 830
            QF +N+VWDLVP P D  IIGTKWVFRNKL+E+G +IRNKARLVA+GYNQ+EGID+DET+
Sbjct: 1077 QFERNEVWDLVPLPTDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETF 1136

Query: 831  APVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYK 1010
            APVAR+EAIR+LLA ++  N KLYQMDVKSAFLNG+IQEEVYV QPPGF   +  ++VYK
Sbjct: 1137 APVARIEAIRLLLAYSSIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNPNHVYK 1196

Query: 1011 LKKALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            LKKALYGLKQAPR+WY+RL  +L +N +  G
Sbjct: 1197 LKKALYGLKQAPRSWYDRLSKFLIENDYVRG 1227



 Score =  130 bits (326), Expect(2) = e-109
 Identities = 60/110 (54%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1    LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
            L+E+ARTM+ E   PK FWA+A+NTAC+VLN+V +   LKKTPYEI + +KP + YF  F
Sbjct: 849  LEELARTMLNETKLPKYFWADAINTACHVLNKVLIRPILKKTPYEIYNGRKPNISYFRVF 908

Query: 181  GSTCYILNT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
            G  C++LN  K+   KFD+K+ +A FLGYST+SKA+R+YN  +  VEES+
Sbjct: 909  GCKCFVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESV 958


>KYP50151.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1006

 Score =  300 bits (767), Expect(2) = e-109
 Identities = 154/269 (57%), Positives = 200/269 (74%), Gaps = 9/269 (3%)
 Frame = +3

Query: 324  SIHITFHEELQYENLEIVDLTHQFENLNI---PNDSEKDTTNNNQAETQPIP-----RLI 479
            S+H+ F E    +  EI DLT   +   +   PN+  K++  + +A    +      +  
Sbjct: 403  SVHVVFDES--NKQTEIEDLTELLDQPLLESEPNEKSKESEPHEKARETCVQLPKEWKAS 460

Query: 480  KDHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQEELNQF 656
            +D   + IIGN    V TRS+ K++ N MAFVS +EPK I EALKD++W++AMQEELNQF
Sbjct: 461  RDLSMDNIIGNIGKGVTTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAMQEELNQF 520

Query: 657  TKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETYAP 836
             +N+VWDLVP P+D  IIGTKWVFRNKL+E+G ++RNKARLVA+GYNQ+EGID+DET+AP
Sbjct: 521  ERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGIDYDETFAP 580

Query: 837  VARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYKLK 1016
            VAR+EAIR+LLA ++ KN KLYQMDVKSAFLNG+IQEEVYV QPPGFE  +  ++VYKLK
Sbjct: 581  VARIEAIRLLLAYSSLKNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFEDFKNPNHVYKLK 640

Query: 1017 KALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            KALYGLKQAPR+WY+RL  +L +N +  G
Sbjct: 641  KALYGLKQAPRSWYDRLSKFLIENDYERG 669



 Score =  127 bits (318), Expect(2) = e-109
 Identities = 58/110 (52%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
           L+E+ARTM+ + N PK FWA+A+NT+C+VLN+V +   LKK PYEI   KKP + YF  F
Sbjct: 295 LEELARTMLNKTNLPKYFWADAINTSCHVLNKVLIRPILKKIPYEIYKGKKPNISYFRVF 354

Query: 181 GSTCYILNTKDDR-DKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
           G  CY+LN  +++  KFD+K+ +A FLGYST+SK++R+YN  +  VEES+
Sbjct: 355 GCKCYVLNNGNEQLGKFDAKADEAIFLGYSTNSKSYRIYNKRTLVVEESV 404


>KYP36435.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 963

 Score =  296 bits (758), Expect(2) = e-109
 Identities = 158/271 (58%), Positives = 197/271 (72%), Gaps = 11/271 (4%)
 Frame = +3

Query: 324  SIHITFHEELQYEN--LEIVDLTH-------QFENLNIPNDSEKDTTNNNQAETQPIP-R 473
            S+HI F E  + E    EI DLT        + E    P +SE + T  N +E  P   +
Sbjct: 372  SVHIVFDETNKQETKQTEIEDLTDLLDQPLLESEPNEKPKESESNETTENTSEQLPKEWK 431

