BLASTX nr result
ID: Alisma22_contig00019817
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00019817
(256 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OAO89438.1 hypothetical protein AXX17_ATUG00590 [Arabidopsis tha... 99 1e-23
XP_013601107.1 PREDICTED: uncharacterized protein LOC106308493 [... 99 1e-23
OAP01825.1 hypothetical protein AXX17_AT3G36900 [Arabidopsis tha... 98 3e-23
BAA22288.1 polyprotein [Oryza australiensis] 99 2e-22
AAV85747.1 Integrase core domain, putative [Oryza sativa Japonic... 99 3e-22
AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-clas... 98 6e-22
AAP44605.1 putative polyprotein [Oryza sativa Japonica Group] 97 9e-22
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass... 97 9e-22
ADB85430.1 putative retrotransposon protein [Phyllostachys edulis] 97 1e-21
ABG22008.1 retrotransposon protein, putative, Ty1-copia subclass... 97 1e-21
AAR06328.1 putative polyprotein [Oryza sativa Japonica Group] 97 1e-21
ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass... 97 1e-21
AAC26250.1 contains similarity to reverse transcriptase (Pfam: r... 97 2e-21
ABA97342.2 retrotransposon protein, putative, Ty1-copia subclass... 97 2e-21
AAK52163.1 putative polyprotein [Oryza sativa Japonica Group] 96 3e-21
ABF97078.1 retrotransposon protein, putative, Ty1-copia subclass... 96 3e-21
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 95 6e-21
AAX96622.1 retrotransposon protein, putative, Ty1-copia sub-clas... 93 7e-21
AAP03364.1 putative polyprotein [Oryza sativa Japonica Group] 94 1e-20
ABF96491.1 retrotransposon protein, putative, Ty1-copia subclass... 94 1e-20
>OAO89438.1 hypothetical protein AXX17_ATUG00590 [Arabidopsis thaliana]
Length = 234
Score = 98.6 bits (244), Expect = 1e-23
Identities = 48/70 (68%), Positives = 56/70 (80%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LP+SHG+ +SK QCP++ DER MS+IPYAS IGSIMY MLCTRPDV+ ALSMTS+YQS
Sbjct: 9 LPISHGITLSKTQCPSTHDERERMSRIPYASAIGSIMYAMLCTRPDVACALSMTSRYQSD 68
Query: 76 LGECH*TVIK 47
GE H T K
Sbjct: 69 PGESHWTADK 78
>XP_013601107.1 PREDICTED: uncharacterized protein LOC106308493 [Brassica oleracea
var. oleracea]
Length = 239
Score = 98.6 bits (244), Expect = 1e-23
Identities = 48/78 (61%), Positives = 58/78 (74%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ +SK+QCP++ DER MSKIPYAS+IGSIMY M+CTR DV+Y L MTS+YQS
Sbjct: 87 LPMSHGITLSKIQCPSTQDERERMSKIPYASSIGSIMYAMICTRQDVAYVLRMTSRYQSD 146
Query: 76 LGECH*TVIKKHPKVFEN 23
E H T +K K N
Sbjct: 147 PCESHWTTVKNILKHLRN 164
>OAP01825.1 hypothetical protein AXX17_AT3G36900 [Arabidopsis thaliana]
Length = 245
Score = 97.8 bits (242), Expect = 3e-23
Identities = 48/68 (70%), Positives = 55/68 (80%)
Frame = -1
Query: 250 MSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSYLG 71
MSHG+ +SK QCP++ DER MSKIPYAS IGSIMY MLCTRPDV+ ALSMTS+YQS G
Sbjct: 1 MSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLCTRPDVACALSMTSRYQSDPG 60
Query: 70 ECH*TVIK 47
E H V+K
Sbjct: 61 ERHWIVVK 68
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 99.4 bits (246), Expect = 2e-22
Identities = 48/70 (68%), Positives = 54/70 (77%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ +SK QCP + DER M +PYAS IGSIMY MLCTRPDVSYALS TS+YQS
Sbjct: 1066 LPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYALSATSRYQSD 1125
Query: 76 LGECH*TVIK 47
