BLASTX nr result
ID: Alisma22_contig00018245
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00018245
(1160 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AMQ10487.1 gag protein, partial [Equine infectious anemia virus] 61 1e-06
ADU02713.1 gag protein [Equine infectious anemia virus] 61 2e-06
ADU02707.1 gag protein [Equine infectious anemia virus] 61 2e-06
ADU02701.1 gag protein [Equine infectious anemia virus] 61 2e-06
OAO14126.1 hypothetical protein AV274_4193 [Blastocystis sp. ATC... 59 2e-06
AMQ10498.1 gag protein, partial [Equine infectious anemia virus] 60 2e-06
2BL6_A Chain A, Solution Structure Of The Zn Complex Of Eiav Ncp... 54 2e-06
AAK21105.1 gag protein [Equine infectious anemia virus] 60 3e-06
ADU02695.1 gag protein [Equine infectious anemia virus] 60 3e-06
ADU02641.1 gag protein [Equine infectious anemia virus] 60 3e-06
ADU02635.1 gag protein [Equine infectious anemia virus] 60 3e-06
ADU02719.1 gag protein [Equine infectious anemia virus] 60 3e-06
ADU02683.1 gag protein [Equine infectious anemia virus] 60 3e-06
ADU02659.1 gag protein [Equine infectious anemia virus] 60 3e-06
ADU02653.1 gag protein [Equine infectious anemia virus] 60 3e-06
ADK35863.1 gag protein [Equine infectious anemia virus] 60 3e-06
ADK35857.1 gag protein [Equine infectious anemia virus] 60 3e-06
ADK35845.1 gag protein [Equine infectious anemia virus] ADK35851... 60 3e-06
ADU02647.1 gag protein [Equine infectious anemia virus] 60 3e-06
AAK21111.1 gag protein [Equine infectious anemia virus] 60 3e-06
>AMQ10487.1 gag protein, partial [Equine infectious anemia virus]
Length = 486
Score = 61.2 bits (147), Expect = 1e-06
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRNPLTENRT--PDLQNHSVFPSLP 259
K CY C PGH +QC++ KVC++C++PGH QC+N +T FP
Sbjct: 381 KQTCYNCGKPGHLSSQCRAPKVCFKCKEPGHFSKQCKNAPKNGKTGAQGKPQKQTFPVQQ 440
Query: 258 KGRGPCTTSRYHLPKRASMSLSKLNED 178
KG S+ +R LS+L ++
Sbjct: 441 KGSLKANQSKEGQSQRLYPDLSQLRQE 467
>ADU02713.1 gag protein [Equine infectious anemia virus]
Length = 486
Score = 60.8 bits (146), Expect = 2e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ K+C+RC++PGH QCRN
Sbjct: 382 KQTCYNCGKPGHFSSQCKAPKICFRCKQPGHFSKQCRN 419
>ADU02707.1 gag protein [Equine infectious anemia virus]
Length = 486
Score = 60.8 bits (146), Expect = 2e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ K+C+RC++PGH QCRN
Sbjct: 382 KQTCYNCGKPGHFSSQCKAPKICFRCKQPGHFSKQCRN 419
>ADU02701.1 gag protein [Equine infectious anemia virus]
Length = 486
Score = 60.8 bits (146), Expect = 2e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ K+C+RC++PGH QCRN
Sbjct: 382 KQTCYNCGKPGHFSSQCKAPKICFRCKQPGHFSKQCRN 419
>OAO14126.1 hypothetical protein AV274_4193 [Blastocystis sp. ATCC 50177/Nand
II]
Length = 205
Score = 58.5 bits (140), Expect = 2e-06
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = -3
Query: 501 RHRRKSPSPSQEIPKRKPLYNI-PKNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQC 325
R+ K +++ P+RKP P+N+C+ C+ PGH CK+ VC RC +PGH+ C
Sbjct: 105 RNCHKPGHIARDCPERKPRRRFGPRNLCFRCLQPGHIARDCKNDVVCNRCEQPGHIARDC 164
Query: 324 RN 319
+N
Sbjct: 165 KN 166
>AMQ10498.1 gag protein, partial [Equine infectious anemia virus]
Length = 486
Score = 60.5 bits (145), Expect = 2e-06
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRNPLTENRT--PDLQNHSVFPSLP 259
K CY C PGH +QC++ KVC++C++PGH QC+N +T FP
Sbjct: 381 KQTCYNCGKPGHLSSQCRAPKVCFKCKEPGHFSKQCKNAPKNGKTGAQGKPQKQTFPVQQ 440
Query: 258 KGRGPCTTSRYHLPKRASMSLSKLNED 178
KG S+ +R LS++ ++
Sbjct: 441 KGSLKANQSKEGQSQRLYPDLSQIRQE 467
>2BL6_A Chain A, Solution Structure Of The Zn Complex Of Eiav Ncp11(22-58)
Peptide, Including Two Cchc Zn-Binding Motifs.