Query: 474  LIKDHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQEELN 650
              +D   E IIGN    V TR + K++ N MAFVS +EPK I EAL+D++W++AMQEELN
Sbjct: 432  TSRDLSMENIIGNIGKGVSTRRAIKNICNVMAFVSQVEPKTIDEALQDEHWLMAMQEELN 491

Query: 651  QFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETY 830
            QF +N+VWDLVP P D  IIGTKWVFRNKL+E+G +IRNKARLVA+GYNQ+EGID+DET+
Sbjct: 492  QFERNEVWDLVPLPTDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETF 551

Query: 831  APVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYK 1010
            APVAR+EAIR+LLA ++  N KLYQMDVKSAFLNG+IQEEVYV QPPGF   +  ++VYK
Sbjct: 552  APVARIEAIRLLLAYSSIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKYPNHVYK 611

Query: 1011 LKKALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            LKKALYGLKQAPR+WY+RL  +L +N +  G
Sbjct: 612  LKKALYGLKQAPRSWYDRLSKFLIENDYVRG 642



 Score =  130 bits (326), Expect(2) = e-109
 Identities = 61/110 (55%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
           L+E+ARTM+ E   PK FWA+A+NTAC+VLN+V +   LKKTPYEI + +KP + YF  F
Sbjct: 264 LEELARTMLNETKLPKYFWADAINTACHVLNKVLIRPILKKTPYEIYNGRKPNISYFRVF 323

Query: 181 GSTCYILNT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
           G  C++LN  K+   KFD+K+ +A FLGYST+SKA+RVYN  +  VEES+
Sbjct: 324 GCKCFVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRVYNKRTLIVEESV 373


>KYP33249.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1010

 Score =  294 bits (753), Expect(2) = e-109
 Identities = 159/271 (58%), Positives = 194/271 (71%), Gaps = 11/271 (4%)
 Frame = +3

Query: 324  SIHITFHEELQYEN--LEIVDLTH-------QFENLNIPNDSEKDTTNNNQAETQPIP-R 473
            S+H+ F E  + E    EI DLT        + E    P +SE   T    +E  P   +
Sbjct: 403  SVHVVFDETNKQETKKTEIEDLTDFLDQPPLESEPSEKPKESESIETTKKTSEQLPKEWK 462

Query: 474  LIKDHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQEELN 650
              KD   E IIGN    V TR S K++ N MAFVS +EPK I EAL D++W++AMQEELN
Sbjct: 463  TSKDLSIENIIGNIGKGVSTRRSIKNICNTMAFVSQVEPKTIDEALHDEHWLMAMQEELN 522

Query: 651  QFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETY 830
            QF +N+VWDLVP P D  IIGTKWVFRNKL+E+G +IRNKARLVA+GYNQ+EGID+DET+
Sbjct: 523  QFERNEVWDLVPLPSDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETF 582

Query: 831  APVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYK 1010
            APVAR+EAIR+LLA A+  N KLYQMDVKSAFLNG+IQEEVYV QPPGF   +  ++VYK
Sbjct: 583  APVARIEAIRLLLAYASIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKYPNHVYK 642

Query: 1011 LKKALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            LKKALYGLKQAPR+WY+RL  +L +N +  G
Sbjct: 643  LKKALYGLKQAPRSWYDRLSKFLIENDYVRG 673



 Score =  129 bits (324), Expect(2) = e-109
 Identities = 60/110 (54%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
           L+E+ARTM+ E   PK FWA+A+NTAC+VLN+V +   LK+TPYEI + +KP + YF  F
Sbjct: 295 LEELARTMLNETKLPKYFWADAINTACHVLNKVLIRPILKRTPYEIYNGRKPNISYFRVF 354

Query: 181 GSTCYILNT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
           G  C++LN  K+   KFD+K+ +A FLGYST+SKA+RVYN  +  VEES+
Sbjct: 355 GCKCFVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRVYNKRTLVVEESV 404


>KYP35263.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 570

 Score =  292 bits (747), Expect(2) = e-108
 Identities = 155/271 (57%), Positives = 195/271 (71%), Gaps = 11/271 (4%)
 Frame = +3

