BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00018557
         (923 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EPS70546.1 hypothetical protein M569_04214, partial [Genlisea au...   234   8e-73
XP_010275998.1 PREDICTED: polyadenylation and cleavage factor ho...   246   1e-70
XP_010931817.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a...   244   5e-70
OAY74981.1 Polyadenylation and cleavage factor [Ananas comosus]       241   1e-69
JAT62598.1 Pre-mRNA cleavage complex 2 protein Pcf11 [Anthurium ...   243   1e-69
XP_020103161.1 polyadenylation and cleavage factor homolog 4-lik...   241   5e-69
OMO76739.1 hypothetical protein CCACVL1_15454 [Corchorus capsula...   238   4e-68
EOY28631.1 PCF11P-similar protein 4, putative isoform 2 [Theobro...   234   8e-68
KNA19276.1 hypothetical protein SOVF_062990 [Spinacia oleracea]       236   1e-67
KJB67157.1 hypothetical protein B456_010G178200 [Gossypium raimo...   235   1e-67
XP_007026008.2 PREDICTED: polyadenylation and cleavage factor ho...   236   2e-67
XP_012450329.1 PREDICTED: polyadenylation and cleavage factor ho...   235   7e-67
XP_016683609.1 PREDICTED: polyadenylation and cleavage factor ho...   235   7e-67
XP_012450328.1 PREDICTED: polyadenylation and cleavage factor ho...   235   7e-67
XP_008784554.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a...   235   7e-67
XP_016683608.1 PREDICTED: polyadenylation and cleavage factor ho...   235   8e-67
KJB67158.1 hypothetical protein B456_010G178200 [Gossypium raimo...   235   8e-67
XP_011459964.1 PREDICTED: polyadenylation and cleavage factor ho...   234   8e-67
XP_017645983.1 PREDICTED: polyadenylation and cleavage factor ho...   234   9e-67
XP_016753658.1 PREDICTED: polyadenylation and cleavage factor ho...   234   9e-67

>EPS70546.1 hypothetical protein M569_04214, partial [Genlisea aurea]
          Length = 261

 Score =  234 bits (596), Expect = 8e-73
 Identities = 126/224 (56%), Positives = 155/224 (69%), Gaps = 1/224 (0%)
 Frame = +2

Query: 254 SSVNGTRSTFGSFPDRQRRAATPLDAVPTRQSPP-ILDRFHLLLTERDEELRGVDGXXXX 430
           SSV  +R T    P      A   D V  +  PP ILDRF  ++ ER+EEL  +      
Sbjct: 27  SSVPLSRGTIYKSP------AIQSDGVGIKPIPPSILDRFRAMVKEREEELGVLRRGAPL 80

Query: 431 XXXXXXVVRMYEEVLSELTVNSKPIITELTIIAGEQRDHAEGIADAICSRIFEVSLEHKL 610
                 ++R+YE VLSELT+NSKPIIT+LTIIAGEQR+HAEGI D ICSRI EV  EHKL
Sbjct: 81  PLRIDEMLRLYEIVLSELTMNSKPIITDLTIIAGEQREHAEGIVDVICSRIIEVRAEHKL 140

Query: 611 PALYLLDSIVKNIGCKYVRYFAARLPEVFFEVYTQVTPSLYPAMHHLFRTWSNVFPPPIL 790
           PALYLLDSIVKNIG +Y+ YF+A LPEVF   Y+Q+ P+++PAM HLF TWS+VFP  +L
Sbjct: 141 PALYLLDSIVKNIGKEYITYFSAHLPEVFCAAYSQIHPNMHPAMRHLFGTWSSVFPLSVL 200

Query: 791 GKIEAQFEFTSGENKKFSGAHSRRETDSPSRPAHGIHVNPKYLE 922
            KIE Q +F+   N +FSG  S R ++SP +P HGIH+NPKYLE
Sbjct: 201 RKIEDQLQFSPSMNMQFSGLSSSRASESP-KPVHGIHINPKYLE 243


>XP_010275998.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Nelumbo nucifera]
          Length = 1071

 Score =  246 bits (627), Expect = 1e-70
 Identities = 135/243 (55%), Positives = 164/243 (67%), Gaps = 6/243 (2%)
 Frame = +2