Length = 37
Score = 53.9 bits (128), Expect = 2e-06
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = -3
Query: 423 CYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
CY C PGH +QC++ KVC++C++PGH QCR+
Sbjct: 3 CYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRS 37
>AAK21105.1 gag protein [Equine infectious anemia virus]
Length = 400
Score = 60.1 bits (144), Expect = 3e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ KVC++C++PGH QCRN
Sbjct: 296 KQTCYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRN 333
>ADU02695.1 gag protein [Equine infectious anemia virus]
Length = 485
Score = 60.1 bits (144), Expect = 3e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ KVC++C++PGH QCRN
Sbjct: 382 KQTCYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRN 419
>ADU02641.1 gag protein [Equine infectious anemia virus]
Length = 485
Score = 60.1 bits (144), Expect = 3e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ KVC++C++PGH QCRN
Sbjct: 382 KQTCYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRN 419
>ADU02635.1 gag protein [Equine infectious anemia virus]
Length = 485
Score = 60.1 bits (144), Expect = 3e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ KVC++C++PGH QCRN
Sbjct: 382 KQTCYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRN 419
>ADU02719.1 gag protein [Equine infectious anemia virus]
Length = 486
Score = 60.1 bits (144), Expect = 3e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ K+C+RC++PGH QCRN
Sbjct: 382 KQTCYNCGKPGHFSSQCKAPKLCFRCKQPGHFSKQCRN 419
>ADU02683.1 gag protein [Equine infectious anemia virus]
Length = 486
Score = 60.1 bits (144), Expect = 3e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ KVC++C++PGH QCRN
Sbjct: 382 KQTCYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRN 419
>ADU02659.1 gag protein [Equine infectious anemia virus]
Length = 486
Score = 60.1 bits (144), Expect = 3e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ K+C+RC++PGH QCRN
Sbjct: 382 KQTCYNCGKPGHFSSQCKAPKLCFRCKQPGHFSKQCRN 419
>ADU02653.1 gag protein [Equine infectious anemia virus]
Length = 486
Score = 60.1 bits (144), Expect = 3e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ KVC++C++PGH QCRN
Sbjct: 382 KQTCYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRN 419
>ADK35863.1 gag protein [Equine infectious anemia virus]
Length = 486
Score = 60.1 bits (144), Expect = 3e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ KVC++C++PGH QCRN
Sbjct: 382 KQTCYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRN 419
>ADK35857.1 gag protein [Equine infectious anemia virus]
Length = 486
Score = 60.1 bits (144), Expect = 3e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ KVC++C++PGH QCRN
Sbjct: 382 KQTCYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRN 419
>ADK35845.1 gag protein [Equine infectious anemia virus] ADK35851.1 gag protein
[Equine infectious anemia virus]
Length = 486
Score = 60.1 bits (144), Expect = 3e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ KVC++C++PGH QCRN
Sbjct: 382 KQTCYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRN 419
>ADU02647.1 gag protein [Equine infectious anemia virus]
Length = 487
Score = 60.1 bits (144), Expect = 3e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ KVC++C++PGH QCRN
Sbjct: 384 KQTCYNCGKPGHFSSQCKAPKVCFKCKQPGHFSKQCRN 421
>AAK21111.1 gag protein [Equine infectious anemia virus]
Length = 400
Score = 59.7 bits (143), Expect = 3e-06
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = -3
Query: 432 KNVCYTCM*PGHWQAQCKSSKVCYRCRKPGHLISQCRN 319
K CY C PGH+ +QCK+ K+C++C++PGH QCRN
Sbjct: 296 KQTCYNCGKPGHFSSQCKAPKICFKCKQPGHFSKQCRN 333