Query: 324  SIHITFHEELQYEN--LEIVDLTH-------QFENLNIPNDSEKDTTNNNQAETQPIP-R 473
            S+H+ F E  + E    EI DLT        + E  N P +SE        +E  P   +
Sbjct: 157  SVHVVFDESNKQETRQTEIEDLTDLLDQPLLESETNNKPKESESHENTKETSEQLPKEWK 216

Query: 474  LIKDHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQEELN 650
              +D   + IIGN    V TRS+ K++ N MAFVS +EPK I EALKD++W++AMQEELN
Sbjct: 217  TSRDLSIDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAMQEELN 276

Query: 651  QFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETY 830
            QF +N+VWDLVP P+D  IIGTKWVFRNKL+E+G +IRNKARLVA+GYNQ+EGID+DET+
Sbjct: 277  QFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIIIRNKARLVAKGYNQEEGIDYDETF 336

Query: 831  APVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYK 1010
            APVAR+EAIR+LLA ++  N KLYQMDVKSAFLNG+IQEEVYV QPPGF   +  ++VYK
Sbjct: 337  APVARIEAIRLLLAYSSIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNPNHVYK 396

Query: 1011 LKKALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            LKKAL  LKQAPR+WY+RL  +L +N +  G
Sbjct: 397  LKKALCDLKQAPRSWYDRLSKFLIENDYERG 427



 Score =  130 bits (326), Expect(2) = e-108
 Identities = 60/110 (54%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
           L+E+ARTM+ E   PK FWA+A+NTAC+VLN+V +   LKKTPYEI + +KP + YF  F
Sbjct: 49  LEELARTMLNETKLPKYFWADAINTACHVLNKVLIRPILKKTPYEIYNGRKPNISYFRVF 108

Query: 181 GSTCYILNT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
           G  C++LN  K+   KFD+K+ +A FLGYST+SKA+R+YN  +  VEES+
Sbjct: 109 GCKCFVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESV 158


>KYP33754.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1011

 Score =  290 bits (741), Expect(2) = e-107
 Identities = 159/274 (58%), Positives = 195/274 (71%), Gaps = 14/274 (5%)
 Frame = +3

Query: 324  SIHITFHE-ELQYENLEIVD-LTHQFENLNI-------PNDSEKDTTNNNQAETQPIP-- 470
            SIH+ F E  L     +I+D +   FE+ +I         D EK+ +   + +T   P  
Sbjct: 400  SIHVVFDETNLVCPRRDIIDEIVESFEDTHINEQTHKDDKDKEKEDSTIQEGQTNINPQR 459

Query: 471  --RLIKDHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQE 641
              R+ ++HP E IIG+    V TR+S K+  N M+FVS IE K I EAL D++WI AMQE
Sbjct: 460  EWRISRNHPLENIIGDITKGVITRNSLKEACNNMSFVSEIEVKNIDEALNDEHWINAMQE 519

Query: 642  ELNQFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFD 821
            ELNQF +N VWDLV +P +  IIGTKW+FRNKL+E G VIRNKARLVA+GYNQ+EGID++
Sbjct: 520  ELNQFERNQVWDLVNRPTNHPIIGTKWIFRNKLDEHGLVIRNKARLVAKGYNQEEGIDYE 579

Query: 822  ETYAPVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDY 1001
            ETYAPVARLEAIRMLLA A+  + KLYQMDVKSAFLNG IQEEVYV QPPGFE  E  ++
Sbjct: 580  ETYAPVARLEAIRMLLAYASIMDFKLYQMDVKSAFLNGFIQEEVYVEQPPGFENSEFPNH 639

Query: 1002 VYKLKKALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            V+KLKKALYGLKQAPR WYERL  +L +  F+ G
Sbjct: 640  VFKLKKALYGLKQAPRAWYERLSKFLLEKEFTRG 673



 Score =  128 bits (321), Expect(2) = e-107
 Identities = 57/110 (51%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
           L+E+ARTM+ +   PK FWAEAVNTACY +NR  +   LKKTPYE+ + +KP + + H F
Sbjct: 292 LEELARTMLNDSKLPKYFWAEAVNTACYTMNRALIRPILKKTPYELFNGRKPNISHLHIF 351

Query: 181 GSTCYILNT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
           G  C++LN  KD+  KFD+KS +  FLGYS +SK+FR+YN  +  +EES+
Sbjct: 352 GCKCFVLNNGKDNLGKFDAKSDEGIFLGYSLNSKSFRIYNKRTMTIEESI 401