Query: 212 MEEEGFFPIREKQPS----SVNGTRSTFGSFPDRQRRAATPLDAVPTRQSPPILDRFHLL 379
           MEEE F   RE   +    S  G+ ++ GS    +   A P D +  +  PPIL++F  L
Sbjct: 1   MEEERFVSARESPRNLGFLSERGSSTSGGSINSSK---AVPND-LAQKPPPPILEKFRAL 56

Query: 380 LTERDEELRGVDGXXXXXXXXXXVVRMYEEVLSELTVNSKPIITELTIIAGEQRDHAEGI 559
           L ER+EE+R  D           +VR+YE VLSELT NSKPIITELTIIAGEQR+H EGI
Sbjct: 57  LKEREEEMRVSDDDDVPPPSTEEIVRLYEVVLSELTFNSKPIITELTIIAGEQREHGEGI 116

Query: 560 ADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPEVFFEVYTQVTPSLYPA 739
           ADAIC+RI EV +E KLP+LYLLDSIVKNIG +Y RYFA+RLPEVF E Y QV P+LYPA
Sbjct: 117 ADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYARYFASRLPEVFCEAYRQVQPNLYPA 176

Query: 740 MHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRR--ETDSPSRPAHGIHVNPK 913
           M HLF TWS VFP  +L KIE + +F+   N++ +   + R  E   P RP+HGIHVNPK
Sbjct: 177 MRHLFGTWSTVFPTKVLRKIEVELQFSPASNQQSTSLTAPRSSEESPPPRPSHGIHVNPK 236

Query: 914 YLE 922
           YLE
Sbjct: 237 YLE 239


>XP_010931817.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
           homolog 4 [Elaeis guineensis]
          Length = 1070

 Score =  244 bits (623), Expect = 5e-70
 Identities = 138/239 (57%), Positives = 160/239 (66%), Gaps = 2/239 (0%)
 Frame = +2

Query: 212 MEEEGFFPIREKQPSSVNGTRSTFGSFPDRQRRAATPLDAVPTRQSPPILDRFHLLLTER 391
           ME+EG         SS    R   G  P R    A P    P R  P ILDRF  +L ER
Sbjct: 1   MEDEGL-------SSSRGNPRFPQGDRPPRPAPVAEP-QPPPGRSLPTILDRFRAMLRER 52

Query: 392 DEELRGVDGXXXXXXXXXX-VVRMYEEVLSELTVNSKPIITELTIIAGEQRDHAEGIADA 568
           DEELR   G           +VR+YEE+LSELT NSKPIITELTIIAG+    AEGIADA
Sbjct: 53  DEELREAIGEDPPPPPTAGEIVRLYEELLSELTFNSKPIITELTIIAGQHPQLAEGIADA 112

Query: 569 ICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPEVFFEVYTQVTPSLYPAMHH 748
           IC+R+ EV L+ KLP+LYLLDSIVKNIG +YVRYFAARLP+VF E Y QV PS YPAM H
Sbjct: 113 ICARVLEVPLDQKLPSLYLLDSIVKNIGREYVRYFAARLPKVFCEAYNQVHPSQYPAMRH 172

Query: 749 LFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETDSPS-RPAHGIHVNPKYLE 922
           LF TWS VFP  +L KIE + +F+  +N + SG  S R+++SPS RP+HGIHVNPKYLE
Sbjct: 173 LFGTWSQVFPLSVLRKIEDELQFSPSKNSQSSGITSMRQSESPSPRPSHGIHVNPKYLE 231


>OAY74981.1 Polyadenylation and cleavage factor [Ananas comosus]
          Length = 860

 Score =  241 bits (614), Expect = 1e-69
 Identities = 135/239 (56%), Positives = 162/239 (67%), Gaps = 2/239 (0%)
 Frame = +2

Query: 212 MEEEGFFPIREKQPSSVNGTRSTFGSFPDRQRRAATPLDAVPTRQSPPILDRFHLLLTER 391
           MEEE F   RE   +SV          P R   AA    A   R SPPIL+RF  ++ ER
Sbjct: 1   MEEERFPSSRENPRTSVAAAAFPQAERPPRAIAAA----AADARPSPPILERFRAMIRER 56

