BLASTX nr result

ID: Alisma22_contig00019960 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00019960
         (327 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

JAT62217.1 F-box protein At5g03970 [Anthurium amnicola]                55   1e-06
XP_019251279.1 PREDICTED: F-box protein At3g26010-like [Nicotian...    53   7e-06

>JAT62217.1 F-box protein At5g03970 [Anthurium amnicola]
          Length = 372

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
 Frame = -1

Query: 327 ILASSGGILLCSGVDIHKPNTGRHDYYVVNPLTKEYRALPDSSVDRSHPVIGFVCREVVP 148
           ILASSGG+LLCS           H Y+V  PLT+ +R LP          +GF+ RE  P
Sbjct: 103 ILASSGGLLLCSKKS--------HSYFVCEPLTRRWRGLPPPPDRPPSLEVGFLHREDPP 154

Query: 147 ----SAAEAYDYIYEVVKISHDGGPVFCIKTYSSRSRQW 43
               SA+      Y VV++ +       ++TYSS + +W
Sbjct: 155 LRPRSASSPPIRSYRVVRLFYHSPTAMAVETYSSETGEW 193


>XP_019251279.1 PREDICTED: F-box protein At3g26010-like [Nicotiana attenuata]
          Length = 436

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 28/102 (27%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
 Frame = -1

Query: 321 ASSGGILLCSGVDIHKPNTGRHDYYVVNPLTKEYRALPDSSVDRSH--PVIGFVCREVVP 148
           AS G ++LCS ++ +  ++   +YY+ N +T+++ ALP +   R H    +GF+   + P
Sbjct: 128 ASCGDLILCSVMNNYMKSSSTMNYYICNIVTRQWIALPPAPSGRGHFGENVGFL---IEP 184

Query: 147 SAAEAYDYIYEVVKISHDGGPVFCIKTYSSRSRQWSEVSIQS 22
           ++ + + Y+Y V++    G   F I+ +SS   +W+++ + S
Sbjct: 185 NSKDNHQYMYLVLRFIPCGYSEFLIEKFSSEQGKWTKLVVTS 226


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