>KYP64004.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1021

 Score =  288 bits (736), Expect(2) = e-106
 Identities = 157/274 (57%), Positives = 194/274 (70%), Gaps = 14/274 (5%)
 Frame = +3

Query: 324  SIHITFHE-ELQYENLEIVD-LTHQFENLNIPNDSEKDTTNNNQAET-----------QP 464
            SIH+ F E  L     +I+D +   FE+ +I   + KD  +  + ++           Q 
Sbjct: 410  SIHVVFDETNLVCPRRDIIDEIVESFEDTHINEQTHKDDKDKEKEDSTIQEGQTNINSQR 469

Query: 465  IPRLIKDHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQE 641
              R+ ++HP E IIG+    V TR+S K+  N M+FVS IE K I EAL D++WI AMQE
Sbjct: 470  EWRISRNHPLENIIGDITKGVITRNSLKEACNNMSFVSEIEVKNIDEALNDEHWINAMQE 529

Query: 642  ELNQFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFD 821
            ELNQF +N VWDLV +P +  IIGTKW+FRNKL+E G VIRNKARLVA+GYNQ+EGID++
Sbjct: 530  ELNQFERNQVWDLVNRPTNHPIIGTKWIFRNKLDEHGLVIRNKARLVAKGYNQEEGIDYE 589

Query: 822  ETYAPVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDY 1001
            ETYAPVARLEAIRMLLA A+  + KLYQMDVKSAFLNG IQEEVYV QPPGFE  E  ++
Sbjct: 590  ETYAPVARLEAIRMLLAYASIMDFKLYQMDVKSAFLNGFIQEEVYVEQPPGFENSEFPNH 649

Query: 1002 VYKLKKALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            V+KLKKALYGLKQAPR WYERL  +L +  F+ G
Sbjct: 650  VFKLKKALYGLKQAPRAWYERLSKFLLEKEFTRG 683



 Score =  128 bits (321), Expect(2) = e-106
 Identities = 57/110 (51%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
           L+E+ARTM+ +   PK FWAEAVNTACY +NR  +   LKKTPYE+ + +KP + + H F
Sbjct: 302 LEELARTMLNDSKLPKYFWAEAVNTACYTMNRALIRPILKKTPYELFNGRKPNISHLHIF 361

Query: 181 GSTCYILNT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
           G  C++LN  KD+  KFD+KS +  FLGYS +SK+FR+YN  +  +EES+
Sbjct: 362 GCKCFVLNNGKDNLGKFDAKSDEGIFLGYSLNSKSFRIYNKRTMTIEESI 411


>KYP53827.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 676

 Score =  285 bits (729), Expect(2) = e-105
 Identities = 149/263 (56%), Positives = 198/263 (75%), Gaps = 11/263 (4%)
 Frame = +3

Query: 324  SIHITFHEELQYEN--LEIVDLTHQFENL---NIPNDSEKDTTNNNQAE--TQPIPRLIK 482
            S+H+ F E  + E   +EI  LT   +     N PN+  K++ ++ +    ++ +P+  K
Sbjct: 413  SVHVVFDESNKQETRKIEIEYLTELLDQPLLENEPNEEPKESQSHEKVRETSEQLPKEWK 472

Query: 483  ---DHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQEELN 650
               D   + IIGN    V TRS+ K++ N MAFVS +EPK I EALKD++W++AMQEELN
Sbjct: 473  TSRDLSMDNIIGNIGKGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAMQEELN 532

Query: 651  QFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETY 830
            QF +N+VWDLVP P+D  IIGTKWVFRNKL+E+G ++RNKARLVA+GYNQ+EGID+DET+
Sbjct: 533  QFERNEVWDLVPLPKDYPIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGIDYDETF 592

Query: 831  APVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYK 1010
            APVAR+EAIR+LLA ++ KN KLYQM+VKSAFLNG+IQEEVY+ Q PGF   +  ++VYK
Sbjct: 593  APVARIEAIRLLLAYSSIKNFKLYQMNVKSAFLNGLIQEEVYMEQLPGFVDFKNPNHVYK 652