Query: 392 DEELRGV-DGXXXXXXXXXXVVRMYEEVLSELTVNSKPIITELTIIAGEQRDHAEGIADA 568
           +EE+  V DG          VVRMYEEVL+ELT NSKPIITELTIIAG+    A+GIA+A
Sbjct: 57  EEEMSEVLDGDPPPPPTAAEVVRMYEEVLAELTFNSKPIITELTIIAGQHIQFAQGIANA 116

Query: 569 ICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPEVFFEVYTQVTPSLYPAMHH 748
           IC+RI EV ++ KLP+LYLLDSIVKNIG  YVR+FA+RLP+VF E Y QV PSLY AM H
Sbjct: 117 ICARILEVPMDQKLPSLYLLDSIVKNIGQDYVRHFASRLPKVFCEAYNQVHPSLYSAMRH 176

Query: 749 LFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETDSPS-RPAHGIHVNPKYLE 922
           LF TWS VFP  +L KIE   +F+  EN++  G  + R+++SPS RP+HGIHVNPKYLE
Sbjct: 177 LFGTWSQVFPSSVLRKIEDALQFSPRENQRSLGIANLRQSESPSPRPSHGIHVNPKYLE 235


>JAT62598.1 Pre-mRNA cleavage complex 2 protein Pcf11 [Anthurium amnicola]
          Length = 1039

 Score =  243 bits (619), Expect = 1e-69
 Identities = 141/254 (55%), Positives = 163/254 (64%), Gaps = 17/254 (6%)
 Frame = +2

Query: 212 MEEEGFFPIREKQPSSVNGTRSTFGSFPDRQRRAA-TPL------------DAVPTRQSP 352
           MEEE +F  R+     V G     G  PDR  R    PL             A   R SP
Sbjct: 1   MEEERYFSTRD----GVGGNPRALGFHPDRPPRPTRAPLPPAAAAEQQPQQQAGQQRPSP 56

Query: 353 PILDRFHLLLTERDEELRGVDGXXXXXXXXXX---VVRMYEEVLSELTVNSKPIITELTI 523
           PIL+RF  LL ER+EE+R   G             +V  YEEVLSEL  NSKP+ITELT+
Sbjct: 57  PILERFRALLREREEEVRDATGAAEGGTPPPTTDEIVAFYEEVLSELIFNSKPVITELTM 116

Query: 524 IAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPEVFFE 703
           IAGE R++AEGIADAIC+RI EVS E KLP+LYLLDSIVKNIG +YVR+FAARLPEVF E
Sbjct: 117 IAGEHREYAEGIADAICARILEVSAEQKLPSLYLLDSIVKNIGREYVRFFAARLPEVFVE 176

Query: 704 VYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETDSPS- 880
            Y QV  SLYPAM HLF TWS VFP   L KIE + +F+S E++K SG    + ++S S 
Sbjct: 177 AYNQVPSSLYPAMRHLFGTWSQVFPSSTLQKIEDELQFSSPESQKQSGLAKVKHSESLSP 236

Query: 881 RPAHGIHVNPKYLE 922
            PAHGIHVNPKYLE
Sbjct: 237 HPAHGIHVNPKYLE 250


>XP_020103161.1 polyadenylation and cleavage factor homolog 4-like [Ananas comosus]
          Length = 999

 Score =  241 bits (614), Expect = 5e-69
 Identities = 135/239 (56%), Positives = 162/239 (67%), Gaps = 2/239 (0%)
 Frame = +2

Query: 212 MEEEGFFPIREKQPSSVNGTRSTFGSFPDRQRRAATPLDAVPTRQSPPILDRFHLLLTER 391
           MEEE F   RE   +SV          P R   AA    A   R SPPIL+RF  ++ ER
Sbjct: 1   MEEERFPSSRENPRTSVAAAAFPQAERPPRAIAAA----AADARPSPPILERFRAMIRER 56

Query: 392 DEELRGV-DGXXXXXXXXXXVVRMYEEVLSELTVNSKPIITELTIIAGEQRDHAEGIADA 568
           +EE+  V DG          VVRMYEEVL+ELT NSKPIITELTIIAG+    A+GIA+A
Sbjct: 57  EEEMSEVLDGDPPPPPTAAEVVRMYEEVLAELTFNSKPIITELTIIAGQHIQFAQGIANA 116