GE H T +K
Sbjct: 1126 PGEGHWTAVK 1135
>AAV85747.1 Integrase core domain, putative [Oryza sativa Japonica Group]
AAX92956.1 retrotransposon protein, putative, Ty1-copia
sub-class [Oryza sativa Japonica Group] ABA92827.2
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1184
Score = 98.6 bits (244), Expect = 3e-22
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ + K QCP + DER MS IPYAS IGSIMY MLCTRPDVSYALS TS+YQS
Sbjct: 937 LPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSD 996
Query: 76 LGECH*TVIK 47
GE H +K
Sbjct: 997 PGESHWIAVK 1006
>AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] ABA93176.1 retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 938
Score = 97.8 bits (242), Expect = 6e-22
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ + K QCP + +ER MS IPYAS IGSIMY MLCTRPDVSYALS TSQYQS
Sbjct: 785 LPMSHGINLGKNQCPQTTNERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSQYQSD 844
Query: 76 LGECH*TVIK 47
GE H +K
Sbjct: 845 PGESHWIALK 854
>AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 97.4 bits (241), Expect = 9e-22
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ + K QCP + DER MS IPYAS IGSIMY MLCTR DVSYALS TS+YQS
Sbjct: 928 LPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRYQSD 987
Query: 76 LGECH*TVIK 47
LGE H +K
Sbjct: 988 LGESHWIAVK 997
>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 97.4 bits (241), Expect = 9e-22
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ + K QCP + DER MS IPYAS IGSIMY MLCTR DVSYALS TS+YQS
Sbjct: 1015 LPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRYQSD 1074
Query: 76 LGECH*TVIK 47
LGE H +K
Sbjct: 1075 LGESHWIAVK 1084
>ADB85430.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 97.1 bits (240), Expect = 1e-21
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPM+HG+ +SK QCP + DER MS IPYAS IGSIMY M+CTRPDVSYALS+TS+YQ+
Sbjct: 646 LPMAHGINLSKNQCPTTTDERDKMSDIPYASAIGSIMYAMICTRPDVSYALSVTSRYQAD 705
Query: 76 LGECH*TVIK 47
E H T +K
Sbjct: 706 PSEGHWTAVK 715
>ABG22008.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 97.1 bits (240), Expect = 1e-21
Identities = 47/70 (67%), Positives = 52/70 (74%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LP+SHG+ + K QCP + DER MS IPYAS IGSIMY MLCTRPDV YALS TSQYQS
Sbjct: 690 LPLSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVPYALSATSQYQSD 749
Query: 76 LGECH*TVIK 47
GE H +K
Sbjct: 750 PGESHWIAVK 759
>AAR06328.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1063
Score = 97.1 bits (240), Expect = 1e-21
Identities = 50/79 (63%), Positives = 58/79 (73%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ + K QCP + DER MS IPYAS IGSIMY MLCTRPDVSYALS TS+YQS
Sbjct: 986 LPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSD 1045
Query: 76 LGECH*TVIKKHPKVFEND 20
GE K++P+V E +
Sbjct: 1046 PGESL-DSCKEYPEVLEKN 1063
>ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 97.1 bits (240), Expect = 1e-21
Identities = 50/79 (63%), Positives = 58/79 (73%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ + K QCP + DER MS IPYAS IGSIMY MLCTRPDVSYALS TS+YQS
Sbjct: 996 LPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSD 1055
Query: 76 LGECH*TVIKKHPKVFEND 20
GE K++P+V E +
Sbjct: 1056 PGESL-DSCKEYPEVLEKN 1073
>AAC26250.1 contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] CAB80804.1 putative
retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 96.7 bits (239), Expect = 2e-21
Identities = 47/70 (67%), Positives = 56/70 (80%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
+PMSHG+ +SK QCP++ DER MSKIPYAS IGSIMY ML TRPDV+ ALSMTS+YQS
Sbjct: 713 IPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALSMTSRYQSD 772
Query: 76 LGECH*TVIK 47
GE H V++
Sbjct: 773 PGESHWIVVR 782
>ABA97342.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 96.7 bits (239), Expect = 2e-21
Identities = 47/70 (67%), Positives = 52/70 (74%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ + K QCP + DER MS IPYAS IGSIMY MLCT PDVSYALS TS+YQS
Sbjct: 800 LPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTHPDVSYALSATSRYQSD 859
Query: 76 LGECH*TVIK 47
GE H +K
Sbjct: 860 PGESHWIAVK 869
>AAK52163.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 637
Score = 95.9 bits (237), Expect = 3e-21
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 3/73 (4%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ + K QCP + DER MS IPYAS IGSI+Y MLCTRPDVSYALS TS+YQ Y
Sbjct: 431 LPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIVYGMLCTRPDVSYALSATSRYQGY 490
Query: 76 L---GECH*TVIK 47
+ GE H V+K
Sbjct: 491 VPSPGESHWIVVK 503
>ABF97078.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 649
Score = 95.9 bits (237), Expect = 3e-21
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 3/73 (4%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ + K QCP + DER MS IPYAS IGSI+Y MLCTRPDVSYALS TS+YQ Y
Sbjct: 443 LPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIVYGMLCTRPDVSYALSATSRYQGY 502
Query: 76 L---GECH*TVIK 47
+ GE H V+K
Sbjct: 503 VPSPGESHWIVVK 515
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 95.1 bits (235), Expect = 6e-21
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ SK Q P++ DER M+ IPYAS IGSIMY M+CTR DVSYALS+TS+YQ+
Sbjct: 1062 LPMSHGISPSKSQRPSTTDERDRMNGIPYASAIGSIMYAMICTRQDVSYALSVTSRYQAD 1121
Query: 76 LGECH*TVIK 47
GECH T +K
Sbjct: 1122 PGECHWTAVK 1131
>AAX96622.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] ABA92972.1 retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 305
Score = 92.8 bits (229), Expect = 7e-21
Identities = 46/70 (65%), Positives = 51/70 (72%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSH + + K QC + DER MS IPYAS IGSIMY MLCTRPDVSYALS TS+YQS
Sbjct: 49 LPMSHDINLGKNQCSQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSD 108
Query: 76 LGECH*TVIK 47
GE H +K
Sbjct: 109 PGETHWIAVK 118
>AAP03364.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 657
Score = 94.4 bits (233), Expect = 1e-20
Identities = 46/70 (65%), Positives = 51/70 (72%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ + K QCP + DER MS IPYAS IG IMY MLCTRPDVSYALS TS+YQ
Sbjct: 430 LPMSHGINLGKNQCPQATDERNKMSVIPYASAIGCIMYAMLCTRPDVSYALSATSRYQLD 489
Query: 76 LGECH*TVIK 47
GE H +K
Sbjct: 490 PGESHWIAVK 499
>ABF96491.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 767
Score = 94.4 bits (233), Expect = 1e-20
Identities = 46/70 (65%), Positives = 51/70 (72%)
Frame = -1
Query: 256 LPMSHGVMISKVQCPNSCDERTCMSKIPYASTIGSIMYVMLCTRPDVSYALSMTSQYQSY 77
LPMSHG+ + K QCP + DER MS IPYAS IG IMY MLCTRPDVSYALS TS+YQ
Sbjct: 540 LPMSHGINLGKNQCPQATDERNKMSVIPYASAIGCIMYAMLCTRPDVSYALSATSRYQLD 599
Query: 76 LGECH*TVIK 47
GE H +K
Sbjct: 600 PGESHWIAVK 609