Query: 1011 LKKALYGLKQAPRNWYERLKTYL 1079
            LK+ALYGLKQAPR+WY+RL  +L
Sbjct: 653  LKRALYGLKQAPRSWYDRLSKFL 675



 Score =  128 bits (321), Expect(2) = e-105
 Identities = 59/110 (53%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
           L+E+ARTM+ E   PK FWA+A+NT C+VLN+V +   LKKTPY+I + +KP + YF  F
Sbjct: 305 LEELARTMLNEIKLPKYFWADAINTTCHVLNKVLIRPILKKTPYKIYNGRKPNISYFRVF 364

Query: 181 GSTCYILNT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
           G  CY+LN  K+   KFD+K+ +A FLGYST+SKA+R+YN  +  VEES+
Sbjct: 365 GCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESV 414


>KYP66812.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 900

 Score =  283 bits (725), Expect(2) = e-105
 Identities = 153/274 (55%), Positives = 193/274 (70%), Gaps = 14/274 (5%)
 Frame = +3

Query: 324  SIHITFHE-ELQYENLEIVD-LTHQFENLNIPNDSEKDTTNNNQAET-----------QP 464
            S+H+ F E  L     ++ D +   FE+ ++   + KD  +  + ++           + 
Sbjct: 289  SVHVVFDETNLVCPRRDVFDEIVESFEDTHLNEQTHKDDKDKEKEDSTIQEGQTNINSER 348

Query: 465  IPRLIKDHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQE 641
              R+ ++HP E IIG+    V TR+S K+  N M+FVS IE K I EAL D++WI AMQE
Sbjct: 349  EWRISRNHPLENIIGDITKGVITRNSLKEACNNMSFVSEIEVKNIDEALNDEHWINAMQE 408

Query: 642  ELNQFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFD 821
            ELNQF +N VWDLV +P +  IIGTKW+FRNKL+E G VIRNKARLVA+GYNQ+EGID++
Sbjct: 409  ELNQFERNQVWDLVNRPTNHPIIGTKWIFRNKLDEHGLVIRNKARLVAKGYNQEEGIDYE 468

Query: 822  ETYAPVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDY 1001
            ETYAPVARLEAIRMLLA A+  + KLYQMDVKSAFLNG IQEEVYV QPPGFE  E  ++
Sbjct: 469  ETYAPVARLEAIRMLLAYASIMDFKLYQMDVKSAFLNGFIQEEVYVEQPPGFENSEFPNH 528

Query: 1002 VYKLKKALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            V+KLKKALYGLKQAPR WYERL  +L +  F+ G
Sbjct: 529  VFKLKKALYGLKQAPRAWYERLSKFLLEKEFTRG 562



 Score =  127 bits (320), Expect(2) = e-105
 Identities = 57/110 (51%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
           L+E+ARTM+ +   PK FWAEAVNTACY +NR  +   LKKTPYE+ + +KP + + H F
Sbjct: 181 LEELARTMLNDSKLPKYFWAEAVNTACYTMNRALIRPILKKTPYELFNGRKPNISHLHIF 240

Query: 181 GSTCYILNT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
           G  C++LN  KD+  KFD+KS +  FLGYS +SK+FR+YN  +  +EES+
Sbjct: 241 GCKCFVLNNGKDNLGKFDAKSDEGIFLGYSLNSKSFRIYNKRTMTIEESV 290


>AAO73529.1 gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  286 bits (732), Expect(2) = e-101
 Identities = 145/254 (57%), Positives = 179/254 (70%), Gaps = 1/254 (0%)
 Frame = +3

Query: 345  EELQYENLEIVDLTHQFENLNIPNDSEKDTTNNNQAETQPIPRLIKDHPQELIIGNPNDK 524
            E+++     + D     EN    +DS  D  N NQ + +P  R+ K HP+ELIIG+PN  
Sbjct: 989  EDVRTSGDNVADTAKSAENAE-NSDSATDEPNINQPDKRPSIRIQKMHPKELIIGDPNRG 1047

Query: 525  VKTRS-SFKDVANMAFVSIIEPKKISEALKDDYWIIAMQEELNQFTKNDVWDLVPKPQDK 701
            V TRS   + V+N  FVS IEPK + EAL D++WI AMQEEL QF +N+VW+LVP+P+  
Sbjct: 1048 VTTRSREIEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGT 1107