Query: 569 ICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPEVFFEVYTQVTPSLYPAMHH 748
           IC+RI EV ++ KLP+LYLLDSIVKNIG  YVR+FA+RLP+VF E Y QV PSLY AM H
Sbjct: 117 ICARILEVPMDQKLPSLYLLDSIVKNIGQDYVRHFASRLPKVFCEAYNQVHPSLYSAMRH 176

Query: 749 LFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETDSPS-RPAHGIHVNPKYLE 922
           LF TWS VFP  +L KIE   +F+  EN++  G  + R+++SPS RP+HGIHVNPKYLE
Sbjct: 177 LFGTWSQVFPSSVLRKIEDALQFSPRENQRSLGIANLRQSESPSPRPSHGIHVNPKYLE 235


>OMO76739.1 hypothetical protein CCACVL1_15454 [Corchorus capsularis]
          Length = 1003

 Score =  238 bits (608), Expect = 4e-68
 Identities = 121/199 (60%), Positives = 148/199 (74%), Gaps = 3/199 (1%)
 Frame = +2

Query: 332 VPTRQSPPILDRFHLLLTERDEELR---GVDGXXXXXXXXXXVVRMYEEVLSELTVNSKP 502
           +  +Q P IL+RF  LL +R++ELR   G D           +V++Y+ VLSELT NSKP
Sbjct: 5   IAQKQLPSILERFKALLKQREDELRVSGGDDDEVVPTLSSEDIVQLYDAVLSELTFNSKP 64

Query: 503 IITELTIIAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAAR 682
           IIT+LTIIAGEQR+H EGIAD IC+RI EV +E KLP+LYLLDSIVKNIG +YVR+F++R
Sbjct: 65  IITDLTIIAGEQREHGEGIADVICARIVEVPVEQKLPSLYLLDSIVKNIGREYVRHFSSR 124

Query: 683 LPEVFFEVYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRR 862
           LPEVF E Y QV P+LYPAM HLF TWS VFPP +L KIE Q +F+   N++ SG  S R
Sbjct: 125 LPEVFIEAYRQVNPNLYPAMRHLFGTWSAVFPPSVLRKIETQLQFSQSANQQSSGVTSLR 184

Query: 863 ETDSPSRPAHGIHVNPKYL 919
            ++SP RP HGIHVNPKYL
Sbjct: 185 SSESP-RPTHGIHVNPKYL 202


>EOY28631.1 PCF11P-similar protein 4, putative isoform 2 [Theobroma cacao]
          Length = 733

 Score =  234 bits (596), Expect = 8e-68
 Identities = 121/198 (61%), Positives = 147/198 (74%), Gaps = 5/198 (2%)
 Frame = +2

Query: 341 RQSPPILDRFHLLLTERDEELR---GVDGXXXXXXXXXX--VVRMYEEVLSELTVNSKPI 505
           +Q P I +RF  LL +R+++LR   G DG            +V++YE VLSELT NSKPI
Sbjct: 8   KQQPSISERFKALLKQREDDLRVSGGDDGDDEVAATPSRGEIVQLYEAVLSELTFNSKPI 67

Query: 506 ITELTIIAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARL 685
           IT+LTIIAGEQR+H EGIADAIC+RI EV +E KLP+LYLLDSIVKNIG +YVR+F++RL
Sbjct: 68  ITDLTIIAGEQREHGEGIADAICARILEVPVEQKLPSLYLLDSIVKNIGREYVRHFSSRL 127

Query: 686 PEVFFEVYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRE 865
           PEVF E Y QV P+LYPAM HLF TWS VFPP +L KIE Q +F+   N++  G  S R 
Sbjct: 128 PEVFCEAYRQVNPNLYPAMRHLFGTWSTVFPPSVLRKIEIQLQFSQSANQQSPGVTSLRS 187

Query: 866 TDSPSRPAHGIHVNPKYL 919
           ++SP RP HGIHVNPKYL
Sbjct: 188 SESP-RPTHGIHVNPKYL 204


>KNA19276.1 hypothetical protein SOVF_062990 [Spinacia oleracea]
          Length = 914

