BLASTX nr result

ID: Alisma22_contig00017446 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00017446
         (481 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002510609.1 PREDICTED: F-box/kelch-repeat protein At1g57790 [...    55   5e-06

>XP_002510609.1 PREDICTED: F-box/kelch-repeat protein At1g57790 [Ricinus communis]
           EEF52796.1 conserved hypothetical protein [Ricinus
           communis]
          Length = 406

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
 Frame = +3

Query: 96  DGLFLTRKYSNYDENGCN--SEGFVVFKLDTTSSQQPQWSIIESMNNAAFYFSGWN-WVS 266
           + L L  ++ NY  +G    +  F+V+KLD++SS    WS ++ + +  F F GWN + S
Sbjct: 263 EDLILVGRFRNYRVSGYEYQTHKFIVYKLDSSSSN---WSKLDGLGDMIF-FLGWNCFDS 318

Query: 267 FPTGNSPLCKGSNIYYPYVSGLVDYRQRNFVGYDIGVYNIEDGSFVRL 410
               N   C G+ IY+   + +VD    ++ G+D GV+N +DGS  RL
Sbjct: 319 ISAHNCGNCSGNCIYFTDDNFIVD-SDFSWEGHDYGVFNFDDGSVRRL 365


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