Query: 702  TIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETYAPVARLEAIRMLLAIAA 881
             +IGTKW+F+NK NE G + RNKARLVAQGY Q EG+DFDET+APVARLE+IR+LL +A 
Sbjct: 1108 NVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVAC 1167

Query: 882  HKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYKLKKALYGLKQAPRNWYE 1061
                KLYQMDVKSAFLNG + EE YV QP GF  P   D+VY+LKKALYGLKQAPR WYE
Sbjct: 1168 ILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYE 1227

Query: 1062 RLKTYLFDNGFSIG 1103
            RL  +L   G+  G
Sbjct: 1228 RLTEFLTQQGYRKG 1241



 Score =  114 bits (284), Expect(2) = e-101
 Identities = 56/109 (51%), Positives = 71/109 (65%)
 Frame = +1

Query: 1    LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
            LQE AR M+     P   WAEA+NTACY+ NRVT+      T YEI   +KP V +FH F
Sbjct: 864  LQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFHIF 923

Query: 181  GSTCYILNTKDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
            GS CYIL  ++ R K D KS    FLGYST+S+A+RV+N+ +R V ES+
Sbjct: 924  GSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESI 972


>KYP70668.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 548

 Score =  286 bits (731), Expect(2) = e-101
 Identities = 153/271 (56%), Positives = 195/271 (71%), Gaps = 11/271 (4%)
 Frame = +3

Query: 324  SIHITFHEELQYEN--LEIVDLTHQFENLNI---PNDSEKDTTNNNQAE--TQPIPRLIK 482
            S+H+ F E  + E    EI DLT   +   +   PN+  K++ +N   E  ++ +P+  K
Sbjct: 102  SVHVVFGETNKQETKQTEIEDLTDLLDQPLLETEPNEKPKESESNETTEDTSEQLPKESK 161

Query: 483  ---DHPQELIIGNPNDKVKTRSSFKDVAN-MAFVSIIEPKKISEALKDDYWIIAMQEELN 650
               D   E IIGN      TR   K++ N MAFVS +EPK I EALKD++W++ MQEELN
Sbjct: 162  TSRDLSMENIIGNIGKGGSTRRVIKNICNTMAFVSQVEPKTIDEALKDEHWLMDMQEELN 221

Query: 651  QFTKNDVWDLVPKPQDKTIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETY 830
            QF +N+VWDLVP P D  IIGTKWVFRNK +E+  +IRNKARLVA+GYNQ+EGID+DET+
Sbjct: 222  QFERNEVWDLVPLPNDYPIIGTKWVFRNKFDESRIIIRNKARLVAKGYNQEEGIDYDETF 281

Query: 831  APVARLEAIRMLLAIAAHKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYK 1010
            APVAR+EAIR+LLA ++  N KLYQMDVKSAFLNG+IQEEVYV QPPGF   +  ++VYK
Sbjct: 282  APVARIEAIRLLLAYSSIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKYPNHVYK 341

Query: 1011 LKKALYGLKQAPRNWYERLKTYLFDNGFSIG 1103
            LKKALYGLKQAPR+WY+RL  +L +N +  G
Sbjct: 342  LKKALYGLKQAPRSWYDRLNKFLIENDYVRG 372



 Score =  114 bits (285), Expect(2) = e-101
 Identities = 53/103 (51%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
 Frame = +1

Query: 22  MMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTFGSTCYIL 201
           M+ E   PK FWA+A+NTAC+VLN+V +   LKKTPYEI + +KP + YF  FG  C++L
Sbjct: 1   MLNETKLPKYFWADAINTACHVLNKVLIRPILKKTPYEIYNGRKPNISYFRVFGCKCFML 60

Query: 202 NT-KDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
           N  K+   KFD+K  +  FLGYST+SKA+R+YN  +  V+ES+
Sbjct: 61  NNGKEQIGKFDAKDDEEIFLGYSTNSKAYRIYNKRTLIVKESV 103


>AAO73523.1 gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  286 bits (731), Expect(2) = e-101
 Identities = 145/254 (57%), Positives = 180/254 (70%), Gaps = 1/254 (0%)
 Frame = +3

Query: 345  EELQYENLEIVDLTHQFENLNIPNDSEKDTTNNNQAETQPIPRLIKDHPQELIIGNPNDK 524
            E+++     + D     EN    +DS  D +N NQ + +   R+ K HP+ELIIG+PN  
Sbjct: 988  EDVRTSGDNVADAAKSGENAE-NSDSATDESNINQPDKRSSTRIQKMHPKELIIGDPNRG 1046