 Score =  236 bits (602), Expect = 1e-67
 Identities = 124/207 (59%), Positives = 148/207 (71%), Gaps = 6/207 (2%)
 Frame = +2

Query: 320 PLDAVPTRQSP-PILDRFHLLLTERDEELRGVDGXXXXXXXXXX-----VVRMYEEVLSE 481
           P D V     P PILDRF  LL ER+ E RG D                +VR Y++VLSE
Sbjct: 2   PSDTVMKPSVPSPILDRFRFLLKEREAEFRGSDDDEDDLVCIPPPSMEEIVRFYDDVLSE 61

Query: 482 LTVNSKPIITELTIIAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKY 661
           LT NSKPIIT+LTIIAGEQR+HAEGIADAIC+R+ EV ++ K+P+LYLLDSIVKNIG  Y
Sbjct: 62  LTFNSKPIITDLTIIAGEQREHAEGIADAICARVLEVPVDQKMPSLYLLDSIVKNIGRDY 121

Query: 662 VRYFAARLPEVFFEVYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKF 841
            R+FA+RLPEVF EVY QV P+LY +M HLFRTWS VFP P+LG IE + +F+   N+  
Sbjct: 122 ARHFASRLPEVFCEVYRQVPPNLYSSMRHLFRTWSTVFPSPVLGMIEDELQFSPRANQPS 181

Query: 842 SGAHSRRETDSPSRPAHGIHVNPKYLE 922
           S   S R ++SP RP+HGIHVNPKYLE
Sbjct: 182 SNLASMRASESP-RPSHGIHVNPKYLE 207


>KJB67157.1 hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 831

 Score =  235 bits (599), Expect = 1e-67
 Identities = 121/196 (61%), Positives = 147/196 (75%), Gaps = 3/196 (1%)
 Frame = +2

Query: 341 RQSPPILDRFHLLLTERDEELR---GVDGXXXXXXXXXXVVRMYEEVLSELTVNSKPIIT 511
           +Q P I +RF  LL +R++ELR   GV            +V++YE VLSELT NSKPIIT
Sbjct: 10  KQLPSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIIT 69

Query: 512 ELTIIAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPE 691
           +LTIIAGEQR+H EGIADAIC+RI EV +E KLP+LYLLDSIVKNIG +YVRYF++RLPE
Sbjct: 70  DLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPE 129

Query: 692 VFFEVYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETD 871
           VF E Y QV P+L+PAM HLF TWS VFPP +L KIE Q +F+   N++ SG  S + ++
Sbjct: 130 VFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSE 189

Query: 872 SPSRPAHGIHVNPKYL 919
           SP RP HGIHVNPKYL
Sbjct: 190 SP-RPTHGIHVNPKYL 204


>XP_007026008.2 PREDICTED: polyadenylation and cleavage factor homolog 4 [Theobroma
           cacao]
          Length = 1001

 Score =  236 bits (603), Expect = 2e-67
 Identities = 120/195 (61%), Positives = 146/195 (74%), Gaps = 2/195 (1%)
 Frame = +2

Query: 341 RQSPPILDRFHLLLTERDEELR--GVDGXXXXXXXXXXVVRMYEEVLSELTVNSKPIITE 514
           +Q P I +RF  LL +R+++LR  G D           +V++YE VLSELT NSKPIIT+
Sbjct: 8   KQQPSISERFKALLKQREDDLRVSGGDDEVAATPSRGEIVQLYEAVLSELTFNSKPIITD 67

Query: 515 LTIIAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPEV 694
           LTIIAGEQR+H EGIADAIC+RI EV +E KLP+LYLLDSIVKNIG +YVR+F++RLPEV
Sbjct: 68  LTIIAGEQREHGEGIADAICARILEVPVEQKLPSLYLLDSIVKNIGREYVRHFSSRLPEV 127

Query: 695 FFEVYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETDS 874
           F E Y QV P+LYPAM HLF TWS VFPP +L KIE Q +F+   N++  G  S R ++S
Sbjct: 128 FCEAYRQVNPNLYPAMRHLFGTWSTVFPPSVLRKIEIQLQFSQSANQQSPGVTSLRSSES 187

Query: 875 PSRPAHGIHVNPKYL 919
           P RP HGIHVNPKYL
Sbjct: 188 P-RPTHGIHVNPKYL 201


>XP_012450329.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Gossypium raimondii]
          Length = 1001

 Score =  235 bits (599), Expect = 7e-67
 Identities = 121/196 (61%), Positives = 147/196 (75%), Gaps = 3/196 (1%)
 Frame = +2

Query: 341 RQSPPILDRFHLLLTERDEELR---GVDGXXXXXXXXXXVVRMYEEVLSELTVNSKPIIT 511
           +Q P I +RF  LL +R++ELR   GV            +V++YE VLSELT NSKPIIT
Sbjct: 10  KQLPSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIIT 69

Query: 512 ELTIIAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPE 691
           +LTIIAGEQR+H EGIADAIC+RI EV +E KLP+LYLLDSIVKNIG +YVRYF++RLPE
Sbjct: 70  DLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPE 129

Query: 692 VFFEVYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETD 871
           VF E Y QV P+L+PAM HLF TWS VFPP +L KIE Q +F+   N++ SG  S + ++
Sbjct: 130 VFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSE 189

Query: 872 SPSRPAHGIHVNPKYL 919
           SP RP HGIHVNPKYL
Sbjct: 190 SP-RPTHGIHVNPKYL 204


>XP_016683609.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X2 [Gossypium hirsutum]
          Length = 1004

 Score =  235 bits (599), Expect = 7e-67
 Identities = 121/196 (61%), Positives = 147/196 (75%), Gaps = 3/196 (1%)
 Frame = +2

Query: 341 RQSPPILDRFHLLLTERDEELR---GVDGXXXXXXXXXXVVRMYEEVLSELTVNSKPIIT 511
           +Q P I +RF  LL +R++ELR   GV            +V++YE VLSELT NSKPIIT
Sbjct: 10  KQLPSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIIT 69

Query: 512 ELTIIAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPE 691
           +LTIIAGEQR+H EGIADAIC+RI EV +E KLP+LYLLDSIVKNIG +YVRYF++RLPE
Sbjct: 70  DLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPE 129

Query: 692 VFFEVYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETD 871
           VF E Y QV P+L+PAM HLF TWS VFPP +L KIE Q +F+   N++ SG  S + ++
Sbjct: 130 VFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLHKIEMQLQFSQTGNQQSSGVTSLQSSE 189

Query: 872 SPSRPAHGIHVNPKYL 919
           SP RP HGIHVNPKYL
Sbjct: 190 SP-RPTHGIHVNPKYL 204


>XP_012450328.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Gossypium raimondii] KJB67156.1 hypothetical protein
           B456_010G178200 [Gossypium raimondii]
          Length = 1004

 Score =  235 bits (599), Expect = 7e-67
 Identities = 121/196 (61%), Positives = 147/196 (75%), Gaps = 3/196 (1%)
 Frame = +2

Query: 341 RQSPPILDRFHLLLTERDEELR---GVDGXXXXXXXXXXVVRMYEEVLSELTVNSKPIIT 511
           +Q P I +RF  LL +R++ELR   GV            +V++YE VLSELT NSKPIIT
Sbjct: 10  KQLPSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIIT 69

Query: 512 ELTIIAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPE 691
           +LTIIAGEQR+H EGIADAIC+RI EV +E KLP+LYLLDSIVKNIG +YVRYF++RLPE
Sbjct: 70  DLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPE 129

Query: 692 VFFEVYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETD 871
           VF E Y QV P+L+PAM HLF TWS VFPP +L KIE Q +F+   N++ SG  S + ++
Sbjct: 130 VFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSE 189

Query: 872 SPSRPAHGIHVNPKYL 919
           SP RP HGIHVNPKYL
Sbjct: 190 SP-RPTHGIHVNPKYL 204


>XP_008784554.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
           homolog 4-like [Phoenix dactylifera]
          Length = 1063

 Score =  235 bits (600), Expect = 7e-67
 Identities = 134/239 (56%), Positives = 158/239 (66%), Gaps = 2/239 (0%)
 Frame = +2