Query: 525  VKTRS-SFKDVANMAFVSIIEPKKISEALKDDYWIIAMQEELNQFTKNDVWDLVPKPQDK 701
            V TRS   + V+N  FVS IEPK + EAL D++WI AMQEEL QF +N+VW+LVP+P+  
Sbjct: 1047 VTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGT 1106

Query: 702  TIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETYAPVARLEAIRMLLAIAA 881
             +IGTKW+F+NK NE G + RNKARLVAQGY Q EG+DFDET+APVARLE+IR+LL +A 
Sbjct: 1107 NVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVAC 1166

Query: 882  HKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYKLKKALYGLKQAPRNWYE 1061
                KLYQMDVKSAFLNG + EEVYV QP GF  P   D+VY+LKKALYGLKQAPR WYE
Sbjct: 1167 ILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYE 1226

Query: 1062 RLKTYLFDNGFSIG 1103
            RL  +L   G+  G
Sbjct: 1227 RLTEFLTQQGYRKG 1240



 Score =  114 bits (284), Expect(2) = e-101
 Identities = 56/109 (51%), Positives = 71/109 (65%)
 Frame = +1

Query: 1    LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
            LQE AR M+     P   WAEA+NTACY+ NRVT+      T YEI   +KP V +FH F
Sbjct: 863  LQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFHIF 922

Query: 181  GSTCYILNTKDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
            GS CYIL  ++ R K D KS    FLGYST+S+A+RV+N+ +R V ES+
Sbjct: 923  GSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESI 971


>AAO73521.1 gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  286 bits (731), Expect(2) = e-101
 Identities = 145/254 (57%), Positives = 180/254 (70%), Gaps = 1/254 (0%)
 Frame = +3

Query: 345  EELQYENLEIVDLTHQFENLNIPNDSEKDTTNNNQAETQPIPRLIKDHPQELIIGNPNDK 524
            E+++     + D     EN    +DS  D +N NQ + +   R+ K HP+ELIIG+PN  
Sbjct: 986  EDVRTSGDNVADAAKSGENAE-NSDSATDESNINQPDKRSSTRIQKMHPKELIIGDPNRG 1044

Query: 525  VKTRS-SFKDVANMAFVSIIEPKKISEALKDDYWIIAMQEELNQFTKNDVWDLVPKPQDK 701
            V TRS   + V+N  FVS IEPK + EAL D++WI AMQEEL QF +N+VW+LVP+P+  
Sbjct: 1045 VTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGT 1104

Query: 702  TIIGTKWVFRNKLNEAGEVIRNKARLVAQGYNQQEGIDFDETYAPVARLEAIRMLLAIAA 881
             +IGTKW+F+NK NE G + RNKARLVAQGY Q EG+DFDET+APVARLE+IR+LL +A 
Sbjct: 1105 NVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVAC 1164

Query: 882  HKNIKLYQMDVKSAFLNGIIQEEVYVAQPPGFEIPEKGDYVYKLKKALYGLKQAPRNWYE 1061
                KLYQMDVKSAFLNG + EEVYV QP GF  P   D+VY+LKKALYGLKQAPR WYE
Sbjct: 1165 ILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYE 1224

Query: 1062 RLKTYLFDNGFSIG 1103
            RL  +L   G+  G
Sbjct: 1225 RLTEFLTQQGYRKG 1238



 Score =  114 bits (284), Expect(2) = e-101
 Identities = 56/109 (51%), Positives = 71/109 (65%)
 Frame = +1

Query: 1    LQEMARTMMLEHNTPKTFWAEAVNTACYVLNRVTVHSHLKKTPYEIIHSKKPRVDYFHTF 180
            LQE AR M+     P   WAEA+NTACY+ NRVT+      T YEI   +KP V +FH F
Sbjct: 861  LQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFHIF 920

Query: 181  GSTCYILNTKDDRDKFDSKSHKAFFLGYSTSSKAFRVYNTISRKVEESL 327
            GS CYIL  ++ R K D KS    FLGYST+S+A+RV+N+ +R V ES+
Sbjct: 921  GSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESI 969