Query: 212 MEEEGFFPIREKQPSSVNGTRSTFGSFPDRQRRAATPLDAVPTRQSPPILDRFHLLLTER 391
           ME+EG         SS    R   G  P R   AA P  A   R   PILDRF  +L ER
Sbjct: 1   MEDEGL-------SSSRGNPRFPQGDRPPRTAPAAEPQPATG-RLLQPILDRFRAMLRER 52

Query: 392 DEELRGVDGXXXXXXXXXX-VVRMYEEVLSELTVNSKPIITELTIIAGEQRDHAEGIADA 568
           +EELR   G           +VR+YEE+LSELT NSKPIITELTIIAG+    AEGIADA
Sbjct: 53  EEELREATGEDTPRPPTAGEIVRLYEELLSELTFNSKPIITELTIIAGQHLQFAEGIADA 112

Query: 569 ICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPEVFFEVYTQVTPSLYPAMHH 748
           IC R+ EV L+ KLP+LYLLDSIVKNIG +Y+RYFAARLP+VF E Y QV P+ YPAM H
Sbjct: 113 ICVRVLEVPLDQKLPSLYLLDSIVKNIGREYMRYFAARLPKVFCEAYNQVHPNQYPAMRH 172

Query: 749 LFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETDSPS-RPAHGIHVNPKYLE 922
           LF TW  VFP  +L KIE + +F+  ++ + SG  S R ++SPS RP+HGIHVNPKYLE
Sbjct: 173 LFGTWFQVFPLSVLRKIEDELQFSPSKSNQSSGITSMRRSESPSPRPSHGIHVNPKYLE 231


>XP_016683608.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Gossypium hirsutum]
          Length = 1024

 Score =  235 bits (599), Expect = 8e-67
 Identities = 121/196 (61%), Positives = 147/196 (75%), Gaps = 3/196 (1%)
 Frame = +2

Query: 341 RQSPPILDRFHLLLTERDEELR---GVDGXXXXXXXXXXVVRMYEEVLSELTVNSKPIIT 511
           +Q P I +RF  LL +R++ELR   GV            +V++YE VLSELT NSKPIIT
Sbjct: 10  KQLPSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIIT 69

Query: 512 ELTIIAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPE 691
           +LTIIAGEQR+H EGIADAIC+RI EV +E KLP+LYLLDSIVKNIG +YVRYF++RLPE
Sbjct: 70  DLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPE 129

Query: 692 VFFEVYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETD 871
           VF E Y QV P+L+PAM HLF TWS VFPP +L KIE Q +F+   N++ SG  S + ++
Sbjct: 130 VFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLHKIEMQLQFSQTGNQQSSGVTSLQSSE 189

Query: 872 SPSRPAHGIHVNPKYL 919
           SP RP HGIHVNPKYL
Sbjct: 190 SP-RPTHGIHVNPKYL 204


>KJB67158.1 hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 1024

 Score =  235 bits (599), Expect = 8e-67
 Identities = 121/196 (61%), Positives = 147/196 (75%), Gaps = 3/196 (1%)
 Frame = +2

Query: 341 RQSPPILDRFHLLLTERDEELR---GVDGXXXXXXXXXXVVRMYEEVLSELTVNSKPIIT 511
           +Q P I +RF  LL +R++ELR   GV            +V++YE VLSELT NSKPIIT
Sbjct: 10  KQLPSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIIT 69

Query: 512 ELTIIAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPE 691
           +LTIIAGEQR+H EGIADAIC+RI EV +E KLP+LYLLDSIVKNIG +YVRYF++RLPE
Sbjct: 70  DLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPE 129

Query: 692 VFFEVYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETD 871
           VF E Y QV P+L+PAM HLF TWS VFPP +L KIE Q +F+   N++ SG  S + ++
Sbjct: 130 VFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSE 189

Query: 872 SPSRPAHGIHVNPKYL 919
           SP RP HGIHVNPKYL
Sbjct: 190 SP-RPTHGIHVNPKYL 204


>XP_011459964.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Fragaria
           vesca subsp. vesca]
          Length = 948

 Score =  234 bits (597), Expect = 8e-67
 Identities = 121/211 (57%), Positives = 149/211 (70%)
 Frame = +2

Query: 287 SFPDRQRRAATPLDAVPTRQSPPILDRFHLLLTERDEELRGVDGXXXXXXXXXXVVRMYE 466
           +FP  +    T L   P     PI+DR+  LL +RD++LR              +V++YE
Sbjct: 12  AFPATKPMPITDLAPKPPPPPTPIVDRYKALLKQRDDDLRVSPDDDVSPPSTEEIVQLYE 71

Query: 467 EVLSELTVNSKPIITELTIIAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKN 646
            +LSEL  NSKPIIT+LTIIAGEQRDH +GIADAIC+RI EV +EHKLP+LYLLDSIVKN
Sbjct: 72  MLLSELVFNSKPIITDLTIIAGEQRDHGKGIADAICARILEVPVEHKLPSLYLLDSIVKN 131

Query: 647 IGCKYVRYFAARLPEVFFEVYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSG 826
           IG  YVRYF++RLPEVF E Y QV P+ + AM HLF TWS VFPP +L +IEAQ +F+  
Sbjct: 132 IGRDYVRYFSSRLPEVFCEAYRQVQPNQHSAMRHLFGTWSTVFPPSVLRRIEAQLQFSPQ 191

Query: 827 ENKKFSGAHSRRETDSPSRPAHGIHVNPKYL 919
            N++ SG    R ++SP RPAHGIHVNPKYL
Sbjct: 192 MNQQSSGLPPMRASESP-RPAHGIHVNPKYL 221


>XP_017645983.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Gossypium arboreum]
          Length = 1001

 Score =  234 bits (598), Expect = 9e-67
 Identities = 120/196 (61%), Positives = 147/196 (75%), Gaps = 3/196 (1%)
 Frame = +2

Query: 341 RQSPPILDRFHLLLTERDEELR---GVDGXXXXXXXXXXVVRMYEEVLSELTVNSKPIIT 511
           +Q P I +RF  LL +R++ELR   G+            +V++YE VLSELT NSKPIIT
Sbjct: 10  KQLPSISERFKALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELTFNSKPIIT 69

Query: 512 ELTIIAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPE 691
           +LTIIAGEQR+H EGIADAIC+RI EV +E KLP+LYLLDSIVKNIG +YVRYF++RLPE
Sbjct: 70  DLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPE 129

Query: 692 VFFEVYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETD 871
           VF E Y QV P+L+PAM HLF TWS VFPP +L KIE Q +F+   N++ SG  S + ++
Sbjct: 130 VFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSE 189

Query: 872 SPSRPAHGIHVNPKYL 919
           SP RP HGIHVNPKYL
Sbjct: 190 SP-RPTHGIHVNPKYL 204


>XP_016753658.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X3 [Gossypium hirsutum]
          Length = 1001

 Score =  234 bits (598), Expect = 9e-67
 Identities = 120/196 (61%), Positives = 147/196 (75%), Gaps = 3/196 (1%)
 Frame = +2

Query: 341 RQSPPILDRFHLLLTERDEELR---GVDGXXXXXXXXXXVVRMYEEVLSELTVNSKPIIT 511
           +Q P I +RF  LL +R++ELR   G+            +V++YE VLSELT NSKPIIT
Sbjct: 10  KQLPSISERFKALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELTFNSKPIIT 69

Query: 512 ELTIIAGEQRDHAEGIADAICSRIFEVSLEHKLPALYLLDSIVKNIGCKYVRYFAARLPE 691
           +LTIIAGEQR+H EGIADAIC+RI EV +E KLP+LYLLDSIVKNIG +YVRYF++RLPE
Sbjct: 70  DLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPE 129

Query: 692 VFFEVYTQVTPSLYPAMHHLFRTWSNVFPPPILGKIEAQFEFTSGENKKFSGAHSRRETD 871
           VF E Y QV P+L+PAM HLF TWS VF P +LGKIE Q +F+   N++ SG  S + ++
Sbjct: 130 VFCEAYRQVNPNLHPAMRHLFGTWSTVFSPSVLGKIEMQLQFSQTGNQQSSGVTSLQSSE 189

Query: 872 SPSRPAHGIHVNPKYL 919
           SP RP HGIHVNPKYL
Sbjct: 190 SP-RPTHGIHVNPKYL 204